Akanksha Thawani, PhD's Avatar

Akanksha Thawani, PhD

@akankshathawani

Assistant Professor, Columbia University | Mobile elements, Structural biology and Genome engineering | http://thawanilab.org

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28.01.2025
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Latest posts by Akanksha Thawani, PhD @akankshathawani

Redirecting

Our most recent work on the “function and evolution” of #nuclear-speckles is now online at Cell @cp-cell.bsky.social
doi.org/10.1016/j.ce...
Read the thread👇 for the highlights of our findings.

25.02.2026 16:01 👍 122 🔁 60 💬 9 📌 5
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Rapid compensatory evolution within a multiprotein complex preserves telomere integrity Intragenomic conflict with selfish genetic elements spurs adaptive changes in subunits of essential multiprotein complexes. Whether and how these adaptive changes disrupt interactions within such comp...

How to keep in step when your (protein) partner speeds up…

Here we investigated the adaptive remodeling of a protein-protein interaction surface essential for telomere protection.

Congrats to whole team!

www.science.org/doi/10.1126/...

28.11.2025 17:22 👍 120 🔁 64 💬 6 📌 4
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Excited to share our new preprint in collaboration with Ahmet Yildiz's lab. Check out how our team uncovers a novel binding footprint and motor regulation mechanism for MAP9 Congrats to Burak Cetin and @aryantaheri.bsky.social

www.biorxiv.org/content/10.1...

18.11.2025 22:43 👍 59 🔁 20 💬 1 📌 1
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📢 Our Dept. of Systems Biology at Columbia University has an open tenure-track Assistant Professor position in the broad area of quantitative biology. Come join our awesome department in NYC! Please circulate.
apply.interfolio.com/177622
Suggested deadline: 12/15/2025.
@columbiasysbio.bsky.social

15.11.2025 04:02 👍 31 🔁 37 💬 0 📌 1
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Human RPA is an essential telomerase processivity factor for maintaining telomeres Telomerase counteracts telomere shortening by repeatedly adding DNA repeats to chromosome ends. We identified the replication protein A (RPA) heterotrimer as a telomerase processivity factor critical ...

Our paper in Science is out! @souravagrawal.bsky.social, @rlynn.bsky.social, @susvirkar.bsky.social, and the rest of the team show human RPA is a telomerase processivity factor essential for telomere maintenance. This reshapes our thinking about telomerase regulation. www.science.org/doi/10.1126/...

30.10.2025 22:07 👍 124 🔁 41 💬 10 📌 5

Great work from our future neighbor!

17.10.2025 23:19 👍 4 🔁 0 💬 0 📌 0

Check out this extremely cool work by @fueyoraquel.bsky.social on how human specific ERVs contribute to early development!

01.10.2025 21:14 👍 3 🔁 0 💬 1 📌 0
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A miniature CRISPR–Cas10 enzyme confers immunity by inhibitory signalling - Nature Panoptes, an anti-phage defence system against virus-mediated immune suppression, is revealed.

Today in @nature.com , we highlight how a cousin of CRISPR-Cas10, mCpol, establishes an evolutionary trap in anti-phage immune systems.

Check out @erinedoherty.bsky.social and my work from @doudna-lab.bsky.social lab here:
www.nature.com/articles/s41...

01.10.2025 17:56 👍 109 🔁 54 💬 3 📌 2

Thank you Flora!

20.08.2025 14:56 👍 1 🔁 0 💬 0 📌 0

🧪 We’re hiring at all levels! If you're interested in transposons, genome biology, cryoEM, RNA, chromatin, or genome engineering—let’s talk! Particularly interested in enthusiastic technicians and postdoctoral fellows!

Email me and check out our lab website to learn more! #TeamScience #WeAreHiring

19.08.2025 17:00 👍 3 🔁 1 💬 0 📌 0

Grateful for many other supporters in this journey: the entire @leadingedgeprogram.bsky.social community, @bwfund.bsky.social, @damonrunyon.org, and a number of mentors within and outside @ucberkeleyofficial.bsky.social. It's been a joy ride!

19.08.2025 17:00 👍 2 🔁 0 💬 1 📌 0

Huge thanks to my incredible mentors—Eva @nogaleslab.bsky.social, Kathy Collins and members of these two labs for their support and generosity during my postdoc. I've learned so much from you.

19.08.2025 17:00 👍 1 🔁 0 💬 1 📌 0
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The Thawani Lab at Columbia University The Thawani Lab at Columbia University describing their research on mobile genome, cryo-electron microscopy and genome engineering

Extremely excited to share that I’m joining Columbia University @columbiauniversity.bsky.social as an Assistant Professor!

We will explore how the mobile genome works—how transposons shape us, our DNA and how they can be harnessed to build useful technologies. #NewPI #RNAsky #TEsky

thawanilab.org

19.08.2025 17:00 👍 134 🔁 34 💬 10 📌 1

Congrats Luuk!

18.08.2025 20:19 👍 1 🔁 0 💬 1 📌 0
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RNA N-glycosylation enables immune evasion and homeostatic efferocytosis by chemically caging acp3U. Excited to report this work lead by Vinnie @vinnieviruses.bsky.social and in collaboration with @vijayrathinam.bsky.social in @nature.com www.nature.com/articles/s41...

06.08.2025 15:36 👍 108 🔁 46 💬 7 📌 2
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Looking forward to this new installment of the Woods Hole Mobile DNA Meeting! Fantastic program, laid-back atmosphere, and gorgeous setting at the Marine Biological Laboratory ⛵️🪼🐋
Abstract submission closes Aug 7 but registration after that date is possible. www.eventsquid.com/event.cfm?ev...

05.08.2025 20:47 👍 24 🔁 13 💬 0 📌 0
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Many proteins bind RNA, yet we still don’t know what RNAs most bind because methods map one RBP at a time. In @cp-cell.bsky.social, with the Jovanovic lab, we describe SPIDR – a method for mapping the RNA binding sites of dozens of RBPs in a single experiment. www.sciencedirect.com/science/arti...

26.07.2025 19:15 👍 99 🔁 37 💬 1 📌 2
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Structural basis for the evolution of a domesticated group II intron–like reverse transcriptase to function in host cell DNA repair | PNAS A previous study found that a bacterial group II intron–like reverse transcriptase (G2L4 RT) evolved to function in double-strand break repair (DSB...

#TEsky Structural basis for the evolution of a domesticated group II intron–like reverse transcriptase to function in host cell DNA repair doi.org/10.1073/pnas...

01.08.2025 15:21 👍 30 🔁 8 💬 0 📌 1
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Group Leader – Molecular Systems Biology Unit Are you ready to lead groundbreaking research in Molecular Systems Biology? Join us at EMBL! We are seeking a motivated scientist to lead an independent research group, addressing original biological ...

Ready to lead pioneering research that bridges systems-level investigations of biological systems to molecular mechanism? The EMBL Molecular Systems Biology Unit in Heidelberg is hiring a Group Leader!

30.07.2025 15:14 👍 72 🔁 78 💬 1 📌 1

🦠🧍‍♀️From bacterial to human immunity.

We report in @science.org the discovery of a human homolog of SIR2 antiphage proteins that participates in the TLR pathway of animal innate immunity.
Co-led wt @enzopoirier.bsky.social by D. Bonhomme and @hugovaysset.bsky.social

www.science.org/doi/10.1126/...

24.07.2025 18:22 👍 262 🔁 122 💬 9 📌 11
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Junior, Assistant, or Associate Specialist – Xue Lab University of California, Irvine is hiring. Apply now!

The Xue lab at UC Irvine is looking for a staff scientist to support our work investigating how microbes interact and evolve in the gut microbiome! Open to a wide range of previous experience levels, see ad for more.
recruit.ap.uci.edu/JPF09601

17.07.2025 20:32 👍 117 🔁 112 💬 0 📌 3

Congrats @kedmonds.bsky.social @maxewilkinson.bsky.social et al on your beautiful work being out!

03.07.2025 06:26 👍 1 🔁 0 💬 0 📌 0
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Transcriptional and post-transcriptional regulation of transposable elements and their roles in development and disease - Nature Reviews Molecular Cell Biology Transposable elements (TEs) comprise nearly half of the human genome. This Review discusses transcriptional and post-transcriptional mechanisms that repress TE activity, how TEs escape this suppressio...

We wrote a review on Transposable Elements (TEs) and almost all aspects of TE silencing and their roles in biological processes & disease.
www.nature.com/articles/s41...

30.06.2025 13:11 👍 142 🔁 69 💬 2 📌 3
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Deeply touched and honored by the Universidad Autónoma de Madrid, my alma mater, (@uam.es) making me Doctor Honoris Causa. Thank you to the Department of Physical Chemistry for nominating me for this recognition. It was a memorable day for me and my family👩‍🎓

24.06.2025 19:53 👍 40 🔁 3 💬 0 📌 0
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Like a dream, my name next to that of @isabelallende.com, and to be recognized by Universidad Internacional Menéndez Pelayo UIMP. Soon after, Irene Vallejo @irenevalmore.bsky.social will receive the same honor. I feel proud to be linked to these truly inspiring, talented women! Thank you UIMP!

24.06.2025 17:03 👍 14 🔁 2 💬 1 📌 0

Structures of vertebrate R2 retrotransposon complexes during target-primed reverse transcription and after second-strand nicking pubmed.ncbi.nlm.nih.gov/40540573/ #cryoEM

21.06.2025 15:48 👍 4 🔁 4 💬 0 📌 1
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Structures of vertebrate R2 retrotransposon complexes during target-primed reverse transcription and after second-strand nicking Cryo-EM and functional analyses reveal features of vertebrate R2 retrotransposon proteins that support transgene insertion.

Link to the article: www.science.org/doi/10.1126/...

23.06.2025 16:19 👍 5 🔁 0 💬 1 📌 0

It was a joy ride to be working on this project alongside Anthony Rodríguez-Vargas, @nozhathassan.bsky.social, Briana Van Treeck and my fearless mentors Kathy and @nogaleslab.bsky.social!

And thanks for the very important support from the NIH, @hhmi.org and @damonrunyon.org for this work! (5/n)

23.06.2025 16:19 👍 4 🔁 0 💬 1 📌 0
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Besides the initiation of insertion, we could also determine the #cryoEM structure of another biochemical intermediate where the first strand synthesis and second strand nicking has completed (4/n)

23.06.2025 16:19 👍 4 🔁 0 💬 1 📌 0
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The expanded zinc finger array within these new R2s covers the upstream target site entirely to enable more precise junction formation (3/n)

23.06.2025 16:19 👍 4 🔁 0 💬 1 📌 0