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Enrico Sandro Colizzi

@escolizzi

Tenured scientist @INRIA, Lyon. Studying how microbes evolve new stuff with computer simulations.

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Latest posts by Enrico Sandro Colizzi @escolizzi

The take-home message is: Multicellular reproduction can be a rewired unicellular program.

Please see the pre-print: bit.ly/4rr2mHU
Plenty more detail in the paper, plus some nice extra results.

End.

10.03.2026 19:56 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

So to recap:

➑️ Early developmental programs evolve from the ecological dynamics of the unicellular ancestor.

➑️ Depending on resource distribution, our model yields different multicellular life cycles, including some that reproduce via unicellular propagules.

10.03.2026 19:56 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Why this matters: it suggests a general route to early development.

New multicellular traits can appear by co-opting existing regulation, repurposing when/where effector genes act.

In our model, the coupling of cell state (behaviour) and adhesion is what gets co-opted to generate propagules.

10.03.2026 19:56 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
Re-playing the evolutionary steps from the unicellular ancestors to a multicellular group that reproduces through propagules: the adhesion mechanism of the ancestor becomes co-opted (incorporated) in the multicellular life-cycle.

Re-playing the evolutionary steps from the unicellular ancestors to a multicellular group that reproduces through propagules: the adhesion mechanism of the ancestor becomes co-opted (incorporated) in the multicellular life-cycle.

Answer: co-option is pervasive.

The mechanism that makes propagules in the multicellular stateβ€”low adhesion during the dividing stateβ€”is co-opted from the ancestral unicellular life cycle, and repurposed during the transition to multicellularity to make offspring.

10.03.2026 19:56 πŸ‘ 4 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

We then wondered how propagules evolved.

Are they constructed from scratch? Do they co-opt pieces of the unicellular ancestor?

Because it’s a computational model, we have the full fossil record. We can literally rewind evolution and watch the steps, generation by generation.

10.03.2026 19:56 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
Following a single cell within a cluster - as it transition from high adhesion and migratory to down-regulating adhesion and dividing - thus forming a propagule. The cell then divides and the two offspring adhere to each other and migrate as a small offspring cluster.

Following a single cell within a cluster - as it transition from high adhesion and migratory to down-regulating adhesion and dividing - thus forming a propagule. The cell then divides and the two offspring adhere to each other and migrate as a small offspring cluster.

Mechanistically, propagule formation is driven by a regulatory switch: cells stick strongly while migrating, but once fed they reduce adhesion and switch into division. Dividing cells then peel off as propagules (follow the white border cell).

10.03.2026 19:56 πŸ‘ 3 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0
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When food patches are near, only unicellular solutions evolve: by not sticking cells disperse better and reach resources faster.

At intermediate patchiness, multicellular groups produce propagules. The group migrates rapidly towards food, and propagules colonise new patchesβ€”best of both worlds.

10.03.2026 19:56 πŸ‘ 2 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
When resources are more homogeneously distributed, the system evolves unicellular solutions, when resources are patchy and far apart, multicellular life cycles evolve, including propagules and for high resource heterogeneity group splitting.

When resources are more homogeneously distributed, the system evolves unicellular solutions, when resources are patchy and far apart, multicellular life cycles evolve, including propagules and for high resource heterogeneity group splitting.

Why do different life cycles evolve?

Well, cells survive if they eat. So resource distribution is the key parameter.

When food is far apart, adhesion enables collective migration (see: bit.ly/4s9YIUa). So selection favours groups that reproduce by splittingβ€”each daughter already functional.

10.03.2026 19:56 πŸ‘ 4 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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And it’s not just this outcome.

From the same ingredients, we get a whole zoo of possible solutions: unicellular life cycles, single-cell and multicellular propagules (in the video), and large groups that split by tearing themselves apart.

10.03.2026 19:56 πŸ‘ 3 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0
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Over generations, cells evolve adhesion and form multicellular groups.

But then: how does a group reproduce? In many runs, groups release single-cell propagules that detach and grow into new groups.

Single-cell propagules are everywhere in multicellular lifeβ€”and here they evolve spontaneously 😎

10.03.2026 19:56 πŸ‘ 7 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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In the model, each cell carries a gene regulatory network: a small circuit controlling when to forage, divide, and stick to other cells.

Mutations during division rewire the network, so these behaviours evolve. Cells that do not eat die.

That’s it! Mutation + selection. Can development evolve?

10.03.2026 19:56 πŸ‘ 2 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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With @alefern.bsky.social and @renskevroomans.bsky.social, we built a model to fully recapitulate the transition.

But we didn’t want to pre-suppose any particular life cycle β€” we wanted them to evolve from scratch.

So we started simple: cells move (red) towards food (brown), and divide (blue).

10.03.2026 19:56 πŸ‘ 3 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Multicellularity makes reproduction... weird.
Single cells reproduce by division 🦠➑️🦠🦠
But multicellular life often reproduces via developmental programs: gene regulation, cell differentiation, etc.

Where do the first multicellular programs come from, before dedicated developmental machinery exists?

10.03.2026 19:56 πŸ‘ 6 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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Curious about the origin of development during the transition to multicellularity?

A very belated preprint alert: bit.ly/4rr2mHU
Reproduction emerges from ecological interactions at the onset of multicellularity.

A short 🧡 with lots of videos...

10.03.2026 19:56 πŸ‘ 83 πŸ” 30 πŸ’¬ 2 πŸ“Œ 6

Why this matters: it suggests a general route to early development.

New multicellular traits can appear by co-opting existing regulation, repurposing when/where effector genes act.

In our model, the coupling of cell state (behaviour) and adhesion is what gets co-opted to generate propagules.

10.03.2026 19:05 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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In case you missed it: our review titled "Spatial structure: shaping the ecology and evolution of microbial communities" is out! 🚨

Let me hit you with some highlights on why spatial structure matters. (and why you should care!)

Sharing is appreciated πŸ™ πŸ§΅πŸ‘‡

doi.org/10.1093/fems...

25.02.2026 13:06 πŸ‘ 137 πŸ” 83 πŸ’¬ 3 πŸ“Œ 2

That a tiny polymerase ribozyme exists is good news *especially* for metabolism-first models of OoL, because it makes it easier to picture genetic memory emerging gradually within a self-maintaining proto-metabolic system.

13.02.2026 15:24 πŸ‘ 6 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0
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Spatial structure: shaping the ecology and evolution of microbial communities Spatial structure naturally emerges in microbial communities, shaping growth, interactions, and evolution, and revealing how microscale processes scale up

Most microbes don't live in shaking flasks; spatial structure shapes how microbes interact and evolve at every scale, as we discuss in our recent review @jeroenmeijer.bsky.social @simonvanvliet.bsky.social @bedutilh.bsky.social @bramvandijk.bsky.social and others
academic.oup.com/femsre/artic... πŸ§΅πŸ‘‡

12.02.2026 15:46 πŸ‘ 50 πŸ” 28 πŸ’¬ 2 πŸ“Œ 3
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Bridging the gap from chemistry to life: discovery of a tiny RNA that can copy itself | MRC Laboratory of Molecular Biology Led by Edoardo Gianni, Philipp Holliger’s group in the LMB’s PNAC Division have identified a small self-replicating catalytic RNA (ribozyme), providing new ...

Have a look at the Insight on Research story on our Science paper www.science.org/doi/10.1126/... on the @mrclmb.bsky.social website: mrclmb.ac.uk/news-events/... including a great little animation from LMB VisLab.

13.02.2026 11:33 πŸ‘ 14 πŸ” 6 πŸ’¬ 0 πŸ“Œ 0
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A small polymerase ribozyme that can synthesize itself and its complementary strand The emergence of a chemical system capable of self-replication and evolution is a critical event in the origin of life. RNA polymerase ribozymes can replicate RNA, but their large size and structural ...

Great summaries of our paper www.science.org/doi/10.1126/... in Science: www.science.org/doi/epdf/10.... and New Scientist: www.newscientist.com/article/2515... and in the Science museum blog: blog.sciencemuseum.org.uk/in-the-begin...

13.02.2026 11:03 πŸ‘ 9 πŸ” 3 πŸ’¬ 0 πŸ“Œ 0
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New paper from my group in @science.org : "A small polymerase ribozyme that can synthesise itself and its complementary strand" www.science.org/doi/10.1126/...
Outstanding work by @edogia.bsky.social

13.02.2026 10:57 πŸ‘ 149 πŸ” 39 πŸ’¬ 1 πŸ“Œ 5
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How did life arise from simple chemical building blocks?

New #LMBResearch led by @edogia.bsky.social in @philholliger.bsky.social group has identified a small self-replicating ribozyme that could be the answer.

Read more: mrclmb.ac.uk/news-events/...

13.02.2026 10:20 πŸ‘ 52 πŸ” 31 πŸ’¬ 0 πŸ“Œ 2
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A small polymerase ribozyme that can synthesize itself and its complementary strand The emergence of a chemical system capable of self-replication and evolution is a critical event in the origin of life. RNA polymerase ribozymes can replicate RNA, but their large size and structural ...

How could a simple self-replicating system emerge at the origins of life? RNA polymerase ribozymes can replicate RNA, but existing ones are so large that their self-replication seems impossible. Could they be smaller?

Excited to share our latest work in @science.org on a new small polymerase.
1/n

13.02.2026 11:42 πŸ‘ 498 πŸ” 210 πŸ’¬ 10 πŸ“Œ 28

Very nice review! Congrats to all the authors.

12.02.2026 15:30 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Spatial structure: shaping the ecology and evolution of microbial communities Spatial structure naturally emerges in microbial communities, shaping growth, interactions, and evolution, and revealing how microscale processes scale up

Wrapping up a productive week: very glad to have contributed to this review on how spatial structure shapes microbial ecology and evolution, led by @marcelbaecker.bsky.social, @bedutilh.bsky.social, @bramvandijk.bsky.social and many others. doi.org/10.1093/fems...

11.02.2026 15:46 πŸ‘ 39 πŸ” 15 πŸ’¬ 3 πŸ“Œ 2

New year, new conferences! Consider submitting to the symposium on Fitness landscapes and Genotype-phenotype maps, linking computational and experimental approaches (organising with @n-martin.bsky.social; @dbajic.bsky.social invited spreaker) at SMBE (28/6-2/7)! Abstract deadline February 3rd!

09.01.2026 10:37 πŸ‘ 9 πŸ” 6 πŸ’¬ 0 πŸ“Œ 1
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Bottleneck size drives the evolution of cooperative traits in an aggregative multicellular myxobacterium Population bottlenecks shape the evolution of cooperative traits in Myxococcus xanthus through life cycle trade-offs. This study shows that stringent bottlenecks favor growth and sporulation, while re...

Very cool paper by Jyotsna Kalathera et al. from @iamsamayp.bsky.social 's-lab on

Bottleneck size drives the evolution of
cooperative traits in an aggregative multicellular
myxobacterium

just out @plosbiology.org

Congratulations to all coauthors.

journals.plos.org/plosbiology/...

07.01.2026 11:56 πŸ‘ 16 πŸ” 9 πŸ’¬ 1 πŸ“Œ 0
Interior of Sainsbury Laboratory building showing experimental laboratories on left with floor-to-ceiling glass facing into the main central avenue with people walking on stairs and sitting at study boxes. Lots of natural light and views to the Cambrdge University Botanic Garden. Overlay text "Join SLCU" and logos and closing date of 15 January 2026.

Interior of Sainsbury Laboratory building showing experimental laboratories on left with floor-to-ceiling glass facing into the main central avenue with people walking on stairs and sitting at study boxes. Lots of natural light and views to the Cambrdge University Botanic Garden. Overlay text "Join SLCU" and logos and closing date of 15 January 2026.

🌱 2x David Sainsbury Career Development Fellowships at @slcuplants.bsky.social

Unique opportunity for early-career researchers to launch their own independent research programme in quantitative plant development, with generous support & world-class facilities.

www.cam.ac.uk/jobs/david-s...

11.12.2025 11:45 πŸ‘ 39 πŸ” 41 πŸ’¬ 0 πŸ“Œ 2
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Pyocyanin produced by Pseudomonas aeruginosa Creates Legacy Effects That Boost Antibiotic Resistance Evolution in Enterococci Polymicrobial infections are small communities of multiple interacting bacterial species. Interactions among constituent species may modify the growth of community members in the presence of antibioti...

New preprint:
www.biorxiv.org/content/10.6...

05.12.2025 14:27 πŸ‘ 17 πŸ” 9 πŸ’¬ 1 πŸ“Œ 1
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The fitness costs of reproductive specialization scale inversely with organismal size The evolution of reproductive specialization represents a fundamental innovation in multicellular life, yet the conditions favoring its evolution remain poorly understood. Here, we develop a populatio...

1/28 New preprint up, which I think is the best theoretical idea I've ever had. We asked a simple question: what are the costs of investment into non-reproductive somatic cells? Turns out these costs decrease with the *logarithm* of organism size!

www.biorxiv.org/content/10.6...

09.12.2025 19:43 πŸ‘ 154 πŸ” 68 πŸ’¬ 6 πŸ“Œ 3