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@paveltomancak

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02.03.2025
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Latest posts by @paveltomancak

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eLife Fallout When a prestigious journal scrapped accept-reject decisions on submitted papers, some scientists rebelled, and the editor-in-chief was fired.

This account of the eLife saga will provoke much debate. One aspect isn't accurate: eLife wasn't "designed as an experiment in removing gatekeepers". The original intent was to publish "outstanding papers" but have the gatekeepers be academic not professional editors 1/2 nikomc.com/2026/03/05/e...

10.03.2026 18:59 👍 41 🔁 15 💬 9 📌 4

Happy to announce I've launched a new service for the fly community: flyRoom, a web-based comprehensive stock manager for all your fly pushing needs. Organise all your stocks, maps all your genotypes, plan your crosses, print and scan your labels. Give it a try and let your colleagues know!

10.03.2026 15:50 👍 27 🔁 14 💬 3 📌 2
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Thanks to #Appose hackaton with @jytinevez.bsky.social, @ctrue.bsky.social, @nkiaru.bsky.social, @msphan.bsky.social, @strigaud.bsky.social, Carlos, Thomas and Julie, DeXtrusion can be **INSTALLED** and run to detect cell extrusions directly from Fiji 🤩! Appose is amazing

10.03.2026 12:58 👍 16 🔁 8 💬 1 📌 1
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Seen @TrainingVbc nice to link that to Mendel but actually is a thought expressed by Gustav Mahler about his music which, surprisingly, had a similar fate to the most famous peas in the world.

10.03.2026 08:38 👍 4 🔁 1 💬 0 📌 0
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Pasteur course Advanced Bioimage Analysis with Artificial Intelligence (AI) - 2026 - Research Topics The course has a specific focus on hands-on and interactive tutorials. They are meant to be convivial and foster a collaborative atmosphere between students and teachers. Each day begin with a ...

1/ The Advanced Bioimage Analysis with Artificial Intelligence course.

This course inherits from the NEUBIAS courses, and is now in its 3rd installment, with a new name

research.pasteur.fr/en/course/ne...

09.03.2026 16:23 👍 5 🔁 5 💬 1 📌 0

Whelp, it was nice while it lasted. Where are we going next?

09.03.2026 19:19 👍 1 🔁 3 💬 0 📌 0
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Do you have a great idea for starting a company? Would you like advice on how to pitch to potential investors? Join us for the EMBO #webinar on 1 April at 16–17:00 CET. 🧪

Register here:
https://embo-org.zoom.us/webinar/register/WN_7SLofSfuTPewgC2VZQVIUw#/registration #startup

09.03.2026 15:05 👍 4 🔁 7 💬 2 📌 0
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🔬✨ For #IWD2026, we’re highlighting the voices of #WomenInScience!

In our short interview with Dr. Anna Czarkwiani @aniaczark.bsky.social shares what might surprise teenagers about a career in research and the skills that shaped her journey.

Read more ➡️ tud.link/yjts9v

#CMCB #TUDresden

08.03.2026 09:30 👍 8 🔁 3 💬 0 📌 0
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We have just published 2,474,166 records of plant species occurrences from the Czech Vegetation Database in GBIF: doi.org/10.15468/94b...
These records represent 74% of the plant occurrence data and 30% of all organism occurrence data in the GBIF database for the territory of the Czech Republic.

09.03.2026 14:22 👍 10 🔁 4 💬 0 📌 0
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Congratulations to Stephen Cusack, EMBO Member since 1998, for receiving the 2026 Lennart Philipson #Award! 🧪

More info here:
https://www.embl.org/news/awards-honours/announcing-the-2026-embl-alumni-award-recipients/

06.03.2026 08:22 👍 9 🔁 3 💬 0 📌 0

Major plot twist in the Firefly TV series and Serenity movie

06.03.2026 06:03 👍 28 🔁 3 💬 1 📌 0
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New research group at the CRTD @tudresden.bsky.social !🎉🔬

Supported by the ERC Starting Grant, Dr. Anna Czarkwiani @aniaczark.bsky.social is launching a new group to study the sense of gravity and #regeneration in the inner ear in axolotl.

Read more ➡️ tud.link/buva24

#CMCBnews

05.03.2026 09:30 👍 15 🔁 6 💬 0 📌 0
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Even more excited — our paper is featured on the cover of Science Advances!

Huge thanks to @alexandrejan.bsky.social who took this incredible photo of a ctenophore (aka comb jelly) and the editors.

Here’s the cover 👇

www.science.org/doi/10.1126/...

04.03.2026 20:54 👍 89 🔁 24 💬 3 📌 2
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🚨 New paper from our lab just published in Nature🚨

www.nature.com/articles/s41...

Discover how 🌱 tumour formation is shaped by tissue context from the very beginning. Cancer is not driven by genetics alone

✨Fantastic team led by Greta Skrupskelyte, Eduardo Rojo, @hariajith.bsky.social

04.03.2026 16:08 👍 95 🔁 37 💬 9 📌 7
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DO NOT MISS the opening session of #DROS26 this evening - beginning at 7pm.

You are going to be in for a treat listening to @lucksmith.bsky.social and Tara Finnegan perform "The fly song"

#Drosophila

04.03.2026 22:32 👍 23 🔁 5 💬 4 📌 0

Politruk. Been there…

04.03.2026 19:03 👍 1 🔁 0 💬 0 📌 0
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The oldest articulated bony fish from the early Silurian period - Nature A tiny, articulated, near-complete osteichthyan from the early Silurian Chongqing Lagerstätte, represents the oldest osteichthyan occurrence including microfossils, and the earliest articulated remain...

Meet Eosteus, a tiny bony fish from the Silurian - paper in @nature.com www.nature.com/articles/s41...

04.03.2026 17:46 👍 14 🔁 2 💬 1 📌 2
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Largest Silurian fish illuminates the origin of osteichthyan characters - Nature New findings from articulated head and trunk material of Megamastax amblyodus yield previously unseen morphological details of a Silurian stem osteichthyan.

Megamastax, a mighty chew from the Silurian - paper in @nature.com www.nature.com/articles/s41...

04.03.2026 17:47 👍 29 🔁 8 💬 0 📌 3
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is there a direct crosstalk between actin and vimentin intermediate filaments? Our work shows that vimentin promotes actin assembly by stabilizing ATP-subunits at the barbed end.
Fantastic work done by @lilianpaty.bsky.social with @romet-jegou-lab.bsky.social

www.biorxiv.org/content/10.1...

24.11.2025 10:15 👍 42 🔁 18 💬 0 📌 1
MIND POPS | Florian Jug - Human Technopole
MIND POPS | Florian Jug - Human Technopole YouTube video by MIND Milano Innovation District

🤖 How can #AI unlock the full potential of biological data?

🔬 Our @florianjug.bsky.social develops advanced AI methods to help life scientists extract deeper insights into health and disease within the MIND innovation ecosystem.

Watch the interview 👉 www.youtube.com/watch?v=ucZl...

04.03.2026 08:02 👍 9 🔁 3 💬 0 📌 1
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2026 has been a remarkable year for me so far (despite the current world events): opening my lab at the University of Zurich, assembling an amazing group of people in the group, and celebrating it with a fantastic lab warming party. Figured it's also time for a small profile refresh.

03.03.2026 22:46 👍 41 🔁 10 💬 1 📌 0
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With Eugene Koonin, we propose a concept of “the selfish ribosome”, under which evolution of life is viewed as a ribosomal takeover, where the ribosome evolved to consume most of the cell’s resources, while other cellular componentry ensures the propagation of the ribosome. arxiv.org/abs/2602.23268

03.03.2026 08:58 👍 223 🔁 96 💬 5 📌 13
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Congratulations, Lisa Maier and Stephen Cusack!

The two EMBL alumni have received the 2026 John Kendrew and Lennart Philipson awards for their outstanding contributions to host–microbiome research and structure-guided drug development, respectively.

Learn more: www.embl.org/news/awards-...

03.03.2026 10:04 👍 31 🔁 5 💬 0 📌 1

We are very excited to share a new resource from our team: spatial subcellular proteome maps in plants! We developed an MS-based method that registers localizations of about 8000 proteins in Arabidopsis roots in a single experiment.

(1/9)
www.biorxiv.org/cgi/content/...

03.03.2026 06:53 👍 112 🔁 68 💬 2 📌 1
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Wonderful to be part of exciting Program at Harvard University & CMSA, Mathematics &Biology: Morphometry, Morphogenesis and Mathematics. Thank you 🙏🏼 and congrats to organizers for their invitation. Great to see and discuss with wonderful colleagues, not least @akankshi.bsky.social! 🤩

03.03.2026 11:00 👍 16 🔁 2 💬 0 📌 0
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Can contractile forces that internalize cells and rearrange tissues cause harm? They can, if not mitigated. We show that built-in high stretchability of the extraembryonic cells protects gastrulating Drosophila embryo from being ripped apart. (1/9) doi.org/10.64898/202...

03.03.2026 03:03 👍 19 🔁 6 💬 1 📌 0
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Efficient genome editing using CRISPR–Cas9 in reef-building corals - Nature Protocols In this protocol, the authors present straightforward and efficient methods to genetically modify corals and study gene function throughout various life-history stages using CRISPR–Cas9-based mutagene...

To increase the use of gene editing in corals, we have made a comprehensive methods paper describing the protocol. We hope this helps the field of functional genetics in corals. www.nature.com/articles/s41...

02.03.2026 17:54 👍 45 🔁 17 💬 2 📌 0
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Excited to share our new paper (CVPR 2026 🚀): "MuViT: Multi-Resolution Vision Transformers for Learning Across Scales in Microscopy" which enables local predictions to use global context.
Great work led by @albertdm.bsky.social & another fun collab w @gioelelamanno.bsky.social! @scadsai.bsky.social

02.03.2026 13:42 👍 64 🔁 28 💬 1 📌 2
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Yep, it lags a little. But still quite impressive considering that each "pixel" is a 150 MPixel multires image. Overall the total number of 'adressable' pixels in this 2D image are 225x225x150 Mpix = 7.6 Tera pixels. #ImageJ #Fiji #BigDataViewer

17.10.2024 08:36 👍 19 🔁 10 💬 2 📌 0
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After 5 years of developing, a new preprint from the lab - introducing our workflow for comparative insect connectomics, aimed at democratizing connectomics. @erc.europa.eu @lundvision.bsky.social @biologylu.bsky.social Read it here: www.biorxiv.org/content/10.6...

01.03.2026 20:58 👍 82 🔁 40 💬 2 📌 1