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Xinkai Du

@xinkaidu

PhD in PsychMethods & ClinicalPsych with @sverreuj @SachaEpskamp | Prev @UvAmsterdam @UWaterloo | (Network) Psychometrics; (Intensive) Longitudinal Data; Natural Language Processing; Applied Statistics

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10.10.2023
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Latest posts by Xinkai Du @xinkaidu

APA PsycNet

The link to the initial study on fit indices and Hu/Bentler cutoffs mentioned earlier: psycnet.apa.org/record/2026-31171-001

19.01.2026 21:26 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

In simulations with both synthetic and empirical networks, DFI showed transparent and often superior type I & II error rates vs. Hu/Bentler cutoffs (especially in empirical networks). We argue that the transparency and consistency of DFI provide more reliable model evaluation of network models.

19.01.2026 21:05 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Our recent study on PsychMethod showed that SEM fit indices had desirable sensitivity to the misspecification in (dynamic) networks, yet were also sensitive to sample and model characteristics (e.g., N and network size), so we created DFI for networks to accommodate design-specific characteristics.

19.01.2026 21:05 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
OSF

My latest work with @sachaepskamp.bsky.social on creating dynamic fit index cutoffs for Gaussian graphical models is now out as a preprint:
osf.io/preprints/ps..., accompanied by an R package, netDFI: github.com/xinkaidupsy/....

19.01.2026 21:05 πŸ‘ 3 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

In simulations with both synthetic and empirical networks, DFI showed transparent and often superior type I & II error rates compared to conventional cutoffs (especially in empirical networks).

19.01.2026 20:58 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Our latest work on PsychMethod showed that SEM fit indices had desirable sensitivity to the misspecification in (dynamic) networks, yet were also sensitive to sample and model characteristics (e.g., N and network size), so we created DFI for networks to accommodate design-specific characteristics.

19.01.2026 20:58 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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Day 1 at Stanford and officially started my 4-month US visit in this special time. Amazed by the beautiful campus.

06.10.2025 17:04 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Sign the Petition Adopt Registered Reports at Psychological Methods

Adopt Registered Reports at Psychological Methods - Sign the Petition! chng.it/8h2KXXR4jk

23.08.2025 18:39 πŸ‘ 4 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
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Currently visiting Dr. Johnny Zhang in Notre Dame and excited to learn about his approaches combining CS and psychometrics.

Had a wonderful encounter with a deer on the way to campus. :)

12.07.2025 13:41 πŸ‘ 4 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
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Discovering cognitive strategies with tiny recurrent neural networks - Nature Modelling biological decision-making with tiny recurrent neural networks enables more accurate predictions of animal choices than classical cognitive models and offers insights into the underlying cog...

Thrilled to see our TinyRNN paper in @nature! We show how tiny RNNs predict choices of individual subjects accurately while staying fully interpretable. This approach can transform how we model cognitive processes in both healthy and disordered decisions. doi.org/10.1038/s415...

02.07.2025 19:03 πŸ‘ 329 πŸ” 141 πŸ’¬ 9 πŸ“Œ 4

@apajournals.bsky.social

26.06.2025 08:11 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
APA PsycNet

Happy to share that our article, led by @xinkaidu.bsky.social, on confirmatory network modeling has been published in Psychological Methods!

psycnet.apa.org/record/2026-...

26.06.2025 05:04 πŸ‘ 27 πŸ” 8 πŸ’¬ 1 πŸ“Œ 1

Thrilled to share that this paper has now been published on Psychological Methods. See 🧡 below for an intro & shinyapp to view the results, as well as non-paywalled version. dx.doi.org/10.1037/met0...

26.06.2025 08:00 πŸ‘ 18 πŸ” 7 πŸ’¬ 1 πŸ“Œ 1
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Some papers are really good because they make just one point, but they make it really clearly β€” such as β€œStatistical Control Requires Causal Justification”

journals.sagepub.com/doi/10.1177/...

02.06.2025 17:24 πŸ‘ 107 πŸ” 25 πŸ’¬ 7 πŸ“Œ 2

The method works both for panel and n=1 data. By enabling researchers to statistically compare networks across groups/individuals, we hope the method opens new avenues for testing genetic influences, developmental theories, treatment mechanisms, and cross-cultural differences.

26.05.2025 12:17 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

I planned to present this method at #SAA2025. Unfortunately I could not make it due to an unforeseen cold. Hope you enjoy the discussion and stay safe and healthy!

26.05.2025 11:07 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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The paper also comes with a brief tutorial on the usage of the package

26.05.2025 11:07 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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GitHub - xinkaidupsy/IVPP Contribute to xinkaidupsy/IVPP development by creating an account on GitHub.

We have implemented IVPP in an R package under the same name: github.com/xinkaidupsy/...

26.05.2025 11:07 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Second, the method allows the comparison of networks when only a few data points (t = 3 or more) are available per person, a situation that is very common in large-scale longitudinal surveys.

26.05.2025 11:07 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

In contrast, IVPP uncovers edge-level differences through a novel algorithm we present, termed partial pruning, directly constructing the distinct networks of each group/individual. We believe it provides a more meaningful network difference test that reveals the mechanisms underlying heterogeneity.

26.05.2025 11:07 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

IVPP fills in two essential gaps in the literature: First, previous approaches to comparing dynamical networks unfortunately only report the presence/absence of heterogeneity, and are only viable when intensive measurements are available.

26.05.2025 11:07 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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The three-month research visit with @sachaepskamp.bsky.social at NUS was a great memory, and even more excited with research output.

Excited to share a novel approach to compare networks models in time-series and panel data, which we term invariance partial pruning (IVPP).
osf.io/vb8dz_v1

26.05.2025 11:07 πŸ‘ 10 πŸ” 1 πŸ’¬ 2 πŸ“Œ 0
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πŸ₯³thrilled that our dockerHDDM tutorial paper, after many years's work was published in my dream journal AMPPS of @psychscience.bsky.social 🀩
πŸ‘‡
doi.org/10.1177/2515....

The image's been downloaded 10K+⏬ docker Hub

Such a pleasure to work w/ Wanke, Ru Yuan, Haiyang & member of HDDM/HSSM team!

14.02.2025 08:41 πŸ‘ 16 πŸ” 8 πŸ’¬ 1 πŸ“Œ 1
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1/3

Tutorial on exploring ecological momentary assessment data is online at AMPPS, with:
- Accessible ways to visualize data for better understanding
- Models to get some first insights
- Further reading boxes for more advanced topics
- Reproducible pipeline you can run over your own data

13.02.2025 12:04 πŸ‘ 155 πŸ” 77 πŸ’¬ 6 πŸ“Œ 7

Check out this important methodological validation study of SEM fit indices for (confirmatory) network modeling. Led by @xinkaidu.bsky.social!

07.02.2025 07:22 πŸ‘ 6 πŸ” 2 πŸ’¬ 0 πŸ“Œ 0

Thank the collaborators for the continuous support and contribution! @noraskjerdingstad.bsky.social @renefreichel.bsky.social @omidvebrahimi.bsky.social Ria Hoekstra @sachaepskamp.bsky.social

07.02.2025 06:46 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

The Shiny app allows users to view the results interactively, as well as checking the rejection rates of different cutoff values they choose by themselves

07.02.2025 06:46 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

2. Fit indices were sensitive to mis-defined confirmatory network structures and non-stationarity.
3. Conventional cutoffs were convenient assessment criteria and generally performed well, albeit stricter cutoffs might be needed for hypothesis testing and replication studies

07.02.2025 06:46 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

1. Although most network studies are exploratory so far, confirmatory network analysis has been entirely feasible. It is also often neglected that in longitudinal settings, exploratory network models are in-fact semi-confirmatory for the stationarity assumption they rely on.

07.02.2025 06:46 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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(PDF) Moving from exploratory to confirmatory network analysis: An evaluation of SEM fit indices and cutoff values in network psychometrics PDF | Network models are well-suited for phenomena detection, and most empirical network studies have been exploratory so far. Yet, due to the close... | Find, read and cite all the research you need ...

Preprint on using SEM fit indices & conventional cutoffs in confirmatory network analysis updated! Now with a Shiny app for results display.

PsyArXiv: osf.io/preprints/ps...
RG: www.researchgate.net/publication/...
Shiny app: github.com/xinkaidupsy/...

See 🧡 for the summary of results

07.02.2025 06:24 πŸ‘ 14 πŸ” 5 πŸ’¬ 1 πŸ“Œ 2