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Tagir Akhmetshin

@tagirshin

PhD in #chemoinformatics & Chemoinformatics data engineer @ Qubit Pharmaceuticals #compchem #ML (My Views)

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25.11.2024
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Latest posts by Tagir Akhmetshin @tagirshin

Check out our pre-print on an interpretable ML pipeline using a Wasserstein Autoencoder & Generative Topographic Mapping for designing anti-biofilm peptides. Experimentally validated peptides show up to 10x improved IC50 against MRSA biofilms vs. reference standards. More soon! #peptides #AMPs

07.12.2024 11:03 ๐Ÿ‘ 14 ๐Ÿ” 4 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Introducing Synthon Searching โ€“ RDKit blog Searching unreasonably large chemical spaces in reasonable amounts of time.

There's a new #RDKit blog post introducing some new functionality that I'm really excited about: doing efficient substructure and similarity searches in very large chemical libraries:
greglandrum.github.io/rdkit-blog/p...
#ChemSky

03.12.2024 07:21 ๐Ÿ‘ 97 ๐Ÿ” 29 ๐Ÿ’ฌ 2 ๐Ÿ“Œ 2

Here's a Cheminformatics Starter
pack! Let me know if you would like to be added! And more importantly, do encourage people to join the blue skies :D

17.11.2024 04:43 ๐Ÿ‘ 74 ๐Ÿ” 21 ๐Ÿ’ฌ 31 ๐Ÿ“Œ 1
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The first paper from the Small Molecule Steering Committee at Polaris introduced practical guidelines for method comparison in ML-driven drug discovery.

We'll be discussing this live on Dec 5th from 11 - 12 PM ET.

Join the convo: portal.valencelabs.com/events/post/...

25.11.2024 17:07 ๐Ÿ‘ 13 ๐Ÿ” 7 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 3

Hi, nice work! Could you add me too, please? Thanks!

01.12.2024 10:51 ๐Ÿ‘ 1 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0