Abraham George Smith's Avatar

Abraham George Smith

@abe404

Postdoc | @DIKU_Institut | #RootPainter | Image Segmentation | Interactive Deep Learning | Phenotyping | OpenSource | Software developer | Scientist 🌱

28
Followers
26
Following
5
Posts
12.11.2024
Joined
Posts Following

Latest posts by Abraham George Smith @abe404

Transformers Outperform ConvNets for Root Segmentation: A Systematic Comparison Across Nine Datasets

www.biorxiv.org/content/10.6...

23.02.2026 18:27 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
Preview
Sounding out the deep: using AI and passive acoustic monitoring to reveal spatial and temporal patterns in deep-sea ecosystems

!PhD opportunity! Use #PassiveAcousticMonitoring + #AI to decode the soundscapes of #deep-sea habitats

πŸ“ University of Glasgow
πŸ”— shorturl.at/lcJIu
πŸ“† Internationals: 8 December
πŸ“† UK: 5 January

@sbohvm.gla.ac.uk @uofglasgow.bsky.social @tiffanyvlaar.bsky.social @abe404.bsky.social

29.10.2025 13:01 πŸ‘ 5 πŸ” 4 πŸ’¬ 0 πŸ“Œ 0
Post image

media.springernature.com/full/springe...

01.08.2025 12:30 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
Stomata morphology measurement with interactive machine learning: accuracy, speed, and biological relevance? | Plant Methods

Accurate, user-friendly, and free AI stomata quantification with RootPainter using corrective annotation. Works across species & imaging setups. rdcu.be/eyQzf

01.08.2025 12:25 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
Preview
Five seasons with DeepRootLab: A unique facility for easier deep root research in the field Deep-rooted crops accessing water and nutrients from deep soil layers enhance the resource base for crop production. However, studying these roots in field conditions is labor-intensive, limiting rese...

I enjoyed this collaboration with Eusun Han, Corentin ClΓ©ment, Weronika Czaban, Dorte Bodin DresbΓΈll and Kristian Thorup-Kristensen

I also believe the dataset and annotations we’ve made open-access will advance root analysis.
#openscience #phenotyping #rootpainter www.biorxiv.org/content/10.1...

22.04.2025 15:25 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
Post image

🌊 Fully funded #PhD opportunity! Become part of @netgain.bsky.social to develop novel, cutting-edge methods to track the effects of #Marine #Rewilding using #Bioacoustics, #Geospatial tools, & #SocioEconomic methods. Dive into the details below πŸ‘‡

www.findaphd.com/phds/project...

24.12.2024 11:51 πŸ‘ 3 πŸ” 3 πŸ’¬ 0 πŸ“Œ 0

New instructions for installing the RootPainter trainer (server) on windows 11 have been added to the GitHub repository.

16.01.2025 16:22 πŸ‘ 3 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
UmeΓ₯ Plant Science Centre - Postdoc fellowship to work on plant cell fate determination UmeΓ₯ Plant Science Centre - A centre of excellence for experimental plant biology in UmeΓ₯ Sweden. Β©UPSC

Please spread the word, 2-year-postdoc position in my group to understand fate determination.
www.upsc.se/jobs/6548-po...

11.12.2024 16:55 πŸ‘ 30 πŸ” 46 πŸ’¬ 0 πŸ“Œ 4