CGEBM Aberdeen

CGEBM are running another drop-in bioinformatics clinic next Tuesday (13th January) in the IMS building atrium on the Foresterhill campus from 11:00 to 12:00. Pop by and ask us any bioinformatics questions - R, genome assembly or whatever you are currently working on.

Today's IMS PI seminar from Prof Alasdair MacKenzie focused on the role of cis-regulatory enhancers in anxiety, how these are affected by and interact with sex and early life stress, and the effects of disruption of enhancers (either by methylation or experiments) doi.org/10.1111/febs...
#Aberdeen

We are running our first bioinformatics clinic next Tuesday (9th December) in the IMS atrium on the Foresterhill campus. Drop by and ask us any bioinformatics questions - R, genome assembly or whatever you are currently working on. We will be available from 12:30 to 13:30, after the Carol Concert.

Recommendations for bioinformatics in clinical practice - Genome Medicine Background Next-generation sequencing (NGS) is well established in clinical diagnostics, and whole-genome sequencing (WGS) is increasingly becoming the method of choice, as a result of lower prices an...

Recommendations for bioinformatics in clinical practice link.springer.com/article/10.1...

Nanopore sequencing technology for clinical diagnosis of infectious diseases where laboratory capacity is meager: A case report In resource-limited settings, patients are often first presented to clinical settings when seriously ill and access to proper clinical microbial diagnostics is often very limited or non-existing. On F...

Interested in how portable sequencing could improve patient care in remote & under-resourced hospitals?

Here's a case report from Tanzania in which a mobile setup (Bento Lab + ONT MinION) helped to diagnose a child’s infection when routine tests failed!

Read more here: www.cell.com/heliyon/full...

From nematode to Nobel: How community-shared resources fueled the rise of Caenorhabditis elegans as a research organism | PNAS Experimental organisms such as the nematode Caenorhabditis elegans are fundamental to biological discovery. The success of C. elegans research has ...

C. elegans researchers were early adopters of open science: "The development of common resources and the belief that research findings and mutant strains should be freely shared has propelled worm research to the forefront"
www.pnas.org/doi/10.1073/...

I didn't manage to summarise all of @rorylcooper.bsky.social 's seminar today, but here we have sonic hedgehog inhibition pausing chicken embryo feather development at stage E9, and halting chicken embryo feather development at stage E11.
Thank you for the great talk on skin patterning.

It was great to hear about Dr Peng (Alex) Liu's research today, finding out how black carbon pollution affects developing fetuses. Many methods were featured, including proteomics to identify potential reactionary metabolites, single cell transcriptome sequencing (done by our CGEBM team) and more.

Yesterday I had the pleasure of attending the SBS seminar from @robwilsonmncn.bsky.social , looking at over 20 years of butterfly data. In Spanish mountain ranges, cold specialised species are going locally extinct and are being replaced by warmer habitat species

#UniofAberdeen #Biology #SciArt

Our bioinformatics workshops are fast approaching. More details and booking information on our training page: tinyurl.com/c5n9n6p4

Thank you for the great seminar yesterday @yorkyeast.bsky.social We heard about the systems and regulatory mechanisms involved in endosome recycling in yeast. A wide range of techniques were used for this work: membrane visualisations, genetic screenings, qPCR & more