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Pathogen Dynamics Unit

@pducambridge

Infectious Disease Research Unit at the University of Cambridge working on the emergence, spread, and control of pathogens. See more at: www.pdu.gen.cam.ac.uk Member starter pack: https://go.bsky.app/7PFMyLu

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22.02.2024
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Latest posts by Pathogen Dynamics Unit @pducambridge

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The role of microbial genomics in delivering the UK’s national action plan for confronting antimicrobial resistance 2024–29 Antimicrobial resistance (AMR) is a major threat to human and animal health, in addition to environmental resilience. Countries set the agenda on thei…

Are you interested in how your genomics work can meaningfully feed into addressing the UK National Action Plan on AMR? 🧬🧫 🦠💊 Then check out our handy personal view out today in Lancet Microbe … 🧵1/n
www.sciencedirect.com/science/arti...

04.03.2026 14:51 👍 21 🔁 12 💬 1 📌 0
Preview
Call for abstracts - EMBO Workshop Shigella: from biology to prevention EMBO Workshop Shigella: from biology to prevention

Call for #poster #abstracts is open for the #Shigella meeting @shigellameeting.bsky.social thru Feb! Secure your spot by #registering! #ShowUsYourScience
#MicroSky #IDSky 🦠 🧫🔬

www.shigella2026.conferences-pasteur.org/call-for-abs...

03.02.2026 17:03 👍 1 🔁 5 💬 0 📌 0

We are looking for a new lab administrator (0.5 FTE) - come and join in pushing forward our research and impact in infectious disease! www.cam.ac.uk/jobs/researc...

15.01.2026 10:03 👍 1 🔁 3 💬 0 📌 0
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Come and join us in Paris 2026 to talk all about Shigella!

18.09.2025 12:46 👍 11 🔁 12 💬 0 📌 3

📢 Thrilled to see that our work on chikungunya virus (CHIKV) epidemiology in Brazil is out in @thelancetinfdis.bsky.social 🧵

01.12.2025 07:42 👍 11 🔁 6 💬 1 📌 0

Out this week from @virologyhouldcroft.bsky.social and colleagues 👀

08.08.2025 14:35 👍 1 🔁 0 💬 0 📌 0

I hope all my fellow #shigellaphiles have 20 - 24 April 2026 blocked out in their diaries for @shigellameeting.bsky.social next year in Paris! In the meantime, check out (and join) our starter pack to start community building now 🧫

07.08.2025 16:49 👍 4 🔁 6 💬 0 📌 0

This one has been a long time coming: we delivered this through institutional changes and the team incubated two babies 👶 👶 alongside this phenomenal work dissecting the genomic epidemiology of a globally important Salmonella serovar causing iNTS disease worldwide! 🧬 🧫 💊

27.07.2025 08:52 👍 0 🔁 1 💬 0 📌 0
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This week, @emiliefinch.bsky.social and @jandraor.bsky.social from our team delivered a hands-on workshop on infectious disease modelling.
Participants from KAUST were introduced to the fundamentals of transmission dynamics.

Huge thanks to all the participants for their curiosity and engagement.

26.07.2025 21:30 👍 5 🔁 1 💬 0 📌 1

@ksbakes.bsky.social is representing PDU at the GRC Microbial Population Biology conference this week introducing the AMR through time and space session - check out the work of the other attendees here:

06.07.2025 21:41 👍 6 🔁 2 💬 0 📌 0

Smashing time at the @pducambridge.bsky.social retreat this week!

04.07.2025 15:18 👍 3 🔁 1 💬 0 📌 0
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Ipswich looking glorious in the sun. Brilliant 48h with the @pducambridge.bsky.social solving the pressing questions in infectious diseases, competing in penalty shoot outs and cooking up a storm #PDURetreat

04.07.2025 08:36 👍 6 🔁 5 💬 0 📌 1

Final one before the weekend ... check out this amazing new preprint from @charlotteechong.bsky.social where she uncovers what the dominant forces are shaping accessory genome dynamics in the WHO AMR priority pathogen Pseudomonas aeruginosa 🧫 🛡️💊

23.05.2025 18:44 👍 2 🔁 1 💬 0 📌 0

Check out the latest from the lab on Sexually Transmissible shigellosis where @lewiscemason.bsky.social and co unpick why this relatively obscure disease re-emerged endemically in the 21st Century 🔬 🧫 🕵️ 🧬

23.05.2025 12:59 👍 7 🔁 4 💬 0 📌 0
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It's the 3rd week of Women’s History Month and we want to introduce you to Dr Angkana Huang [Hat], Postdoctoral Research Fellow @pducambridge.bsky.social

Read about her research project and how she is involved in making science more equitable in the Global South ⬇️
www.gen.cam.ac.uk/womens-histo...

17.03.2025 10:25 👍 5 🔁 3 💬 0 📌 1

Check out this amazing new NextFlow GWAS pipeline (based on pyseer) by our very own @rositea.bsky.social, a first year PhD student in the PDU!

06.03.2025 13:40 👍 1 🔁 2 💬 0 📌 0

A way to use cross sectional serological data to reconstruct the changing circulation patterns of pathogens. All in an R package.

14.02.2025 16:27 👍 2 🔁 1 💬 0 📌 0

Great way to start the year! A paper in @nature.com by our amazing @noemie presenting a way to use sequences to identify pathogen lineages, quantify their fitness, and identify potentially important genes/snps . Works across bugs, even with minimally and biased set of sequences.

02.01.2025 09:48 👍 14 🔁 7 💬 0 📌 0

Great way to finish the year! Paper by our @huangat.bsky.social in @pnas.org showing that relying on seroconversions in cohorts will usually lead to horribly biased #dengue incidence estimates whereas models relying on age data from local hospital typically robust.

01.01.2025 09:11 👍 9 🔁 5 💬 1 📌 0
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Certain sublineages of antimicrobial resistant bacteria dominate the surveillance landscape, but what causes them to become resistant? Check out our latest work in Shigella to find out and/or read the thread below www.medrxiv.org/content/10.1101/2024.10.27.24316207v2
1/n

19.12.2024 20:48 👍 63 🔁 37 💬 4 📌 5

Very excited to present our latest work as my first post on Bluesky. Thanks to all co-authors for their valuable contributions! A truly mammoth effort with many different fields of expertise coming together. Looking forward to working with all of you in future as well. #Microsky

20.12.2024 12:13 👍 9 🔁 3 💬 0 📌 0
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Really enjoying having @atjcagan.bsky.social in the @geneticscam.bsky.social who drew this fab piece at our recent research day. Contains some exciting teasers for our next awesome piece of work landing before Christmas! Thanks Alex!

07.12.2024 12:35 👍 10 🔁 3 💬 0 📌 1
PDU | PDU

Apologies for the website glitch - it's www.pdu.gen.cam.ac.uk

20.12.2024 16:32 👍 0 🔁 3 💬 0 📌 0

Really excited to launch the new iteration of the Bakery as part of the Pathogen Dynamics Unit, co-led with @hsalje.bsky.social and @virologyhouldcroft.bsky.social Has been awesome working together this last year and really excited for things to come! Please follow and repost.

20.12.2024 12:33 👍 13 🔁 5 💬 1 📌 0

Hello world! After a year in the making, the Pathogen Dynamics Unit is ready to launch! Check out our website (pdu.gen.cam.ac.uk) and follow the team (bsky.app/profile/did:...) to keep up with the latest from our infectious disease supergroup based at @geneticscam.bsky.social

20.12.2024 12:28 👍 22 🔁 12 💬 1 📌 2