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Masato Yamamichi

@masatoyamamichi

Associate Professor at the National Institute of Genetics / SOKENDAI / UTokyo https://sites.google.com/view/yamamichi-lab/home

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10.12.2024
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Latest posts by Masato Yamamichi @masatoyamamichi

We found that increasing the amplitude of environmental fluctuations around long-term deteriorating trends has negative and positive effects on evolutionary rescue by combining mathematical model simulations and experimental evolution of Chlorella vulgaris under increasing salinity.

07.03.2026 00:57 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Our second paper on algal experiments at @nigidenken.bsky.social with @shotashibasaki.bsky.social is finally out in @journal-evo.bsky.social! "The double-edged effect of environmental fluctuations on evolutionary rescue" doi.org/10.1093/evol... bsky.app/profile/bior...

07.03.2026 00:34 ๐Ÿ‘ 10 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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Higher genetic variance of prey defence promotes fluctuation-dependent species coexistence Abstract. Understanding stable coexistence of competing species despite the competitive exclusion principle has been a central topic in ecology. Previous s

A new paper in Biology Letters! "Higher genetic variance of prey defence promotes fluctuation-dependent species coexistence" @royalsocietypublishing.org doi.org/10.1098/rsbl...

06.03.2026 03:28 ๐Ÿ‘ 9 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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New research from #BiologyLetters: Higher genetic variance of prey defense promotes fluctuation-dependent species coexistence royalsocietypublishing.org/rsbl/article... | #Ecology #Evolution

05.03.2026 12:00 ๐Ÿ‘ 7 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
ESJ73 ใ‚ทใƒณใƒใ‚ธใ‚ฆใƒ  S14-4

We will have the following 8 presentations at the ESJ meeting in Kyoto next week!
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03.03.2026 00:10 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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We are pleased to be back for another year! Join us next Thursday 1pm AEST.

Deepa Agashe (NCBS) @deepaagashe.bsky.social will present a seminar titled:

Founders, shapers: Colonizing individuals predict trait and population dynamics in new habitats

Sign up form below โฌ‡๏ธ โฌ‡๏ธ โฌ‡๏ธ

19.02.2026 03:14 ๐Ÿ‘ 9 ๐Ÿ” 5 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 1
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'Modeling evolutionary rescue' doi.org/10.32942/X25...

10.02.2026 17:31 ๐Ÿ‘ 21 ๐Ÿ” 10 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 2
NIG Meetings::National Institute of Genetics NIG is the research institute on genetics. Our mission is to provide infrastructure and opportunities for international collaboration, to train young scientists, and to build new frontiers of life sci...

A NIG-JOINT research meeting on population genetics will be held in March at @nigidenken.bsky.social "Population genetics in the era of population genomics" www.nig.ac.jp/nig/research...

14.01.2026 06:52 ๐Ÿ‘ 3 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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British Ecological Society Annual Meeting 2025 Agenda on Whova December 15 โ€“ 18, 2025, Edinburgh, Scotland

At #BES2025 in Edinburgh, Takahisa Ueno will give a poster presentation entitled "Synthesizing modern coexistence theory (MCT) and biodiversity-ecosystem functional stability (BEFS)" on Tuesday! whova.com/embedded/ses...

16.12.2025 00:00 ๐Ÿ‘ 3 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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ๅฏพ็ซ‹ใŒๅ…ฑๅญ˜ใ‚’็”Ÿใ‚€ใ‚ขใƒชใฎ็พค้›†็”Ÿๆ…‹ๅญฆ ๏ฝžๅŒใ˜็’ฐๅขƒใซๅคšๆ•ฐใฎ็จฎใŒๅ…ฑๅญ˜ใ™ใ‚‹ใ‚ขใƒชใฎ่ฌŽใ‚’ๅฎŸ้จ“็š„ใซ่งฃๆ˜Ž๏ฝž | ็‰็ƒๅคงๅญฆ ็‰็ƒๅคงๅญฆ ่พฒๅญฆ้ƒจ ่พปๆ•™ๆŽˆใ€้นฟๅ…ๅณถๅคงๅญฆ้€ฃๅˆๅคงๅญฆ้™ขใจๅ›ฝ็ซ‹้บไผๅญฆ็ ”็ฉถๆ‰€ใฎ็ ”็ฉถใƒใƒผใƒ ใซใ‚ˆใ‚‹ๆˆๆžœใŒใ€็ฑณๅ›ฝ็”Ÿๆ…‹ๅญฆไผš่ชŒใ€ŒE

ใƒ—ใƒฌใ‚นใƒชใƒชใƒผใ‚นใ‚‚ๅ‡บใพใ—ใŸใ€‚ www.u-ryukyu.ac.jp/news/72988/

11.12.2025 01:24 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Measuring competition coefficients in an ant community: Implications for intraspecific adaptation load Understanding the stable coexistence of species despite resource competition has been a central topic in ecology. Ant communities are particularly enigmatic as various species coexist despite resourc....

We published a new paper in Ecology @ecologicalsociety.bsky.social entitled "Measuring competition coefficients in an ant community: Implications for intraspecific adaptation load" doi.org/10.1002/ecy....

09.12.2025 11:51 ๐Ÿ‘ 15 ๐Ÿ” 3 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
Poster announcing the workshop.

Poster announcing the workshop.

Join us for an @smtpb.bsky.social workshop on Modern Coexistence Theory. We'll cover mathematical foundations, the theory of partitioning, and data-based applications. Featuring @swatipatel.bsky.social, Nick Kortessis, & Lauren Shoemaker. Zoom link here: smtpb.org/event-6426026

19.11.2025 18:57 ๐Ÿ‘ 55 ๐Ÿ” 42 ๐Ÿ’ฌ 3 ๐Ÿ“Œ 3
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Join us this Thursday, Hiromi Uno (Tohoku University) will give our last seminar for the year:

Insects, shrimps and fishes; river animal migrations and their ecological consequences

Sign up to this google form to receive the zoom link and future seminar announcements forms.gle/H6YgMuAgDWYS...

24.11.2025 00:24 ๐Ÿ‘ 5 ๐Ÿ” 4 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Meghna Krishnadas - Demographic responses of plants to abiotic and biotic drivers
Meghna Krishnadas - Demographic responses of plants to abiotic and biotic drivers YouTube video by PopBio on the Dark Side

Our most recent seminar from Meghna Krishnadas is now available to watch ๐ŸŒณ๐Ÿฆ ๐ŸŒณ

youtu.be/zzOS16wA9YU?...

18.11.2025 04:18 ๐Ÿ‘ 3 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Applying invasion criterion to cultural evolution https://www.biorxiv.org/content/10.1101/2025.11.12.688139v1

14.11.2025 02:31 ๐Ÿ‘ 0 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Meghna Krishnadas will present the next PopBio seminar:

The relative and interactive roles of abiotic and biotic drivers on demographic responses of plants

Join us online, Thursday Oct 30 1pm AEST.

Sign up to our mailing list to receive the zoom link: forms.gle/u7B1fyzRAwar...

23.10.2025 02:47 ๐Ÿ‘ 5 ๐Ÿ” 5 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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I-Ching Chen will present the next PopBio seminar:

Revisiting the Vulnerability of Mountain Biota under Rapid Warming

Join us online, Thursday Sep 25 1pm AEST. These seminars are open to all so please share widely.

Sign up to our mailing list to receive the zoom link: forms.gle/kb6aHitUsL5f...

22.09.2025 03:22 ๐Ÿ‘ 3 ๐Ÿ” 3 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Quantifying a trait-mediated indirect effect of an environmental stressor on population dynamics https://www.biorxiv.org/content/10.1101/2025.09.04.674171v1

08.09.2025 16:33 ๐Ÿ‘ 1 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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The genomics of discrete polymorphisms maintained by disruptive selection Disruptive selection can lead to the evolution of discrete morphs. We show that particular genetic architectures, in terms of dominance, epistasis, and linkage, are likely to evolve to produce discrete morphs under disruptive selection. Recent genomic studies have revealed that causative mutations tend to cluster, sometimes as a result of chromosomal rearrangements, but we still know little about the molecular mechanisms of dominance and epistasis. Although disruptive selection can also lead to speciation, once an optimal genetic architecture has evolved, disruptive selection no longer promotes the evolution of assortative mating. For a better understanding of the conditions that promote or constrain speciation, it is necessary to address how fast such a genetic architecture can evolve.

Online now: The genomics of discrete polymorphisms maintained by disruptive selection

05.09.2025 11:56 ๐Ÿ‘ 3 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Redirecting

A new review paper is now online @cp-trendsecolevo.bsky.social "The genomics of discrete polymorphisms maintained by disruptive selection" doi.org/10.1016/j.tr...

04.09.2025 23:58 ๐Ÿ‘ 6 ๐Ÿ” 3 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Shaopeng Wang will present the next PopBio seminar:

"Biodiversity and Ecosystem Stability Across Spatial and Temporal Scales"

Join us online, Thursday August 28 1pm AEST. These seminars are open to all!

Sign up to our mailing list to receive the zoom link: forms.gle/uRJwbK1ZacZH...

21.08.2025 11:20 ๐Ÿ‘ 9 ๐Ÿ” 8 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 1
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Joe Wan will present the next PopBio seminar:

"A unified theory of community structure"

Join us online, Thursday July 31 1pm AEST. These seminars are open to all!

Sign up to our mailing list to receive the zoom link: forms.gle/ZG8ghPoz2oX4...

24.07.2025 00:48 ๐Ÿ‘ 13 ๐Ÿ” 6 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Save the dates!

We have an excellent line up of speakers for the next three months (last Thursday of each month). These online seminars are open to all and the time of day is set for attendees in the Asia-Pacific.

Sign up to this google form to receive announcements: forms.gle/2vn885K3uLC1...

14.07.2025 00:20 ๐Ÿ‘ 10 ๐Ÿ” 11 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 1
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็ง‘ๅญฆใ€€2025ๅนด7ๆœˆๅท๏ฝœๅฒฉๆณขๆ›ธๅบ— ใ€็‰น้›†ใ€‘็ซถไบ‰ใจๅ…ฑๅญ˜ใฎ็”Ÿๆ…‹ๅญฆ

ๆœˆๅˆŠ่ชŒใ€Ž็ง‘ๅญฆใ€2025ๅนด7ๆœˆๅท
www.iwanami.co.jp/book/b101380...

ใ€็‰น้›†ใ€‘็ซถ่ตฐใจๅ…ฑๅญ˜ใฎ็”Ÿๆ…‹ๅญฆ
ใฉใฎ็”Ÿ็‰ฉใ‚‚ไป–ใฎๅ€‹ไฝ“ใ‚„ๅคšๆง˜ใช็จฎใจใฎ่ค‡้›‘ใช็›ธไบ’ไฝœ็”จใฎไธญใง็”Ÿใใฆใ„ใ‚‹ใ€‚ใ ใŒ๏ผŒใใฎไธญใงใฉใฎใ‚ˆใ†ใซ็”Ÿ็‰ฉๅคšๆง˜ๆ€งใŒๆ”ฏใˆใ‚‰ใ‚Œใฆใ„ใ‚‹ใ‹ใซใคใ„ใฆใฏใ„ใพใ ๅคšใใฎ่ฌŽใŒๆฎ‹ใ•ใ‚Œใฆใ„ใ‚‹ใ€‚ใใฎ่งฃๆ˜Žใ‚’็›ฎๆŒ‡ใ™็ ”็ฉถใ‚’็ดนไป‹ใ™ใ‚‹ใ€‚

๏ผป็‰น้›†็›ฎๆฌก๏ผฝ
็พค้›†็”Ÿๆ…‹ๅญฆใจใฏไฝ•ใ ใ‚ใ†ใ‹โ€ฆโ€ฆๅฑฑ้“็œŸไบบ

ๅคš็จฎๅ…ฑๅญ˜ใจๅคšๆง˜ๆ€งๅดฉๅฃŠใฎใƒกใ‚ซใƒ‹ใ‚บใƒ โ”€โ”€ๅค–ๆฅ็”Ÿ็‰ฉใฎ็ซถไบ‰ใŒ็คบใ™็ตฑไธ€็š„ๅŽŸ็†โ€ฆโ€ฆ้ถดไบ•้ฆ™็น”

ใƒ€ใƒผใ‚ฆใ‚ฃใƒณใฎ็ฝฎใๅœŸ็”ฃโ”€โ”€ๅคšๆง˜ใช็”Ÿ็‰ฉใฏใ„ใ‹ใซใ—ใฆๅ…ฑๅญ˜ใ—ใฆใ„ใ‚‹ใฎใ‹๏ผŸโ€ฆโ€ฆ่ˆžๆœจๆ˜ญๅฝฆ

่‰่Šฑใจๆ˜†่™ซใŒ็น”ใ‚Šใชใ™ใƒใƒƒใƒˆใƒฏใƒผใ‚ฏโ€ฆโ€ฆ็ฏ ๅŽŸ็›ด็™ป

30.06.2025 09:05 ๐Ÿ‘ 12 ๐Ÿ” 3 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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Andrew Barnes @barnesecodiv.bsky.social will present our next seminar:

"Deciphering the Multitrophic Consequences of Biodiversity Change Through an Energetic Lens"

Join us online Thursday 26th June 1pm AEST!

Sign up to our mailing list to receive the zoom link forms.gle/24Y557Cjeu6w...

20.06.2025 05:16 ๐Ÿ‘ 6 ๐Ÿ” 7 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 2
An image advertising the seminar as described in the main text but with the following abstract: Microbial communities can perform complex functions that individual microbes cannot achieve alone, but enhancing these collective functions through artificial selection is challenging. Here, we examine a simple microbial system to develop a theoretical framework for understanding the conditions necessary for successful artificial selection on collectives. By analyzing whether artificial selection can effectively drive the community toward a target composition, we predict its likelihood of success under different experimental setups and identify the key parameters that influence successful selection.

An image advertising the seminar as described in the main text but with the following abstract: Microbial communities can perform complex functions that individual microbes cannot achieve alone, but enhancing these collective functions through artificial selection is challenging. Here, we examine a simple microbial system to develop a theoretical framework for understanding the conditions necessary for successful artificial selection on collectives. By analyzing whether artificial selection can effectively drive the community toward a target composition, we predict its likelihood of success under different experimental setups and identify the key parameters that influence successful selection.

Join us online this Thursday 1pm AEST.

Hye Jin Park @hyejinpark.bsky.social (Inha University) will present:

"Artificial selection for collective composition"

Sign up to receive the zoom link forms.gle/53hkcdcKPGfa...

NB. This seminar won't be recorded.

27.05.2025 00:48 ๐Ÿ‘ 6 ๐Ÿ” 6 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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A single episode of sexual reproduction can produce large variation in population growth rates under dual stressors Abstract. Sexual reproduction has been a central topic in evolutionary biology because of its many costs: why have organisms evolved sexual reproduction de

Experiments of a green alga, Closterium psl. complex, show that a single episode of sexual reproduction produces large variation in population growth rates under dual stressors, promoting evolutionary rescue:

doi.org/10.1093/jeb/...

@yawaguchi.bsky.social and @masatoyamamichi.bsky.social

26.05.2025 11:13 ๐Ÿ‘ 16 ๐Ÿ” 6 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Sexual conflict in resident species can facilitate establishment of a maladapted invader | The American Naturalist: Vol 0, No ja

A paper with Miguel Gรณmez-Llano and @adamsiepielski.bsky.social entitled "Sexual conflict in resident species can facilitate establishment of a maladapted invader" was published in Am. Nat. @asn-amnat.bsky.social! doi.org/10.1086/736568

08.05.2025 23:29 ๐Ÿ‘ 10 ๐Ÿ” 4 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
ใŸใฃใŸไธ€ๅบฆใฎๆœ‰ๆ€ง็”Ÿๆฎ–ใŒ็ตถๆป…ใ‚’้˜ฒใ๏ผš็ท‘่—ปใฎ้บไผๅญใ‚ณใƒ”ใƒผๆ•ฐใฎใฐใ‚‰ใคใใŒ็”Ÿใฟๅ‡บใ™ๅคšๆง˜ๆ€ง | ๅ›ฝ็ซ‹้บไผๅญฆ็ ”็ฉถๆ‰€ ้บไผๅญฆใฎไธญๆ ธๆ‹ ็‚นใจใ—ใฆ็”Ÿๅ‘ฝใ‚ทใ‚นใƒ†ใƒ ใฎ่งฃๆ˜Žใ‚’็›ฎๆŒ‡ใ™ๅ…ˆ็ซฏ็ ”็ฉถใ‚„ๅ…ฑๅŒๅˆฉ็”จใƒปๅ…ฑๅŒ็ ”็ฉถใ‚’ๆŽจ้€ฒใ—ใฆใ„ใพใ™ใ€‚ใพใŸใ€็ท็ ”ๅคง ๅ…ˆ็ซฏๅญฆ่ก“้™ข ้บไผๅญฆใ‚ณใƒผใ‚นใ‚’ไฝต่จญใ—ๅคงๅญฆ้™ขๆ•™่‚ฒใ‚’่กŒใฃใฆใ„ใพใ™ใ€‚

ใƒ—ใƒฌใ‚นใƒชใƒชใƒผใ‚นใ‚‚ๅ‡บใ—ใพใ—ใŸใ€‚ www.nig.ac.jp/nig/ja/2025/...

08.05.2025 23:26 ๐Ÿ‘ 1 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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PopBio on the Dark Side This is the channel of the seminar series PopBio on the Dark Side. A virtual seminar series covering research on population biology and theoretical ecology from academics in the Asia-Pacific region. W...

We have a YouTube channel!

You can see recordings of Akshit Goyal's talk from yesterday and Ryan Chisholm's talk from last month here:

www.youtube.com/@PopBio-onth...

25.04.2025 10:14 ๐Ÿ‘ 6 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0