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Smita Gopinath

@gopinath

Microbiologist and immunologist working on the vaginal microbiome. Sci-fi enthusiast.

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05.09.2023
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Latest posts by Smita Gopinath @gopinath

Canada Impact+ Research Training Awards for Postdoctoral Scholars

If you are outside Canada and looking to post-doc in Canada, University of Alberta is currently recrutiing Canada Impact + Research Post-doctoral Scholars. Deadline to submit an Expression of Interest is Feb 9th. πŸ§ͺ

www.ualberta.ca/en/graduate-...

30.01.2026 18:35 πŸ‘ 8 πŸ” 7 πŸ’¬ 0 πŸ“Œ 0
This Research Experiences for Undergraduates (REU) program is funded by the National Science Foundation to create "points of entry" for students interested in research. Students apply from across the country to spend 10 weeks in Bozeman, Montana this summer (May 26, 2026 - August 1, 2026). Admitted students are paired with a faculty mentor, who serves as an advisor for a student's summer project. Each student receives a stipend ($7000 for 10 wks). Travel compensation, room, and board are also provided.

Our program leverages MSU’s unique microbiology expertise, focusing specifically on microbes living with little or no oxygen (like those in the hot springs of nearby Yellowstone). Low oxygen microbes are essential to human and ecosystem health. They influence (or control) such processes as the breakdown of food in the GI tract, removal of toxins from our bodies and the environment, and production of greenhouse gases. They are also models for understanding the origins of life on this planet, and the potential for life on other planets.

A key goal of our program is to recruit students from schools with limited research infrastructure. Being in Montana, a state with a vibrant Native American community, we are particularly interested in applications from students at tribal colleges. However, ANYONE with an interest in microbiology - or biology/science in general - can and should apply.

If willing and able, please share/tweet/spread the word far and wide. Applications are due February 14, 2026. Full details can be found through our website http://www.montana.edu/mbi/reu/

This Research Experiences for Undergraduates (REU) program is funded by the National Science Foundation to create "points of entry" for students interested in research. Students apply from across the country to spend 10 weeks in Bozeman, Montana this summer (May 26, 2026 - August 1, 2026). Admitted students are paired with a faculty mentor, who serves as an advisor for a student's summer project. Each student receives a stipend ($7000 for 10 wks). Travel compensation, room, and board are also provided. Our program leverages MSU’s unique microbiology expertise, focusing specifically on microbes living with little or no oxygen (like those in the hot springs of nearby Yellowstone). Low oxygen microbes are essential to human and ecosystem health. They influence (or control) such processes as the breakdown of food in the GI tract, removal of toxins from our bodies and the environment, and production of greenhouse gases. They are also models for understanding the origins of life on this planet, and the potential for life on other planets. A key goal of our program is to recruit students from schools with limited research infrastructure. Being in Montana, a state with a vibrant Native American community, we are particularly interested in applications from students at tribal colleges. However, ANYONE with an interest in microbiology - or biology/science in general - can and should apply. If willing and able, please share/tweet/spread the word far and wide. Applications are due February 14, 2026. Full details can be found through our website http://www.montana.edu/mbi/reu/

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Friends, please help spread the word about our microbiology REU program at Montana State University.
www.montana.edu/mbi/reu/

Each student receives a stipend ($7000 for 10 wks). Travel compensation, room, and board are also provided.

Details in the attached pic--Feb 14 deadline
🧫πŸ§ͺ🦠#microsky

28.01.2026 19:45 πŸ‘ 62 πŸ” 84 πŸ’¬ 3 πŸ“Œ 0
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Defending PhD student, looking over their thesis: β€œIf I knew then what I know now, I could’ve done all of this in like 9 months.”

A thread about my favorite pioneering cave explorers and why I don’t think AI will ever β€œsolve” biology.

11.01.2026 21:27 πŸ‘ 89 πŸ” 31 πŸ’¬ 3 πŸ“Œ 9
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I am beyond excited to announce that the Bisson Lab has a new home!!! Starting January 2026, I will join the Biology Department at Indiana University Bloomington as Associate Professor with tenure.

I am actively recruiting scientists across all levels. More in our website: bissonlab.com/join

[1/4]

24.12.2025 17:09 πŸ‘ 188 πŸ” 25 πŸ’¬ 20 πŸ“Œ 3
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Summer Undergraduate Research Experience | HHMI The Cech Fellows Program is a paid, nine-week summer research experience empowering the next generation of scientific leaders.

Calling all rising juniors & seniors: Interested in biological or biomedical research? Applications for our ’26 Summer Undergraduate Research Experience Program are now open! Nine weeks, hands-on research, & mentorship from some of the nation’s top scientists β€” learn more: bit.ly/CechFellows

18.11.2025 14:44 πŸ‘ 70 πŸ” 88 πŸ’¬ 0 πŸ“Œ 12

Such a cool project that will open a lot of doors to studying menstrual biology! Congrats @karalmckinley.bsky.social , @cagricevrim.bsky.social and all authors.

11.10.2025 00:43 πŸ‘ 5 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
Application – EMBL International PhD Programme

A reminder that the PhD program for EMBL is open for winter recruitment round. If you want to understand life at a molecular level and have a quantitative science (you don't have to have done biology - we love our mathematicians/physcists/chemists!) apply www.embl.org/about/info/e...

09.10.2025 04:51 πŸ‘ 34 πŸ” 44 πŸ’¬ 1 πŸ“Œ 0
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio

We're hiring! Check out our ad and please re-post or forward to interested #Microbiology parties: apply.interfolio.com/174783

07.10.2025 16:10 πŸ‘ 19 πŸ” 30 πŸ’¬ 0 πŸ“Œ 3
Black in Micro Week 2025 Early Career Research Symposium held on October 15, 2025, from 9 AM to 12 PM EST. Presenters include Katelyn Nicole Ward, Larisa Chila Kiki, Mallory Evans, Savannah Nicole Lewis, EnycΓ© Fairbanks, and Khadijat Oluwapelumi Adefaye. It features six research presentations by early career scientists from various universities, covering topics such as drug repositioning for fungal infections, bacteriophage adaptation to silver ions, inflammasome responses to LPS, NK cell dynamics in malaria, organoid modeling of bacterial toxins, and protein disorder in Hepatitis E virus.

Black in Micro Week 2025 Early Career Research Symposium held on October 15, 2025, from 9 AM to 12 PM EST. Presenters include Katelyn Nicole Ward, Larisa Chila Kiki, Mallory Evans, Savannah Nicole Lewis, EnycΓ© Fairbanks, and Khadijat Oluwapelumi Adefaye. It features six research presentations by early career scientists from various universities, covering topics such as drug repositioning for fungal infections, bacteriophage adaptation to silver ions, inflammasome responses to LPS, NK cell dynamics in malaria, organoid modeling of bacterial toxins, and protein disorder in Hepatitis E virus.

Early Career Research Symposium featuring Aureliana Filomena Chambal Chilengue, Hassan Abbas, Nazik Elmekki, Immaculata Chika Ede, Audrey Randall, and Justin Durunyamunwu. Topics include tuberculosis transmission analysis using reference-free clustering, gut microbiota comparisons in ulcerative colitis, fitness determinants of Phocaeicola vulgatus, wound biofilm modeling, the role of Parabacteroides distasonis in type I diabetes, and microvascular modeling in dengue virus research.

Early Career Research Symposium featuring Aureliana Filomena Chambal Chilengue, Hassan Abbas, Nazik Elmekki, Immaculata Chika Ede, Audrey Randall, and Justin Durunyamunwu. Topics include tuberculosis transmission analysis using reference-free clustering, gut microbiota comparisons in ulcerative colitis, fitness determinants of Phocaeicola vulgatus, wound biofilm modeling, the role of Parabacteroides distasonis in type I diabetes, and microvascular modeling in dengue virus research.

Early Career Research Symposium showcasing presenters howcasing presenters Nadia Holness, Deus Kamya, Trinity Moore, Caitlin Wiafe-Kwakye, Drea Darby, and Teni Shosanya. Topics include the role of Staphylococcus aureus in skin inflammation, the impact of Candida albicans on oral epithelial cells, the role of Bacteroides thetaiotaomicron in gut inflammation, the effect of Enterococcus faecalis on colorectal cancer, the influence of Streptococcus pneumoniae on lung immunity, and the use of Escherichia coli in synthetic biology applications.

Early Career Research Symposium showcasing presenters howcasing presenters Nadia Holness, Deus Kamya, Trinity Moore, Caitlin Wiafe-Kwakye, Drea Darby, and Teni Shosanya. Topics include the role of Staphylococcus aureus in skin inflammation, the impact of Candida albicans on oral epithelial cells, the role of Bacteroides thetaiotaomicron in gut inflammation, the effect of Enterococcus faecalis on colorectal cancer, the influence of Streptococcus pneumoniae on lung immunity, and the use of Escherichia coli in synthetic biology applications.

Early Career Research Symposium with additional presenters. Presenters include Katelyn Nicole Ward, Larisa Chila Kiki, Mallory Evans, Savannah Nicole Lewis, EnycΓ© Fairbanks, and Khadijat Oluwapelumi Adefaye. It features six research presentations by early career scientists from various universities, covering topics such as drug repositioning for fungal infections, bacteriophage adaptation to silver ions, inflammasome responses to LPS, NK cell dynamics in malaria, organoid modeling of bacterial toxins, and protein disorder in Hepatitis E virus.

Early Career Research Symposium with additional presenters. Presenters include Katelyn Nicole Ward, Larisa Chila Kiki, Mallory Evans, Savannah Nicole Lewis, EnycΓ© Fairbanks, and Khadijat Oluwapelumi Adefaye. It features six research presentations by early career scientists from various universities, covering topics such as drug repositioning for fungal infections, bacteriophage adaptation to silver ions, inflammasome responses to LPS, NK cell dynamics in malaria, organoid modeling of bacterial toxins, and protein disorder in Hepatitis E virus.

🌟 Join us for the #BlackInMicro Research Symposium on October 15, 2025. We are excited to feature 25 early career speakers! Don't miss out - sign up here: linktr.ee/BlackInMicro or click the link in our bio!

02.10.2025 19:09 πŸ‘ 4 πŸ” 9 πŸ’¬ 1 πŸ“Œ 0

For last 10 years - we have worked with thousands of organizations around the world helping support them in integrating foldscope programs.

To bring in a new cohort of organizations - we are re-launching β€œfast and curious” 2025 edition - apply and get a Foldscope trainer and Foldscopes for free!

22.09.2025 02:19 πŸ‘ 59 πŸ” 30 πŸ’¬ 0 πŸ“Œ 1

Any academic folks on H1B visas (even with stamps in passports) please get legal advice from your University attorneys before leaving the US.

20.09.2025 04:09 πŸ‘ 285 πŸ” 135 πŸ’¬ 8 πŸ“Œ 4

hey bluesky πŸ‘‹ visa hurdles mean I’m looking for opportunities outside the US. I’m a computational biologist (bacterial + phage genomics, postdoc in Koonin’s group @ NIH). I am interested in teaming up on funding apps. reach out if this resonates!

15.09.2025 17:26 πŸ‘ 69 πŸ” 89 πŸ’¬ 1 πŸ“Œ 3

We are looking for a postdoc to study single-cell transcriptional heterogeneity in the human skin microbiome.

We have a new protocol mostly developed, but need someone to see it through. Experience with protocol dev or RNAseq appreciated.

Funded by a new grant from MIT-HEALS.

12.09.2025 16:49 πŸ‘ 79 πŸ” 61 πŸ’¬ 0 πŸ“Œ 0
01.09.2025 11:18 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Job opportunity Postdoctoral Researcher (m/f/div) in Gut Microbiome Host Interactions at Leibniz HKI Jobportal Wissenschaft/Forschung in Jena

We’re hiring a Postdoc on Gut Microbiome–Host Interactions @leibniz-hki.de, Jena πŸ‡©πŸ‡ͺ

You'll create organ-on-chip models to study how microbes mediate host responses to xenobiotics

jobs.hki-jena.de/jobs/Postdoc...

12.08.2025 08:53 πŸ‘ 9 πŸ” 15 πŸ’¬ 0 πŸ“Œ 1
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Metagenomic estimation of absolute bacterial biomass in the mammalian gut through host-derived read normalization | mSystems In this study, we asked whether normalization by host reads alone was sufficient to estimate absolute bacterial biomass directly from stool metagenomic data, without the need for synthetic spike-ins, ...

You can get an accurate estimate of total bacterial biomass from stool metagenomes by simply normalizing by host read count, without needing any additional measurements.

Excellent work by UW Master's student Gechlang Tang in @asm.org #mSystems Journal.

journals.asm.org/doi/10.1128/...
🧡

31.07.2025 15:33 πŸ‘ 94 πŸ” 50 πŸ’¬ 7 πŸ“Œ 4
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πŸ“’ Open Call! The Max Perutz Labs invite applications for a Tenure-Track Professorship in Mechanistic Cell and Developmental Biology. More details ➑️ tinyurl.com/3fbkp89c

23.07.2025 13:14 πŸ‘ 37 πŸ” 44 πŸ’¬ 1 πŸ“Œ 3
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Abstract deadline for short talks is Sep 23, but abstracts for posters will be accepted until Dec 30.

17.07.2025 18:36 πŸ‘ 4 πŸ” 2 πŸ’¬ 0 πŸ“Œ 1
Special Postdoctoral Positions for displaced scientists (2025) The Kavli Institute for the Physics and Mathematics of the Universe (Kavli IPMU), WPI at the University of Tokyo solicits applications for its special Postdoctoral Fellowship program.

At Kavli IPMU, we have openings for postdocs who were displaced from their previous jobs for whatever reason.

Please consider if this is applicable! IPMU is an international research institute working on astro, math and physics, with English as the working language.

www.ipmu.jp/en/job-oppor...

26.06.2025 00:41 πŸ‘ 33 πŸ” 28 πŸ’¬ 0 πŸ“Œ 3
Session EEB-IDS-501 - Evolution in Microbiomes Across Environments
Adaptive Evolution of Bacteroides fragilis under Oxidative Stress Modulates Iron Metabolism and Intensifies Host Inflammatory Responses
Add to Itinerary
June 23, 2025, 9:15 AM - 9:30 AM 	402AB, LACC

Session EEB-IDS-501 - Evolution in Microbiomes Across Environments Adaptive Evolution of Bacteroides fragilis under Oxidative Stress Modulates Iron Metabolism and Intensifies Host Inflammatory Responses Add to Itinerary June 23, 2025, 9:15 AM - 9:30 AM 402AB, LACC

If you're at #ASMicrobe, check out @reneeoles.bsky.social's talk on Monday morning:

Session EEB-IDS-501 - Evolution in Microbiomes Across Environments

Adaptive Evolution of Bacteroides fragilis under Oxidative Stress Modulates Iron Metabolism and Intensifies Host Inflammatory Responses

#asm2025

20.06.2025 22:57 πŸ‘ 19 πŸ” 8 πŸ’¬ 1 πŸ“Œ 0
BMA invites abstract submissions from early career researchers for the Early Career Research Symposium on Career & Research Day! Including undergraduates, all the way up to junior faculty/managers across academic, industry and government sectors. Submit your abstract today at tinyurl.com/BIM-abstract25. Abstracts due July 8, 11.59PM EST. This will be a virtual symposium.

BMA invites abstract submissions from early career researchers for the Early Career Research Symposium on Career & Research Day! Including undergraduates, all the way up to junior faculty/managers across academic, industry and government sectors. Submit your abstract today at tinyurl.com/BIM-abstract25. Abstracts due July 8, 11.59PM EST. This will be a virtual symposium.

Hands up #BlackInMicro Early Career Researchers!! πŸ™ŒπŸΎπŸ‘©πŸ½β€πŸ”¬πŸ‘¨πŸΎβ€πŸ’»πŸ§‘πŸΎβ€πŸ”¬ We are now accepting abstracts for the ECR Symposium on Wed. October 15, on Careers & Research Day. Submit your abstract at tinyurl.com/BIM-abst... by July 8, 11.59PM EST! #BiM2025 #BlackInMicrobiology #EarlyCareerResearch

10.06.2025 13:32 πŸ‘ 20 πŸ” 18 πŸ’¬ 1 πŸ“Œ 0
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a man says please tell us what you know in a netflix advertisement ALT: a man says please tell us what you know in a netflix advertisement

Did the Tr*mp administration cancel your NIH or NCI grant proposal? Know someone who was affected? The Committee on Science, Space, and Technology in the House wants to hear from you. Please fill out this link and share. forms.office.com/pages/respon...

#CancerResearch #OncoSky #CanSky

05.06.2025 01:15 πŸ‘ 79 πŸ” 76 πŸ’¬ 1 πŸ“Œ 3
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Postdoctoral Associate in IBD genetics in C. elegans and organoids Post a job in 3min, or find thousands of job offers like this one at jobRxiv!

Opening for a #postdoc in the lab available immediately. Please spread the word.

DETAILS HERE: jobrxiv.org/job/baylor-c...

cc: #academicJobs #postdocJobs #microbiome #Celegans #organoids #IBD #PathSky #Medsky #AcademicSky πŸ§ͺ 🧬 🦠

31.05.2025 16:28 πŸ‘ 13 πŸ” 27 πŸ’¬ 0 πŸ“Œ 5
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I'm looking for a postdoc in computational evolutionary phage genomics, with the goal to better understand how protein innovation arises in viruses, at @jagiellonskiuni.bsky.social in Krakow (Poland).

Drop me a line if it sounds cool!

Deadline: 20.06.

Link here:
mcb.uj.edu.pl/documents/15...

20.05.2025 07:52 πŸ‘ 23 πŸ” 24 πŸ’¬ 2 πŸ“Œ 0
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πŸ“£ Junior PI Opportunity
Join CNRS Strasbourg to lead cutting-edge research on host-pathogen interactions in insects πŸͺ°
450k€ package | Drosophila, RNA, immunity
IBMC + Labex NetRNA network
πŸ“… Apply by June 30, 2025
πŸ”— ibmc.cnrs.fr/en/laboratoi...
#RNA #Insects #Drosophila #NetRNA #Immunity #JobAlert

15.05.2025 08:16 πŸ‘ 13 πŸ” 24 πŸ’¬ 1 πŸ“Œ 0
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Postdoctoral studies in single-cell and spatial proteotranscriptomics and computational biology (scholarship) Do you want to contribute to top quality medical research?Β  A postdoctoral position to study the proteotranscriptomic landscape of intestinal tissue regeneration, with clear implications for intestin

A postdoctoral position in computational biology is open in our lab!

"Molecular and cellular circuits in the gastrointestinal tract
using spatial multi-omics approaches"

Apply here πŸ‘‡

ki.varbi.com/what:job/job...

14.05.2025 14:43 πŸ‘ 1 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
A screenshot of the termination notice showing "Outstanding Investigator Grants"

A screenshot of the termination notice showing "Outstanding Investigator Grants"

A screenshot of the termination notice with "This award is terminated effective the date of this award, due to unsafe antisemitic actions that suggest the institution lacks concern for the safety and wellbeing of Jewish students." highlighted

A screenshot of the termination notice with "This award is terminated effective the date of this award, due to unsafe antisemitic actions that suggest the institution lacks concern for the safety and wellbeing of Jewish students." highlighted

Yesterday, the NIH R35 β€œOutstanding Investigator” grant to fund scientists in my lab studying antibiotic resistance was terminated for reasons not related to the content of the science, or any actions taken by me or members of my lab

13.05.2025 23:37 πŸ‘ 879 πŸ” 579 πŸ’¬ 144 πŸ“Œ 73
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Did You Work on a Terminated NIH Grant? ProPublica Wants to Hear From You. The National Institutes of Health is canceling grants that are seen as conflicting with the Trump administration’s priorities. We want to hear from researchers who have been affected.

We are continuing to look into grant terminations at the NIH, and we want to hear from you.

Please reach out to us with your experiences: www.propublica.org/getinvolved/...

07.05.2025 22:18 πŸ‘ 115 πŸ” 53 πŸ’¬ 2 πŸ“Œ 0
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Hey y'all! My department is conducting a search for an assistant or associate professor in bacteriology. It's pretty broadly defined. If you know anyone who's looking for a great department that does awesome science - please send them our way! You can DM me with any questions you have πŸ˜€

09.05.2025 19:22 πŸ‘ 57 πŸ” 77 πŸ’¬ 3 πŸ“Œ 5
A graphic for the Marie SkΕ‚odowska-Curie Actions (MSCA), showing a historical portrait of Marie SkΕ‚odowska-Curie overlaid with an image of four young researchers walking down a hallway. The European Commission logo is in the top left. Text reads: "Marie SkΕ‚odowska-Curie Actions – €404.3 million to support postdoctoral researchers”

A graphic for the Marie SkΕ‚odowska-Curie Actions (MSCA), showing a historical portrait of Marie SkΕ‚odowska-Curie overlaid with an image of four young researchers walking down a hallway. The European Commission logo is in the top left. Text reads: "Marie SkΕ‚odowska-Curie Actions – €404.3 million to support postdoctoral researchers”

Choose Science. Choose Europe.

A new Marie SkΕ‚odowska-Curie Actions Postdoctoral Fellowships 2025 call is now open.

With a budget of €404.3 million, it will support around 1,650 researchers from Europe and beyond.

Apply by 10 September β†’ europa.eu/!fBTMgF

08.05.2025 10:12 πŸ‘ 954 πŸ” 560 πŸ’¬ 15 πŸ“Œ 99