Ethan Gyllenhaal's Avatar

Ethan Gyllenhaal

@ethanofthegulls

NSF Postdoc at Texas Tech and Cornell studying the evolution of south Pacific birds with genomics, museums, and simulations. Birder. SLiM enjoyer. He/him.

166
Followers
165
Following
32
Posts
26.09.2023
Joined
Posts Following

Latest posts by Ethan Gyllenhaal @ethanofthegulls

Preview
UMN: Don't Close Boynton Dental Clinic! On March 5th, the University of Minnesota announced plans to permanently close the Boynton Health Dental Clinic, which has served the university community for nearly 106 years. This closure will hav...

#UMN has closed their dental clinic with no warning or explanation, and in flagrant violation of their contract with UMN grad workers - this is the only dental care covered by our health plan!
If associated w/ UMN, please sign/share the petition to stop this: actionnetwork.org/petitions/um...

10.03.2026 16:08 πŸ‘ 3 πŸ” 5 πŸ’¬ 1 πŸ“Œ 0
Picture of DOGE guy Nate Cavanaugh

Picture of DOGE guy Nate Cavanaugh

Screenshot of my DOGE letter β€œDr. Joseph Rezek
Dear NEH Grantee,
This letter provides notice that the National Endowment for the Humanities (NEH) is terminating your federal grant (Grant Application No. FEL29509824) effective April 3, 2025, in accordance with the termination clause in your Grant Agreement.
Your grant no longer effectuates the agency's needs and priorities and conditions of the Grant
Agreement and is subject to termination due to several reasonable causes, as outlined in 2CFRΒ§200.340.
For instance, NEH has reasonable cause to terminate your grant in light of the fact that the NEH is repurposing its funding allocations in a new direction in furtherance of the President's agenda. The President's February 19, 2025 executive order mandates that the NEH eliminate all non-statutorily required activities and functions. See Commencing the Reduction of the Federal Bureaucracy, E.O. 14217 (Feb. 19, 2025). Your grant's immediate termination is necessary to safeguard the interests of the federal government, including its fiscal priorities. Any objections or appeals to this termination will be managed in strict accordance with the President's Executive Orders,

Screenshot of my DOGE letter β€œDr. Joseph Rezek Dear NEH Grantee, This letter provides notice that the National Endowment for the Humanities (NEH) is terminating your federal grant (Grant Application No. FEL29509824) effective April 3, 2025, in accordance with the termination clause in your Grant Agreement. Your grant no longer effectuates the agency's needs and priorities and conditions of the Grant Agreement and is subject to termination due to several reasonable causes, as outlined in 2CFRΒ§200.340. For instance, NEH has reasonable cause to terminate your grant in light of the fact that the NEH is repurposing its funding allocations in a new direction in furtherance of the President's agenda. The President's February 19, 2025 executive order mandates that the NEH eliminate all non-statutorily required activities and functions. See Commencing the Reduction of the Federal Bureaucracy, E.O. 14217 (Feb. 19, 2025). Your grant's immediate termination is necessary to safeguard the interests of the federal government, including its fiscal priorities. Any objections or appeals to this termination will be managed in strict accordance with the President's Executive Orders,

Last year, this guy (left) from DOGE used ChatGPT to find NEH grants that were too β€œDEI” for Trump, and canceled them, including mine, as shown by the letter I received last April (right). Huge new NYT article on the back story link below

07.03.2026 20:32 πŸ‘ 2933 πŸ” 1121 πŸ’¬ 78 πŸ“Œ 77
Post image

Want a reliable way to tell the two cryptic giant hummingbird species apart while birding in the Andes? Use your ear! 🎢 In a new @fieldornith.bsky.social J. Field Ornithology paper, we show how their vocalizations differ clearlyβ€”making sound a slam dunk for identifying them in the field.

06.03.2026 19:50 πŸ‘ 56 πŸ” 15 πŸ’¬ 3 πŸ“Œ 0
Preview
Genomic erosion in the assessment of species' extinction risk and recovery potential Abstract. Many species are undergoing rapid population declines and environmental deterioration, leading to genomic erosion. Here we define genomic erosion

Genomic erosion in the assessment of species' extinction risk and recovery potential
academic.oup.com/jhered/advan...

02.03.2026 14:18 πŸ‘ 7 πŸ” 5 πŸ’¬ 0 πŸ“Œ 0
logo for SPrOUT: Species Prediction of Unknown Taxa - a line drawing of a plant with two green leaves emerging from a flask containing multiple DNA helices. Logo designed by Lisa Limeri, with images from the Noun Project flask from Noun Project user Humam flower from Noun Project user Vanicon studio DNA from Noun Project user Akhmad Zaini

logo for SPrOUT: Species Prediction of Unknown Taxa - a line drawing of a plant with two green leaves emerging from a flask containing multiple DNA helices. Logo designed by Lisa Limeri, with images from the Noun Project flask from Noun Project user Humam flower from Noun Project user Vanicon studio DNA from Noun Project user Akhmad Zaini

Figure from the linked preprint, showing the relationship between the number of Angiosperms353 reference genes and Accuracy of detecting plant families in mixed reads. Based on several z-score values, SPrOUT is generally at 98% accuracy with fewer than 100 genes.

Figure from the linked preprint, showing the relationship between the number of Angiosperms353 reference genes and Accuracy of detecting plant families in mixed reads. Based on several z-score values, SPrOUT is generally at 98% accuracy with fewer than 100 genes.

New from our lab! Introducing SPrOUT: Species Prediction of Unknown Taxa.

We developed and tested a novel method to ID plants in mixed DNA with Angiosperms353 using cumulative phylogenetic distances. >98% accuracy to family level for in silico and real test data.

www.biorxiv.org/content/10.6...

23.02.2026 16:23 πŸ‘ 2 πŸ” 3 πŸ’¬ 1 πŸ“Œ 0
Preview
University of Texas regents OK limits on controversial subjects Opponents warned the policy’s vagueness could push professors to self-censor and leave students less prepared for the workplace.

The University of Texas System’s Board of Regents unanimously approved a rule requiring its universities to ensure students can graduate without studying β€œunnecessary controversial subjects,” despite warnings it could leave them less prepared for the real world.

19.02.2026 19:33 πŸ‘ 663 πŸ” 305 πŸ’¬ 126 πŸ“Œ 270
Preview
Postzygotic isolation drives genomic speciation between highly cryptic Hypocnemis antbirds from Amazonia Abstract. How species evolve reproductive isolation in the species-rich Amazon basin is poorly understood in vertebrates. Here, we sequenced a reference ge

Also, not sure how field diagnosable the songs are (sonograms are definitely different), but I love this paper for importance of postzygotic isolation in true resistance to introgression: academic.oup.com/evolut/artic...

16.02.2026 22:26 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Depends on how assortative you're thinking! Plenty where there is still notable hybridization (e.g. great plains contact zone taxa, arguably Vermivora). Plus true measures of assortative mating are hard and rare, further challenged by confounded plumage/behavior.

16.02.2026 22:15 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Hot take: folks are too focused on the AI emphasis of the PRFB & missing the most concerning part of the solicitation.

The heavy emphasis on bio-AI integration for β€œtechnological advances” is a concerning degradation of NSFs mission to fund basic biological research.

06.02.2026 00:59 πŸ‘ 41 πŸ” 13 πŸ’¬ 1 πŸ“Œ 1
Preview
Texas Tech struggles with new policy on gender, race The system’s chancellor meant to instill clarity and accountability, but three weeks into the spring semester, some instructors say the standards have led to β€œcensorship.”

www.texastribune.org/2026/02/04/t...

04.02.2026 13:42 πŸ‘ 2 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

Police departments in targeted deep-blue cities keep on saying they’ll try to stop ICE from breaking the law and then they do jack shit except occasionally arrest some protesters.

Its notable they’re even saying these things, but lets focus on what their actions have always and continue to tell us.

01.02.2026 03:53 πŸ‘ 418 πŸ” 96 πŸ’¬ 6 πŸ“Œ 2
Preview
Job Opportunities | .

The Wyoming Game & Fish Dept. is hiring two Black Rosy-Finch technicians to conduct alpine surveys in Wyoming's high elevation mountains during June 1st to Aug 31st 2026: www.governmentjobs.com/careers/wyom.... Spread the word!

16.01.2026 04:38 πŸ‘ 13 πŸ” 16 πŸ’¬ 0 πŸ“Œ 0
Post image

The AOS is pleased to congratulate lead author Bryce W. Robinson as the winner of the 2025 AOS Wesley Lanyon Award for the best integrative science paper published in one of our journals over the past two years by an early-career ornithologist. americanornithology.org/aos-announce...
#AOSawards

14.01.2026 18:04 πŸ‘ 11 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
Elucidating the invasion history of introduced bullfrogs in New Mexico using population genetic approaches The American Bullfrog, Rana (Aquarana) catesbeiana, is an extremely successful invader that has spread globally in the last century, impacting vulnerable ecosystems. In the western U.S., bullfrogs wer...

So proud of Master's student, Celina Eberle, who #published her undergrad #research in @peerj.bsky.social, which dives into the #invasion #history of American Bullfrogs into #NewMexico waterways!
peerj.com/articles/204...

Moral of the story: let's be more careful about stocking 🐸 #UNM #UNMBiology

10.01.2026 07:11 πŸ‘ 5 πŸ” 1 πŸ’¬ 0 πŸ“Œ 1
Me at my poster

Me at my poster

Noisy pitta stickers

Noisy pitta stickers

If you happen to be at #TIBS2026 and really like mangroves and macroecology, come swing by my poster (1024) to hear about my work modelling the Pleistocene range of mangroves and the drivers of faunal specialisation in this habitat. I also have a limited no. of Pitta stickers to give away! #TIBS26

08.01.2026 12:55 πŸ‘ 18 πŸ” 3 πŸ’¬ 1 πŸ“Œ 0
Preview
Postdoctoral Researcher All Job Postings will close at 12:01a.m. CST (1:01a.m. EST) on the specified Closing Date (if designated). If you close the browser or exit your application prior to submitting, the application progre...

LSU Museum of Natural Sciences is hiring a postdoc! Come join our very active and supportive museum community. Applicants can work with any of the major divisions: πŸ€πŸ¦œπŸ¦ŽπŸΈπŸ 

Review begins February 15th, please share!

lsu.wd1.myworkdayjobs.com/LSU/job/0119...

07.01.2026 15:19 πŸ‘ 22 πŸ” 25 πŸ’¬ 0 πŸ“Œ 3
MBE | SLiM 5: Eco-evolutionary Simulations Across Multiple Chromosomes and Full Genomes

MBE | SLiM 5: Eco-evolutionary Simulations Across Multiple Chromosomes and Full Genomes

Haller, Ralph & Messer present SLiM 5, a major extension of the SLiM simulation framework for simulating multiple chromosomes, enabling a heightened level of realism for full-genome simulations.

πŸ”— doi.org/10.1093/molbev/msaf313

#evobio #molbio #compbio

05.01.2026 08:55 πŸ‘ 36 πŸ” 27 πŸ’¬ 0 πŸ“Œ 0
Post image Post image

It’s official: I’m joining the School of Earth, Environment, and Sustainability at the University of Iowa as an assistant prof starting Fall 2026!

I’ll be recruiting multiple grad students and postdocs to join my lab, so if you’re into disturbance ecology and conservation science… watch this space!

03.01.2026 15:36 πŸ‘ 205 πŸ” 21 πŸ’¬ 36 πŸ“Œ 1
Preview
A colorful legacy of hybridization in wood-warblers includes frequent sharing of carotenoid genes among species and genera Introgression between species can shape evolutionary trajectories in important ways. This study of the entire family of the colorful wood-warblers (Parulidae) uses whole-genome sequencing to reveal fr...

New paper out. If you like colorful birds, hybridization, and phylogenetics, read on! 🧡https://doi.org/10.1371/journal.pbio.3003501

12.12.2025 15:53 πŸ‘ 98 πŸ” 44 πŸ’¬ 1 πŸ“Œ 6
Post image

Check out our cover article by @timjanicke.bsky.social and colleagues about the role of sexual selection in animal speciation. academic.oup.com/evlett/artic.... The beautiful illustration is by Katharina BΓ³th.

04.12.2025 16:04 πŸ‘ 285 πŸ” 88 πŸ’¬ 7 πŸ“Œ 13
Preview
A genetic test of the theory of island biogeography using the Fiji bush-warbler Do patterns of gene flow follow the predictions of this classic theory?

Your daily Avian Hybrids story!

A genetic test of the theory of island biogeography using the Fiji bush-warbler
avianhybrids.wordpress.com/2021/06/30/a...

#ornithology

04.12.2025 14:04 πŸ‘ 7 πŸ” 2 πŸ’¬ 0 πŸ“Œ 0
Preview
Employment - Ecology & Evolutionary Biology

EEB Postdoctoral Fellowship @ U.Toronto app deadline Jan 15 2026. Opportunity for independent research, encourages collab across labs/disciplines. Lots of great folks to interact with, Come join us!
eeb.utoronto.ca/employment-2/

02.12.2025 21:09 πŸ‘ 25 πŸ” 41 πŸ’¬ 1 πŸ“Œ 0
Post image

I have a new preprint demonstrating a genome-architecture-aware approach to inferring species trees and introgression landscapes from a small number of genomes. If you are interested in phylogenomics, birds, or hybridization, this is for you! www.biorxiv.org/content/10.1...

01.12.2025 19:35 πŸ‘ 82 πŸ” 41 πŸ’¬ 1 πŸ“Œ 1

Check out our short warbler hybrid paper out today, including a new unofficial common name. Carotenoid people will find some little tidbits of discussion about how these hybrids can help us understand regulation of yellow feathers.

21.11.2025 18:34 πŸ‘ 13 πŸ” 4 πŸ’¬ 0 πŸ“Œ 0

I'm not familiar with the precise tree, but there is enough variation in mask extent and crown color that one has to wonder about ILS/ancient gene flow! Wonder what ASIP's doing....

21.11.2025 18:39 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
A figure showing the "core" and "periphery" of lowland forest in South America, a figure showing the genetic structure of our population genetic simulations, and a figure of three alternate divergence histories simulated.

A figure showing the "core" and "periphery" of lowland forest in South America, a figure showing the genetic structure of our population genetic simulations, and a figure of three alternate divergence histories simulated.

Look forward to more about Solomon Island phylogeography in the future, but in the mean time, @lukemusher.bsky.social and I have a pre-print that highlights how a similar phenomenon can occur on continents (with bias in both topology and branch lengths): doi.org/10.1101/2025...

21.11.2025 18:29 πŸ‘ 10 πŸ” 2 πŸ’¬ 1 πŸ“Œ 0
A map of the New Georgia Group, a photo highlighting a phenotypic intermediate, and a plot highlighting its 50/50 intermediate ancestry.

A map of the New Georgia Group, a photo highlighting a phenotypic intermediate, and a plot highlighting its 50/50 intermediate ancestry.

One big question that still lingers is when this gene flow occurs. Theory suggests that dispersal start high and declines over time in island birds, but it is hard to observe modern inter-island migration. But we found a lucky breadcrumb: an F1 inter-island hybrid (formerly intergrade, now split).

21.11.2025 18:29 πŸ‘ 3 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
A three part figure. First, a Sankey diagram showing that very few SLiM colonization simulations (discussed earlier in the thread) produced results with Makira sister to all other populations. Second, an image showing example levels of gene flow and divergence history used for coalescent simulations. Third, a complicated tile plot showing that the Makira sister pattern (i.e., biased inference) dominated for a wide range of effective population size values, mean dispersal distances, and time between splits in the phylogeny.

A three part figure. First, a Sankey diagram showing that very few SLiM colonization simulations (discussed earlier in the thread) produced results with Makira sister to all other populations. Second, an image showing example levels of gene flow and divergence history used for coalescent simulations. Third, a complicated tile plot showing that the Makira sister pattern (i.e., biased inference) dominated for a wide range of effective population size values, mean dispersal distances, and time between splits in the phylogeny.

Although we have some evidence suggesting biased inference in this system, we wanted to generalize these findings using coalescent simulations with gene flow based on island biogeographic theory. For a wide parameter space, the Makira-sister pattern dominated regardless of the split history.

21.11.2025 18:29 πŸ‘ 4 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
Figure of the Solomons showing gene flow within the Bukida group, from the Bukida group to New Georgia and Malaita, and from only Malaita to Makira. Inset shows a cartoon version of these four groups with theoretical levels of gene flow among these island groups, highlighting the isolation of Makira.

Figure of the Solomons showing gene flow within the Bukida group, from the Bukida group to New Georgia and Malaita, and from only Malaita to Makira. Inset shows a cartoon version of these four groups with theoretical levels of gene flow among these island groups, highlighting the isolation of Makira.

So what could explain the dominance of this topology? Well, it turns out the island most isolated from propagules is also most isolated from gene flow from the central Bukida group. This was both true in theory and with tests of gene flow.

21.11.2025 18:29 πŸ‘ 2 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
Video thumbnail

Indeed, when we ran simulations of colonization history with SLiM, we found that only ~1% of simulations produced a colonization history consistent with this topology. Note that the GIF has very low population size/dispersal rate for visualization.

21.11.2025 18:29 πŸ‘ 4 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0