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AI-driven Optical Biology Lab

@aiopticalbiolab

Research group lead by @henriqueslab.bsky.social‬ at @itqbnova.bsky.social Combining #AI with #superresolutionimaging to push the boundaries of optical cell biology #SMLM #SRRF

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14.11.2024
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Latest posts by AI-driven Optical Biology Lab @aiopticalbiolab

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Last 3 days to register for 𝐈𝐌𝐒𝟐𝟎𝟐𝟔 symposium organized by
@itqbnova.bsky.social.
DON´T miss these amazing researchers on 19/03: @seamusholden.bsky.social, @guijacquemet.bsky.social, @silvapereiralab.bsky.social, @pinholab.bsky.social, @henriqueslab.bsky.social.

🔗: ims2026.itqbnovacommunity.org

23.02.2026 15:28 👍 1 🔁 2 💬 0 📌 1
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Congrats to the newest PhD graduate at our lab, supervised by
@henriqueslab.bsky.social, now Dr. @afonsomendes92.bsky.social!👨🏼‍🎓👏

His research work culminated in the publication of #SReD in
Nature Communications. Read here: tinyurl.com/NatureSRed

@gimmfoundation.bsky.social
@itqbnova.bsky.social

08.01.2026 11:21 👍 5 🔁 1 💬 0 📌 0
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𝗗𝗼 𝘆𝗼𝘂 𝘄𝗮𝗻𝘁 𝘁𝗼 𝗹𝗲𝗮𝗿𝗻 𝗻𝗲𝘄 𝘁𝗲𝗰𝗵𝗻𝗶𝗾𝘂𝗲𝘀?🤔

🧫Expansion Microscopy🦾3D Printing🔬Microscopy Demos🖼️AI Image Analysis🦠Sample Enhancement

Join us at @itqbnova.bsky.social for 2 days of live demos, workshops and expert talks in 𝗖𝗲𝗹𝗹 𝗕𝗶𝗼𝗹𝗼𝗴𝘆, 𝗠𝗶𝗰𝗿𝗼𝗯𝗶𝗼𝗹𝗼𝗴𝘆 or 𝗢𝗿𝗴𝗮𝗻-𝗼𝗻-𝗮-𝗖𝗵𝗶𝗽.

Register now: shorturl.at/tPTEQ

16.12.2025 11:42 👍 4 🔁 0 💬 0 📌 0

Do you know how far phototoxicity can hinder your experiments?🤔 @mariodelr.bsky.social and @gomez-mariscal.bsky.social have just published their work on #PhotoFiTT in @natcomms.nature.com where they explain how to quantitatively measure it in live-cell imaging.⚡🧫🔬

Read more at: shorturl.at/ly9Zn

15.12.2025 15:38 👍 9 🔁 6 💬 0 📌 0
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Raquel Portela e Mario del Rosario, ITQB NOVA: “Transformar o microscópio num sensor inteligente” Em entrevista exclusiva ao Healthnews, os investigadores Raquel Portela e Mario del Rosario do ITQB NOVA apresentam o InfectoFiTT, uma ferramenta de IA que monitoriza em tempo real o impacto das infeç...

Our Researcher @mariodelr.bsky.social and Raquel Portela from @microbematos.bsky.social were invited by @healthnewspt.bsky.social to talk about their new collaboration project awarded by Early Career Research Award, 𝗜𝗻𝗳𝗲𝗰𝘁𝗼𝗙𝗶𝗧𝗧.

Read the full interview at: tinyurl.com/infectofitt

09.12.2025 16:37 👍 6 🔁 3 💬 0 📌 0

Great news for @aiopticalbiolab.bsky.social! @henriqueslab.bsky.social has been awarded #HealthResearch grant from @caixaresearch.bsky.social.🎉

This milestone strengthens the pursue of our scientific objectives and represents an important step forward for the future of our lab.🔬 #laCaixaFoundation

20.11.2025 12:13 👍 18 🔁 4 💬 1 📌 0

Congrats to @henriqueslab.bsky.social for the @caixaresearch.bsky.social Health grant! 👏

The project will use AI to create smart microscopes that automatically adjust their lighting in real time, letting us watch the viral infection process over days.

🔗Know more: shorturl.at/yi9Rz

20.11.2025 11:31 👍 8 🔁 4 💬 0 📌 0

Just in time for the presentation of his PhD work at the 𝗜𝗧𝗤𝗕 𝗡𝗢𝗩𝗔 𝗣𝗵𝗗 𝗠𝗲𝗲𝘁𝗶𝗻𝗴, our researcher António Brito’s paper on #mAIcrobe🦠 has just been released.

Project developed by the research groups of
@pinholab.bsky.social and @henriqueslab.bsky.social

👇Learn more about it in the post below.👇

29.10.2025 11:47 👍 1 🔁 1 💬 0 📌 0

🚀🔬 Announcing #IMS2026 at @itqbnova.bsky.social! We're assembling a #LifeSciences #Microscopy symposium packed with ✨ speakers and 🧑‍🔬 workshops. All about imaging cells with photons, electrons and AI! If you love microscopy, you need to be here. Join us on March 19!
ims2026.itqbnovacommunity.org

21.10.2025 14:25 👍 22 🔁 16 💬 1 📌 1

🤝🏼 This event is made possible thanks to the support of Izasa Scientific by Palex and collaboration with Bacterial Imaging Cluster (BIC) and MostMicro at @itqbnova.bsky.social

21.10.2025 10:58 👍 2 🔁 0 💬 0 📌 0
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𝗪𝗵𝗮𝘁 𝗶𝗳 𝘁𝗵𝗲 𝘁𝗲𝗰𝗵𝗻𝗶𝗾𝘂𝗲 𝘁𝗵𝗮𝘁 𝗰𝗼𝘂𝗹𝗱 𝘁𝗿𝗮𝗻𝘀𝗳𝗼𝗿𝗺 𝘆𝗼𝘂𝗿 𝗿𝗲𝘀𝗲𝗮𝗿𝗰𝗵 𝗶𝘀 𝗮𝗹𝗿𝗲𝗮𝗱𝘆 𝘄𝗶𝘁𝗵𝗶𝗻 𝘆𝗼𝘂𝗿 𝗿𝗲𝗮𝗰𝗵?🤔

Discover imaging techniques that will unlock new directions in your work. Join us for two immersive days of live demonstrations,expert talks and hands-on workshops.🔬

📝Register at: ims2026.itqbnovacommunity.org

21.10.2025 10:57 👍 4 🔁 0 💬 1 📌 1
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The 𝗘𝘂𝗿𝗼𝗽𝗲𝗮𝗻 𝗥𝗲𝘀𝗲𝗮𝗿𝗰𝗵𝗲𝗿𝘀’ 𝗡𝗶𝗴𝗵𝘁 𝗢𝗲𝗶𝗿𝗮𝘀 𝟮𝟬𝟮𝟱 was the last outreach event at our lab with @mariodelr.bsky.social, @gomez-mariscal.bsky.social, Daria Aristova and Damián Martínez.👩‍🔬👩‍💻
Having scientists from diverse fields showcasing the range of work being developed in our institute was truly inspiring🤩

13.10.2025 13:13 👍 4 🔁 1 💬 0 📌 0
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Last week, @mariodelr.bsky.social & Raquel Portela (@microbematos.bsky.social IMIB group) presented their ECRA-award collaboration project, 𝗜𝗻𝗳𝗲𝗰𝘁𝗼𝗙𝗶𝗧𝗧 at the 𝗜𝗻𝘁𝗲𝗿𝗻𝗮𝘁𝗶𝗼𝗻𝗮𝗹 𝗠𝗶𝗰𝗿𝗼𝗼𝗿𝗴𝗮𝗻𝗶𝘀𝗺 𝗗𝗮𝘆.
The event happened in Oeiras at Santo Amaro Beach and was organized by @itqbnova.bsky.social & #CMOeiras

25.09.2025 14:31 👍 4 🔁 0 💬 1 📌 0
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What if artificial intelligence could tell how bacteria infect our cells?

Raquel Portela and Mario Del Rosario, winners of the ECRA Prize's 6th edition, are developing a tool to observe in real time the harmful effects of bacteria like Staphylococcus aureus in our cells. 🔬🦠

🔗 shorturl.at/sIIMK

20.08.2025 10:18 👍 4 🔁 1 💬 1 📌 0
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👏Congratulations to researchers @mariodelr.bsky.social and Daria Aristova for their post-graduation in the StartUp Research Program developed by @itqbnova.bsky.social and NOVA SBE.

They had to develop a startup project and present it to a panel of experts and venture capital representatives.🎯

06.08.2025 12:48 👍 2 🔁 0 💬 0 📌 0
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🏖️ July at @itqbnova.bsky.social means Summer Science-summer's internship programme for undergraduates. Our lab welcomed one motivated student supervised by @mariodelr.bsky.social.

👩‍🔬Students got to experience 27h of hands-on lab work and a sailing baptism!⛵ Read about it at:https://shorturl.at/n55Qj

05.08.2025 10:27 👍 1 🔁 0 💬 0 📌 0
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🚨Join us! We're soon opening 3 postdoctoral positions in #AIDrivenBiology. Seeking biologists (especially microbiology and infection biology), computer scientists, and microscopy developers. Ideal candidates are those eager to use or develop next-gen tech for cell biology. Get in touch (DM/email)

10.07.2025 08:34 👍 50 🔁 31 💬 1 📌 0
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Last Friday, 4th of July, we celebrated
#ITQBNOVADay! 🎉

Our community gathered to award prizes, pay tribute to
staff members and look back on some of the most
memorable moments of the past year.🏅👏

The day ended with our traditional "arraial" and lots of
fun! 🎶

11.07.2025 13:23 👍 5 🔁 1 💬 0 📌 0
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Last Friday we celebrated @itqbnova.bsky.social Day!🎂🥂
In the ceremony,𝗘𝗖𝗥𝗔 𝗽𝗿𝗶𝘇𝗲 was awarded to researchers @mariodelr.bsky.social & Raquel Portela (from @microbematos.bsky.social IMIB group) in recognition of their outstanding proposal: InfectoFITT.🏅
Award sponsored by #OeirasValley and #Sarstedt

07.07.2025 14:34 👍 10 🔁 3 💬 3 📌 0

🧾New paper now on ‪‪‪‪Nature Protocols ‬🎉The #ExSRRF protocol gives you all details on how to merge Expansion Microscopy technique with #eSSRF analysis. Developed by Dominik Kylies, @puellesv.bsky.social and @hannah-superres.bsky.social, @henriqueslab.bsky.social

🔗: www.nature.com/articles/s41...

03.07.2025 09:47 👍 9 🔁 5 💬 0 📌 0

It's here! ✨
The #ExSRRF protocol paper is out 😍. Full details for merging Expansion Microscopy with our eSRRF analysis. From cells to tissue. A partnership with @puellesv.bsky.social's lab. Lead by Dominik Kylies and @hannah-superres.bsky.social + colleagues. #ExM #eSRRF
➡️ Open link: rdcu.be/euvEw

03.07.2025 08:44 👍 43 🔁 15 💬 0 📌 2

Our researcher @afonsomendes92.bsky.social & collaborator @christlet.bsky.social just published on @natcomms.nature.com.🙌 They developed a new analysis tool that automatically finds repeating patterns in structures in biological images without prior knowledge.
Read it at: nature.com/articles/s41...

02.07.2025 13:30 👍 9 🔁 3 💬 0 📌 0

New pre-print alert 🚨 @henriqueslab.bsky.social and @guijacquemet.bsky.social just published a pre-print on framework to auto generate pre-prints from simple text. Interested to use it for your research?

📃Read more about it at: zenodo.org/records/1575...

27.06.2025 13:52 👍 6 🔁 1 💬 0 📌 0
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In the past week we welcomed students from Escola Amélia Rey Colaço at @itqbnova.bsky.social.
Researchers @mariodelr.bsky.social & Daria demonstrated the principle expansion microscopy was originated from- 𝗕𝗮𝗯𝘆 𝗗𝗶𝗮𝗽𝗲𝗿𝘀👶 We have our lab doors open to young minds to show them how research can be fun!👩‍🔬

17.06.2025 16:54 👍 3 🔁 0 💬 0 📌 0
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#OeirasValleyScienceFestival was a blast!
With 22.000 participants, the energy was incredible.
@henriqueslab.bsky.social delivered an amazing talk and researchers Daria and @mariodelr.bsky.social were busy all day sharing the wonders of microscopy🔬with diapers🍼- Curious to know how they relate?🤔💭

28.05.2025 13:55 👍 3 🔁 1 💬 0 📌 0
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Do not miss 𝗢𝗲𝗶𝗿𝗮𝘀 𝗩𝗮𝗹𝗹𝗲𝘆 𝗦𝗰𝗶𝗲𝗻𝗰𝗲 𝗙𝗲𝘀𝘁𝗶𝘃𝗮𝗹:

📅On the 25th of May at 10:50 @henriqueslab.bsky.social will talk in a roundtable session about 𝗔I 𝗶𝗻 𝗛𝗲𝗮𝗹𝘁𝗵.
👩‍🔬Meanwhile researchers Daria Aristova & @mariodelr.bsky.social will be representing our lab at @itqbnova.bsky.social stand. 🫵COME SEE US!

19.05.2025 16:30 👍 9 🔁 1 💬 0 📌 0
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Over this break, @mariodelr.bsky.social & Mariana Ferreira engaged in an outreach activity under the scope of Oeiras mun. project "Universidade de Primavera".
Students became scientists for a day, observed their own cells and explored the new technology for bioplastics at @itqbnova.bsky.social. 🧫🔬

23.04.2025 16:58 👍 5 🔁 1 💬 0 📌 0
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Following the release of @gomez-mariscal.bsky.social and Mariana Ferreira #ReScale4DL work, Estibaliz shared her view on "FAIR and high-quality AI-ready data for bioimage analysis" on the 4-part @ai4life.bsky.social webinar series in collab with #GloBIAS 📅 Don´t miss the next one at: t.co/9TdywIGrgy

10.04.2025 17:50 👍 13 🔁 6 💬 0 📌 0

🎉Congratulations to our researchers Mariana Ferreira and
@gomez-mariscal.bsky.social for their #ReScale4DL work available on pre-print at @biorxivpreprint.bsky.social🧐 Find out how down-sampling data can improve your high-resolution imaging at biorxiv.org/content/10.1...

#BioImageAnalysis #DL #AI

10.04.2025 17:47 👍 13 🔁 4 💬 1 📌 0
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Our group leader @henriqueslab.bsky.social was the most recent guest of "90 segundos de ciência", a podcast broadcasted in the national radio by #RTP, #Antena1.

Click in the link below to find out how our lab uses #ArtificialIntelligence to improve cell imaging using microscopy! 🦠🔬
buff.ly/ZaHToof

28.03.2025 15:41 👍 9 🔁 1 💬 0 📌 0