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Lucia Kusumawati

@luciakusumawati

Biologist with interest in plant-microbe interactions, plant stress, pest, microbiome, proteomics & phytochemistry/metabolites | SouthEast Asian I often put my initials (LK) in my files, it's not country code

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16.11.2024
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Latest posts by Lucia Kusumawati @luciakusumawati

Thank you!

08.04.2025 15:15 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Happy birthday!

24.02.2025 02:31 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Congrats! Great story & beautiful confocal micrographs and EM images!

10.02.2025 13:17 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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spongebob holding a megaphone with the words we need help behind him ALT: spongebob holding a megaphone with the words we need help behind him

Dear #plantsci community, PLEASE HELP or RT! We are looking for a leaf specific promoter for a tissue specific CRISPR experiment in Arabidopsis. Any suggestions?

07.02.2025 08:32 πŸ‘ 22 πŸ” 49 πŸ’¬ 5 πŸ“Œ 1

straw man argument is often the loudest here..

29.01.2025 23:59 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
Genomic information pathways and their numerical linkages in relation to the Central Dogma. The boxes show different omic levels in Col-0 and Can-0. Black arrows indicate the flow of information implied by the Central Dogma starting from CDS (peach) via gbM (green) to mRNA (light blue), ribosome-associated mRNA (yellow) and finally protein (pink). The strength of Pearson correlation between levels is shown both by the numbers and by the thickness of the corresponding black arrows, and represents the correlation between quantitative expression levels (except in the case of CDS where is represents the correlation derived from the multiple regression codon frequency model, i.e. the square root of the fraction of variance explained). The merged arrows connecting CDS, gbM and mRNA to protein show the result of combining information into a single model; note that their combined correlation of 0.720 is less than the sum of their individual effects. The correlation of tRNA levels (lilac) with genome-wide codon and amino acid frequencies is shown on the left. The correlations between corresponding Col-0 and Can-0 omic levels are shown next to the grey double-headed arrows.

Genomic information pathways and their numerical linkages in relation to the Central Dogma. The boxes show different omic levels in Col-0 and Can-0. Black arrows indicate the flow of information implied by the Central Dogma starting from CDS (peach) via gbM (green) to mRNA (light blue), ribosome-associated mRNA (yellow) and finally protein (pink). The strength of Pearson correlation between levels is shown both by the numbers and by the thickness of the corresponding black arrows, and represents the correlation between quantitative expression levels (except in the case of CDS where is represents the correlation derived from the multiple regression codon frequency model, i.e. the square root of the fraction of variance explained). The merged arrows connecting CDS, gbM and mRNA to protein show the result of combining information into a single model; note that their combined correlation of 0.720 is less than the sum of their individual effects. The correlation of tRNA levels (lilac) with genome-wide codon and amino acid frequencies is shown on the left. The correlations between corresponding Col-0 and Can-0 omic levels are shown next to the grey double-headed arrows.

Happy to start 2025 by sharing our new preprint biorxiv.org/cgi/content/... -the first paper from our BBSRC collaborative project with
@richardmott.bsky.social and Kathryn Lilley to understand what controls protein abundance in plants. 🧡 1/9

13.01.2025 15:42 πŸ‘ 44 πŸ” 15 πŸ’¬ 4 πŸ“Œ 1
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Otherworldly: Echium wildpretii on its native Mount Teide ✨

Tenerife, 2021

26.01.2025 16:16 πŸ‘ 60 πŸ” 4 πŸ’¬ 1 πŸ“Œ 0

If you see this quote with flowers from your gallery.
We can all use some beauty right now. Epiphyllum oxypetalum

26.01.2025 09:55 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Important to listen this, especially for those who use other people proposal draft idea (which should be confidential) for their preprint without asking -- do everything for their preprint just because they have more power, even if it is not ethical? what kind of integrity is that?

19.01.2025 14:23 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
'Ubiquitin Lysine-Linkages' from the review 'Ubiquitin: a structural perspective' in Molecular Cell

'Ubiquitin Lysine-Linkages' from the review 'Ubiquitin: a structural perspective' in Molecular Cell

New to #ubiquitin? Been with it for a while? Either way this review may be for you 🀩

Excited to share our review article in @molcell.bsky.social, diving deep into everything #ubiquitin
Read here πŸ‘‰: kwnsfk27.r.eu-west-1.awstrack.me/L0/https:%2F...

@cellpress.bsky.social
@wehi-research.bsky.social

17.01.2025 02:19 πŸ‘ 57 πŸ” 23 πŸ’¬ 1 πŸ“Œ 0
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Imaging reveals how plants cope with salt Imaging insights into how plants handle toxic levels of sodium ions.

See also the News&Views @nature.com that Antony van der Ent and I wrote (free access link rdcu.be/d6mbB) @pph-wur.bsky.social @w-u-r.bsky.social
www.nature.com/articles/d41...

16.01.2025 08:16 πŸ‘ 19 πŸ” 11 πŸ’¬ 0 πŸ“Œ 0
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Elemental cryo-imaging reveals SOS1-dependent vacuolar sodium accumulation - Nature This study demonstrates that cryo nanoscale secondary ion mass spectrometry (CryoNanoSIMS) enables direct multi-elemental imaging at subcellular resolution of macro- and micronutrients or trace elemen...

Most plants can`t handle salt, but have evolved strategies to survive in it. How do they do it?🌱πŸ§ͺ

Excited to share some of our first insights using a new cryoelemental imaging technique to answer these questions at the subcellular scale!(1/8)
www.nature.com/articles/s41... @nature.com #PlantScience

16.01.2025 14:51 πŸ‘ 103 πŸ” 54 πŸ’¬ 9 πŸ“Œ 3
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Happy to share our latest @biorxiv-plants.bsky.social led by @manuelgonzalezfuen.bsky.social β€œEffector-triggered processing body formation attenuates host translation via ER stress responses and autophagy upon bacterial infection” #proteostasis #plantimmunity 🧡(1/16)
www.biorxiv.org/content/10.1...

14.01.2025 16:34 πŸ‘ 118 πŸ” 60 πŸ’¬ 4 πŸ“Œ 3
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Elemental cryo-imaging reveals SOS1-dependent vacuolar sodium accumulation - Nature This study demonstrates that cryo nanoscale secondary ion mass spectrometry (CryoNanoSIMS) enables direct multi-elemental imaging at subcellular resolution of macro- and micronutrients or trace elemen...

This is a truly awesome story by @priyaramakrishna.bsky.social & @nikogeldner.bsky.social et al. #CryoSEM imaging of elements!!! They just opened the floodgates for many many cool discoveries!!! www.nature.com/articles/s41...

15.01.2025 20:47 πŸ‘ 74 πŸ” 29 πŸ’¬ 3 πŸ“Œ 2

It is not supposed to fill a gap in someone else's preprint or worse

12.01.2025 11:01 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

A research draft sent for feedback should be confidential

12.01.2025 06:12 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 1