My new chapter of Better Code, Better Science on AI-assisted coding is now complete! It's been completely revised in an attempt to futureproof it. Comments welcome. bettercodebetterscience.github.io/book/ai-codi...
netneurotools: a trainee-oriented approach to network neuroscience | doi.org/10.1101/2025...
Our lab’s internal toolkit for accomplishing everyday tasks in brain imaging ⤵️
So thrilled to see our pre-print online. This was an incredible team effort and I am so proud to have been part of this amazing study, special thanks goes to @nickywhiffin.bsky.social and @gregfindlay.bsky.social for their mentorship. Go check-out Nicky's thread hereunder:
TL;DR: Brain morphometry at 64mT (= 0.064T) is very much feasible. Perhaps most interesting is the fact that the dataset -> ~ T1w & T2w scans x (4 resolutions x 2 Hyperfine Swoop 64 mT scanners + GE 3T scanner) x 23 adult participants = 390 scans -> is openly available: openneuro.org/datasets/ds0...
Finally, work by collaborators; ULF-HF correspondence at the FreeSurfer vertex level, by Charlotte Pretzsch et al: www.nature.com/articles/s42... | And recent brain-chart work feat. ULF MRI (SI Fig. S36) by Lena Dorfschmidt @aarona-b.bsky.social et al: doi.org/10.1101/2025... Watch this space! [5/5]
More recent by Levi: Generalised-Hilbert Mamba for Super-resolution (GAMBAS), still for paediatric ultra-low-field MRI: arxiv.org/abs/2504.04523 | The updated multi-input GAMBAS+ recently won 1st place at the MICCAI ULF Enhancement Challenge: www.synapse.org/Synapse:syn6... (paper online soon) [4/n]
Early work by PhD student Levi Baljer on super-resolution of paediatric ultra-low-field MRI using a 3D UNet: doi.org/10.1002/hbm...., and related work (without paired high-field scans) by BSc student Ula Briski: doi.org/10.1101/2024... [3/n]
Thanks to Carly Bennallick @kingspfig.bsky.social @spinicist.bsky.social @leechbrain.bsky.social & (many) others for help & funders @nihr.bsky.social @gatesfoundation.bsky.social | Lots more in the works, using these & other scans. Some examples of our other recent work on ultra-low-field MRI: [2/n]
Ultra-low-field brain MRI morphometry: T-RT reliability and correspondence to high-field MRI | doi.org/10.1162/IMAG... | w/ !! FREE DATA !! T1w & T2w scans of 23 healthy participants from 3T GE Premier & 2x 64mT Hyperfine Swoop in many resolutions, i.e. 390 scans! openneuro.org/datasets/ds0... [1/n]
🚨 New Preprint 🚨
Targeting intracranial electrical stimulation (ES) to network regions defined within individuals causes network-level effects
By Cyr et al.
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Q: Can we use individualized network maps from precision fMRI to modulate a targeted network via intracranial ES?
A: Yes!
🧵:
Hi world - its been a hard year with #cancer meaning I missed out lots of fun things. It would mean a lot if you checked out my new album of tracks. Out on all platforms including #Soundcloud (free). Let me know which tracks you like and a special prize if you work out the two levels to the project
Hello Scientists. If you want a glimpse of the future, why not check out the new album by Natural Philosophers With Attitude. Science radio has never been this good. Please give it a spin and share it with your science friends.
Spotify link 👇
open.spotify.com/album/7cpbVH...
youtu.be/k2os8ZKKheE
Brain video 33:
#brain #blender #geometrynodes
Lorenz Attractor
Postdoctoral Research Associate position available with Tom Booth and me, to develop and validate an AI tool for automatic triaging of Hyperfine portable ultra-low-field MRI brain scans of patients into normal and abnormal: www.kcl.ac.uk/jobs/089745-... | @kcl.ac.uk
Come to Neuroimaging Statistics at @OHBM, June 20-21! The Keith Worsley lecture will be given by Michael I. Miller, keynote lecture by Paul M. Thompson, and many other talks from the interface of statistics and neuroimaging. Registration free but required sites.google.com/view/neuroim...
For years we have tended to discount activation signals in the white matter as artifact. It's becoming clear now that this was a mistake - white matter shows stimulus-driven activation similar (though much smaller) to gray matter. pubmed.ncbi.nlm.nih.gov/37824529/
Brain Connectivity Workshop recordings (& schedule) are online – including short talks and extensive discussions, focused on connectomics and mental health. | It was a stimulating meeting, and Wellcome were a wonderful co-organiser and host! | Enjoy: www.wellcomeevents.org/wellcome/fro...
