We can't wait to see you in Valencia this summer at VALT! Check out our exciting Line up of speakers below. Interested in sharing your work on #LongReadTranscriptomics ? Abstract submission deadline 📅 March 31st.
#LongTREC #LongReadSequencing #Nanopore #Pacbio
We can't wait to see you in Valencia this summer at VALT! Abstract submission deadline 📅 March 31st.
#LongReadsTranscriptomics
New preprint on #LongReadTranscriptomics from @fabianjetzinger.bsky.social #LongTREC. How you combine replicates in long-read experiments matters more than you think — it shapes detection of both known and novel transcripts! A must read for Long read RNA-seq users!
www.biorxiv.org/content/10.6...
There is an open post doc position for a computational biologist at the SciLifeLab National Genomics Infrastructure, Uppsala University. A great opportunity to work with us on the latest in long-read sequencing and other genome technologies! www.uu.se/en/about-uu/...
Dont miss any of our #LongTREC communications at #ISMBECCB2025. Download this flyer to make catching all the latest & hottest long-read transcriptomics research simple.
@anaconesa.bsky.social
We're very excited to see all the brilliant science here this week at #ISMBECCB2025. Make sure to keep an eye out for talks from our network all week! #longreadTranscriptomics
What a great week at @earlhaminst.bsky.social, spent together with the awesome @longtrec.bsky.social folks! Learned a lot and had some great discussions about long-reads sequencing analysis! 🙌🏻💡
Big thanks to @anaconesa.bsky.social and everyone who made it happen! 👏🏼
The @longtrec.bsky.social Summer School in LR-RNAseq is now finished, but not our sustainable trip. From Norwich 2 London by train, drop the bikes and train again to Liverpool to attend #ISMB/ECCCB2025, and continue talking about long-reads and sustainability @iscb.bsky.social @hitseq.bsky.social
Thank you for hosting us!!! The LongTREC summer school has been a great success and the amazing
@earlhaminst.bsky.social facilities ensured a smooth and enjoyable week for all involved. #LongTREC #SummerSchool
A great week-long summer school on #longread #bioinformatics with the @longtrec.bsky.social Doctoral Network!
LongTREC brings together scientists from across Europe to train the next generation of #computationalbiologists to develop novel applications from #transcriptomic data. 🖥️🧬
longtrec.eu
@whaerty.bsky.social @anaconesa.bsky.social @cianagalis.bsky.social @i2sysbio.es
What a Week!! A nice summary of our Summer School in #LongReadsTranscriptomics at the @earlhaminst.bsky.social
Our Doctoral Candidates have delivered outstanding training sessions on a wide range of scientific topics, and the response has been incredible!
#SustainableResearch #SummerSchool
Day 4 of the #LongTREC #SummerSchool has started! This morning, @eamonmc.bsky.social and Juan Francisco Cervilla Martínez will cover Single-cell transcriptomics with #LongReads
#LongReadsTranscriptomics #SingleCellTranscriptomics
We couldn't end the #LongTREC Summer School without talking about #SustainableResearch
We have (at least tried) to raise awareness about the impact of our travel. No surprise that the most sustainable of all travellers were our LongTREC cyclists!
@anaconesa.bsky.social
On the home stretch - Just 30 KM left to Norwich!
#LongCyclingForScience #SustainableScience #LongReadsTranscriptomics
📽️ From 🌞 Valencia: Meet Fabian Jetzinger in the LongTREC Series!
Fabian is a Doctoral Candidate at BioBam Bioinformatics, working under the supervision of Stefan Götz, PhD. He is working to make the analysis of long-read RNA sequencing data more user-friendly in #OmicsBox
tinyurl.com/nkszjjm5
📽️ Next in the LongTREC Series: Mahmud Sami Aydin!
Sami is a Doctoral Candidate at @stockholm-uni.bsky.social , working under the supervision of @ksahlin.bsky.social .In this video, Sami shares his research and his role in the broader LongTREC collaboration across Europe.
#AlgorithmDevelopment
🌊 Exploring the Ocean’s Genetic Secrets! Guided by @jm-aury.bsky.social and France Denoeud, @lafucarmen.bsky.social Doctoral Candidate at Genoscope - Centre National de Séquençage, shares how she's using long-reads on marine samples from the Tara Oceans expedition to explore genetic novelty.
📽️ Next in the LongTREC Series: Tianyuan Liu!
tianyuanliu.bsky.social is a Doctoral Candidate at @i2sysbio.es under the supervision of @anaconesa.bsky.social He explains the question he wants to answer: "How does the exact chromatin landscape at a promoter decide which RNA isoform is made?"
Next up in our LongTREC video series is Leda Katopodi!
Leda is doing exciting research at @crg.eu, working with
@evamarianovoa.bsky.social
to explore the role of epitranscriptomic modifications of #tRNAs in cancer and beyond!
#CancerResearch #tRNAs #RNAMods #Epitranscriptomics
🎥 The LongTREC video Continues: Juan Francisco Cervilla Martínez! Juan Francisco is a Doctoral Candidate at the @earlhaminst.bsky.social , working under the supervision of Wilfried Haerty. His research focuses on long-read single-cell transcriptomics to uncover Isoform usage within single cells.
A brief summary of the #LongCyclingForFuture bike trip that our LongTREC bikers have made from London to Norwich, passing via Cambridge. Join us to congratulate them on this adventure while raising awareness of the carbon footprint impact of scientific travel.
@anaconesa.bsky.social
📣 We have kicked off at the Earlham Institute, and everyone is to learn all about #LongReadsTranscriptomics at our #LongTREC Summer School.
Starting with an introduction of our network from @anaconesa.bsky.social and a quick getting to know our participants - both trainers and trainees!
Day 1 of our #SummerSchool : @carolinamonzo.bsky.social , Satrio Wibowo, Mahmud Sami Aydin and @tianyuanliu.bsky.social introducing participants to #LongReads sequencing technologies, how to design #lrRNAseq experiments, library preparation strategies for #lrRNAseq, mapping, QC and more!
🌎🗣️ First day at the LongTREC #SummerSchool @earlhaminst.bsky.social and the energy is already incredible!
It’s amazing to see how quickly meaningful connections are forming. Scientific progress doesn’t happen in isolation — it’s built through collaboration, shared knowledge, and open dialogue.
It has been very exciting to meet all the participants and their eagerness to learn about #LongReadsTranscriptomics
We made it!!!! València-London by train. London-Norwich by bike!!!
Almost there!!
Not everyone can or wants to cycle for 2–3 days, but we can all take a moment to ask ourselves:
💡 “How much am I impacting the planet with this trip?”
💡 “What can I do to reduce that impact?”
@anaconesa.bsky.social
#LongCyclingForScience #SustainableScience #LongReadsTranscriptomics
Next Up in the #LongTREC Series 📽️ : Yalan Bi!
Yalan is a LongTREC Doctoral Candidate working with Ralf Herwig at @molgen.mpg.de Yalan shares insights into her research project and her experience as part of the LongTREC network. #LongReadsTranscriptomics #AlternativeSplicing #ProteinInteraction
