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Matti Pronker

@mfpronker

Junior group leader @Sanquin-forlife.bsky.social - Structural biology, protein engineering, #cryoEM โ„๏ธ๐Ÿ”ฌ, #crystallography ๐Ÿ’Ž - views are my own

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04.10.2023
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Latest posts by Matti Pronker @mfpronker

Is there PFAS in baking paper a.k.a. grease-proof? It isn't food so no ingredients are listed. A.I. says there might be. Wouldn't that be pretty insane as you are literally cooking your food on it? Same question for 'wax' programs in car wash stations, shouldn't this be banned??

17.02.2026 22:05 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
Research Group Leader Tenure Track - Structural Studies - LMB 2775 - Medical Research Council Location: Cambridge. Vacancy: Research Group Leader Tenure Track - Structural Studies - LMB 2775. Closing Date: 16/03/2026, 23:55

Please spread the word: the Structural Studies Division @mrclmb.bsky.social is looking for a new tenure-track, independent group leader with an exciting plan in any area of Structural (Molecular & Cell) biology, in discovery biology and/or methods development. ๐Ÿฅณ

mrc.tal.net/vx/mobile-0/...

16.02.2026 12:09 ๐Ÿ‘ 83 ๐Ÿ” 106 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 2
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In memoriam: Hans Vliegenthart In memoriam: prof. dr. Hans Vliegenthart (April 7, 1936 โ€“ February 12, 2026)

With sadness we share the passing of em. prof. dr. Hans Vliegenthart, founder of the Bijvoet Centre for Biomolecular Research at Utrecht University. His scientific legacy will continue to inspire.
In memoriam: www.uu.nl/en/news/in-m...

17.02.2026 11:10 ๐Ÿ‘ 4 ๐Ÿ” 3 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Happy lunar new year to all those who celebrate!! ๐Ÿด

17.02.2026 07:38 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Cover of Dutch chemistry magazine C2W featuring a quotr by scientific director of the Netherlands Cancer Institute (NKI).

Cover of Dutch chemistry magazine C2W featuring a quotr by scientific director of the Netherlands Cancer Institute (NKI).

'New research mostly starts with the arrival of junior group leaders'. Amen Thijn Brummelkamp!! ๐Ÿ™

15.02.2026 11:02 ๐Ÿ‘ 3 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Thanks Joost!!

11.02.2026 20:10 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Thanks Dina!!

11.02.2026 08:18 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Protein engineering and structural biology To understand how proteins function, we need to know their three-dimensional structure. We use two techniques to determine such 3D structures of proteins and their complexes: X-ray crystallography and...

It feels official now... www.sanquin.nl/en/researche...

10.02.2026 21:57 ๐Ÿ‘ 15 ๐Ÿ” 2 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
Smiling headshot of Matti Pronker

Smiling headshot of Matti Pronker

Congratulations to former LMB postdoc @mfpronker.bsky.social, who is launching his own independent research group at Sanquin Research where he'll use protein engineering and structural biology techniques to study important blood protein complexes.
Best of luck to you Matti!
#LMBAlumni

05.02.2026 13:04 ๐Ÿ‘ 12 ๐Ÿ” 3 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Would recommend, Elena does fantastic science!!

04.02.2026 09:46 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Structure of a FLAG peptide bound to anti-FLAG M2 as determined by X-ray crystallography

Structure of a FLAG peptide bound to anti-FLAG M2 as determined by X-ray crystallography

I am excited to share that I will be starting my lab @Sanquin-forlife Research in Amsterdam this month! Looking forward to do structural biology and use protein engineering to tackle important questions related to ๐Ÿฉธblood๐Ÿฉธ protein complexes in health and disease.
๐Ÿงฌ๐Ÿงซ๐Ÿ”ฌ๐Ÿงช๐Ÿ‘จโ€๐Ÿ”ฌ
#cryoEM #xtallography

01.02.2026 12:53 ๐Ÿ‘ 31 ๐Ÿ” 3 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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Multiple protein structure alignment at scale with FoldMason Protein structure is conserved beyond sequence, making multiple structural alignment (MSTA) essential for analyzing distantly related proteins. Computational prediction methods have vastly extended ou...

FoldMason is out now in @science.org. It generates accurate multiple structure alignments for thousands of protein structures in seconds. Great work by Cameron L. M. Gilchrist and @milot.bsky.social.
๐Ÿ“„ www.science.org/doi/10.1126/...
๐ŸŒ search.foldseek.com/foldmason
๐Ÿ’พ github.com/steineggerla...

30.01.2026 06:11 ๐Ÿ‘ 300 ๐Ÿ” 147 ๐Ÿ’ฌ 4 ๐Ÿ“Œ 3

*DYKDDDDK ๐Ÿ˜‰

19.01.2026 11:12 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Post image Post image

Just got this in the mail from @addgene.bsky.social, recognizing that 100+ labs have now ordered our anti-FLAG-M2 plasmids via their service. @mfpronker.bsky.social
www.addgene.org/Joost_Snijder/
pubs.acs.org/doi/full/10....

19.01.2026 11:09 ๐Ÿ‘ 31 ๐Ÿ” 6 ๐Ÿ’ฌ 2 ๐Ÿ“Œ 0

Let's make 2026 a great year!!! โœŠ๏ธ๐Ÿ’š

01.01.2026 11:05 ๐Ÿ‘ 2 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Happy holidays everybody!! ๐ŸŒฒ

25.12.2025 20:58 ๐Ÿ‘ 3 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Post image Post image Post image

#EMBOComp3D has officially begun! ๐Ÿฅณ What are you looking forward to in the next few days?

02.12.2025 12:36 ๐Ÿ‘ 3 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Congrats Dan!!!

02.12.2025 14:19 ๐Ÿ‘ 1 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Only 22 min delay on the first leg of the journey ๐Ÿ˜ฌ thankfully still in time for train 2/2

02.12.2025 09:52 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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a man in a green shirt is sitting on a couch and eating a bag of food . Alt: a man in a green shirt is sitting on a couch and trying to stop hyperventilating

What is the German word for being anxious and sleepy at the same time? About to enter the German railway network, wish me luck!!

02.12.2025 06:48 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
ICE train interior

ICE train interior

On the train to Heidelberg for the @EMBO workshop #computational_structural_biology, excited to hear about the latest developments in the field and share some recent work!

02.12.2025 06:30 ๐Ÿ‘ 3 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
Sunrise

Sunrise

Utrecht 2025

01.12.2025 07:33 ๐Ÿ‘ 2 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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#LifeHack

21.11.2025 17:11 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

@hannes-stark.bsky.social @gcorso.bsky.social

20.11.2025 11:34 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Has anybody noticed how #Boltzgen does not output pLDDT in the ADP column of the output .cif files in the way Boltz1/2, AF2/3, Chai1 etc do? Especially weird since it uses Boltz2 to generate these models, has it been taken out to speed up calculations? Preprint doesn't mention it.

20.11.2025 11:33 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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Wilkinson Lab We discover and study reverse transcriptases

The Wilkinson Lab is open for science! @mskcancercenter.bsky.social

๐ŸงฌWe'll be finding funky new RNA biology, mainly by looking at reverse transcriptases (i.e. the Best Enzymes In The World)๐Ÿงฌ

annnd: I'm hiring - come join! Especially postdocs and PhD students - please get in touch (NYC is great)

31.10.2025 19:00 ๐Ÿ‘ 99 ๐Ÿ” 46 ๐Ÿ’ฌ 5 ๐Ÿ“Œ 3

This year, for Postdoc Appreciation Week, could we please STOP referring to them as TRAINEES!

They are exceptionally qualified professionals, highly experienced researchers, mentors, educators, world-leading experts in their field, grownups with responsibilities, not interns!

17.09.2025 19:08 ๐Ÿ‘ 4 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Has anybody solved this conundrum?

13.09.2025 20:43 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

As it's the season, 3 options for those wishing to cook pumpkin:
1. Suffer when trying to peel a raw pumpkin
2. Boil the pumpkin with skin on (skin comes of easily), suffer when trying to clean the pot later
3. Suffer when eating the awful pre-cut pumpkin (fridge or frozen)ย ๐Ÿฅด

13.09.2025 20:42 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0

Isopeptide bond?

12.09.2025 19:55 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0