Horacio V. Guzman's Avatar

Horacio V. Guzman

@gocompmodeling

Physicist and engineer, into multiple scale models of proteins/RNA/membranes, polymers, scientific computing, more --> http://tinyurl.com/goCompModeling

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04.12.2024
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Latest posts by Horacio V. Guzman @gocompmodeling

more to come! #glycotime

11.03.2026 03:50 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

This achievement reflects the outstanding teamwork and collaboration between the @icmabcsic.bsky.social , @uam.es , and @ifimacuam.bsky.social

#FrontCoverAlert #AdsorptionBiophysics #GlueLikeNature #compchemsky

11.03.2026 03:47 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Link to the paper: pubs.acs.org/doi/10.1021/...

Link to the code: github.com/pyF4all/2Dan...

The cover was created in (gluey) Blender by @willymenacho.bsky.social with key inputs from Antonio Bosch #ProudPI

11.03.2026 03:47 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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What's the role of glycans during adsorption on polarizable surfaces? Our work shows "dual capacity" acting either as a glue that enhances glycoprotein adsorption strength through dynamic-tethering patterns or as a blocking element that prevents protein-surface interactions #compchem @pubs.acs.org

11.03.2026 03:47 πŸ‘ 4 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0

Congrats! It has been bookmarked 🧢

11.03.2026 01:08 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
Preview
Characterizing the Conformational Dynamics of the Ribose Transporter B Protein in Escherichia coli: Enhanced Sampling via Multiple Force Fields We present a molecular dynamics simulation study of the E. coli ribose transporter protein B (RbsB), a conformationally labile protein found in the periplasm of the bacterium. The ribose transporter e...

Our latest paper in which we use multiple force fields to recover various conformations of the ribose transporter from E. coli. The work of DPhil student Nikolai Juraschko and postdoc Florencia Klein Rocha

pubs.acs.org/doi/full/10....

10.03.2026 16:33 πŸ‘ 16 πŸ” 7 πŸ’¬ 0 πŸ“Œ 0

Awesome results, hand-to-hand with this discoveries, lots of biophysics still need to be developed.... more to come🧬 🧢 πŸͺ‘!

09.03.2026 11:28 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

bookmarked!

23.02.2026 08:04 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
Jobs/internships/theses | Winz Lab - AK Winz

#PhDPosition open β€” #RibosomeBiology & #Translation QC
πŸ“ JGU Mainz, Germany
πŸ—“οΈ Apply by 10 Mar 2026 (or until filled)
πŸ”— Full details + project options:
πŸ‘‰ ak-winz.pharmazie.uni-mainz.de/jobs/

10.02.2026 08:02 πŸ‘ 8 πŸ” 10 πŸ’¬ 1 πŸ“Œ 0

My little outlook on how our lungs 🫁 are like the sea 🌊 is finally out in Central Science. Thanks to the support from incredible mentors @rommieamaro.bsky.social and @kprather.bsky.social !!

11.12.2025 12:18 πŸ‘ 12 πŸ” 8 πŸ’¬ 0 πŸ“Œ 0

bookmarked1

10.02.2026 09:01 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Bookmarked!

06.12.2025 07:59 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Those facts are mindblowing! Several region of Potosi limits with the Atacama desert are in distance not far, and have indeed awesome starry skies in common! The nonpolar map in 2D would be great to see as contour plots ,)

27.11.2025 14:26 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Amazing, however the driest, might be rather the Uyuni saltflats un Bolivia!? Cheers!

27.11.2025 06:17 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Congrats for the cool results, I am extremely interested in the transition from 3D right-handed helical motion to 2D clockwise .. I've bookmarked it! πŸͺ±

24.11.2025 14:36 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

p.s.: the magic link www.aidemos.meta.com/segment-anyt...

24.11.2025 14:13 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Not yet there for extracting a 3D model from a "picture image" and applying it to our #Proteins, #chompchmesky , #compchem; @Meta the protein was flatenned in the depth direction, otherwise would be great to track some Multiscale model AI mappings, and much more 🧬 🧢πŸͺ±

24.11.2025 14:12 πŸ‘ 3 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Thanks to the organizers for giving me the opportunity to present my lab' top-notch RNA models at multiple scales, including polymer physics(⚑ electrostatic and 🍦 mechanical properties) inputs and features of structural predictions with AI 🧡! #RNAtime #RNApuzzles #RNAmultiscaleSims #rnaProtInteract

19.11.2025 12:47 πŸ‘ 3 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0
Call for Applications: Early Career Rescue Fellowship – Freiburg Institute for Advanced Studies

Are you a postdoc stuck in the US?! Is your research stalled or are you in any way affected by the whims of that unfettered madman? Interested in MD simulations of large biomolecules?!

Consider joining me at the University of Freiburg!

uni-freiburg.de/frias/call-f...

17.11.2025 08:51 πŸ‘ 16 πŸ” 16 πŸ’¬ 0 πŸ“Œ 0

BA.3.2 in Rheinland Pfalz πŸ‡©πŸ‡ͺ... most likely Hessen too... #compchemsky, #compchem, #goViralAgain #physVirology #compVirology

10.11.2025 16:01 πŸ‘ 2 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

good timing for the new project in the BIM Lab!!! thanks for sharing

04.11.2025 08:35 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

**Job Alert** Exciting postdoc position available: theoretical and experimental cryo-EM studies of flexible biomolecules. Competitive salary, collaborative environment at NYSBC and Flatiron Institute. Please share!! and contact: pcossio@flatironinstitute.org

22.10.2025 14:55 πŸ‘ 14 πŸ” 18 πŸ’¬ 0 πŸ“Œ 0

The full scope of glycan dynamics in modulating surface affinity will be presented shortly (soon)! # 𝔾𝕝π•ͺ𝕔𝕠-𝕒𝕕𝕀𝕠𝕣𝕑π•₯π•šπ• π•Ÿ #glycoAdsorptionTime 2++

21.10.2025 16:19 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

The polarizable surface provides the perfect π”½π• π•žπ•šπ•₯𝕖 model to spatially & rapidly quantify the effect of mutations at the interface, by identifying how singular &/or collective residues can drastically modulate the glycoprotein adsorption strength on surfaces 2/2 #compchem #compchemsky #glycotime

21.10.2025 16:19 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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πŸ“£ Check out our 𝔾𝕝π•ͺ𝕔𝕠-𝕒𝕕𝕀𝕠𝕣𝕑π•₯π•šπ• π•Ÿ on π”½π• π•žπ•šπ•₯𝕖𝕀
Preprint! doi.org/10.1101/2025... We highlight glycans’ dual capacity, to act either as a glue that dominates the whole glycoprotein adsorption strength via tethering, or as a blocking element preventing adsorption 1/2 #glycanResearch #glycanAsGlues 🩹🧡🦠

21.10.2025 16:19 πŸ‘ 3 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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After 4 days of listening to top-notch experts in the field of glycoprotein/membrane interactions. I want to say big thanks to @rommieamaro.bsky.social @biophysmatt.bsky.social @rocovino.bsky.social and AtilioV & @giorgiocolombo.bsky.social for hosting me as a speaker and also poster presenter* 2!

10.09.2025 16:58 πŸ‘ 4 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

awesome, and very helpful to the computational biophysist!🧢πŸͺ‘

06.08.2025 12:23 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Participate in Capri, BTW are glycan-protein complexes also tackled?

29.07.2025 09:39 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Congrats, sounds like a very challenging question! I've bookmarked the Preprint! Could you share some trajectories πŸ’ΎπŸ‘?

24.07.2025 09:07 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Same question here!

24.07.2025 09:03 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0