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Andrew Vaughn

@andrewhvaughn

Postdoc @ucsf-bchsi.bsky.social‬ with Tony Capra. PhD Berkeley with Rasmus Nielsen. ARGs, computational medicine, stat. computing, ancient DNA. https://github.com/avaughn271

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18.11.2024
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Latest posts by Andrew Vaughn @andrewhvaughn

My first preprint of my PhD! Thanks to @ekerdoncuff.bsky.social and @moorjanipriya.bsky.social for their guidance and mentorship in this project!

07.11.2025 00:28 👍 8 🔁 4 💬 0 📌 1
Registration - ProbGen 2026 Your Site Description

Happy to announce that registration and abstract submission for the Probabilistic Modeling in Genomics Conference at Berkeley in March 2026 is now open: probgen2026.github.io/registration.... Looking forward to a great conference full of exciting science!

10.10.2025 20:05 👍 0 🔁 0 💬 0 📌 0
Logo for the Genomic History Inference Strategies Tournament.

Logo for the Genomic History Inference Strategies Tournament.

If you're new to demographic history inference from population genomics, try this webapp I created to illustrate how dadi fits bottleneck models to site frequency spectra: ryangutenkunst-dadi-two-epoch.hf.space . It even outputs files for submitting to the GHIST competition! ghi.st

05.08.2025 18:48 👍 39 🔁 21 💬 1 📌 2
Redirecting

Glad to see this paper out on the genetic adaptations in the Haenyeo in response to their specialized diving lifestyle led by Diana Aguilar-Gómez. Very interesting population structure and selection analyses. Check it out! doi.org/10.1016/j.ce...

02.05.2025 21:20 👍 0 🔁 0 💬 0 📌 0
Talk describing the results of GHIST1 at ProbGen 25.
Talk describing the results of GHIST1 at ProbGen 25. YouTube video by Ryan Gutenkunst

Amid the chaos, it was great to share results from the first Genomic History Inference Strategies Tournament at ProbGen25. Watch the talk to learn about the future of GHIST and @andrewhvaughn.bsky.social's nefarious metagaming of demographic inference. 😀 www.youtube.com/watch?v=3_dv...

17.03.2025 15:53 👍 19 🔁 12 💬 1 📌 0

Always happy to game a little 😁. Thanks to all the organizers for putting this together!

09.12.2024 20:20 👍 10 🔁 1 💬 0 📌 0