If you're studying #RNA transcript isoforms, check out IsoVis (the Isoform Visualiser webserver). isomix.org/isovis/
Recent updates now also allow visualisation of:
1. RNA modification sites and levels
2. Peptides mapping to open reading frames in isoforms and their abundances. 🧪
A photo of a researcher looking into a microscope. On top of the photo, a text reading: "Apply now to the SciLifeLab PULSE Postdoc program. Application period open: December 15, 2025–March 16, 2026" and two logotypes: SciLifeLab's, and a version of the EU logotype reading "Co-funded by the European Union"
Our call for 27 PULSE #postdocs is OPEN!
PhD within the last 3 years looking to grow your life science career? SciLifeLab PULSE (MSCA Cofund) offers 3-year postdoc fellowships at Swedish universities with academic & industry secondments 🧪 🖥️ 🧬
📅 Apply Dec 15, 2025-Mar 16, 2026
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We're hiring! My team at @nygenome.org is looking for a statistical genetics postdoc to decipher functional architecture of complex diseases from cutting-edge CRISPR+scRNA-seq data, with @nevillesanjana.bsky.social lab. Happy to meet at #ASHG25, apply here
jobs.silkroad.com/NYGenome/Car...
Congratulations Ric and @michaelbclark.bsky.social!
Great work Yupei!
Very excited to see our latest paper published!
No prob! Definitely doable, dRNA will be less biased than cDNA but may not get you the best depth. We had a post-mortem brain sample at RIN 7.8 and it still looked ok. I'd just advise using the RIN as a cofactor in analysis if you have varied samples.
You can check out our paper here but we only went to a minimum of 7: doi.org/10.1093/narg.... Probably wouldn't advise doing it with much lower... depends what you want to see!
New preprint! My (now former) postdoc @kvastad.bsky.social led this integration of GWAS and spatial transcriptomics (ST) data to identify tissue structures with enrichment of disease-implicated genes = likely causal drivers of disease biology.
www.biorxiv.org/content/10.1...
Weird, for some reason I always thought amino acids would be way bigger!
