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Stephen Gordon

@steve-myco

Professor of Infection Biology, University College Dublin ๐Ÿ‡ฎ๐Ÿ‡ช Views my own

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Latest posts by Stephen Gordon @steve-myco

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Acidic pH Restricts Nonโ€Tuberculous Mycobacteria Replication Different nontuberculous mycobacteria (NTM) species display unique replication profiles in acidic pH inย vitro which correlates to their replication within human macrophages. Inhibition of the acidic ...

Very happy to see this out! Great work by @lockwop.bsky.social @crick.ac.uk and first paper on NTMs from the lab! Parise made a set of 12 fluorescently labelled NTMs covering environmental and opportunistic mycobacteria...
onlinelibrary.wiley.com/doi/10.1111/...

12.03.2026 07:56 ๐Ÿ‘ 40 ๐Ÿ” 14 ๐Ÿ’ฌ 2 ๐Ÿ“Œ 1
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Iโ€™m pleased ๐Ÿค— to share our new preprint exploring the mode of action and resistance of the antitubercular drug pyrazinamide (PZA) ๐Ÿ’Š Thanks to everyone who have participated ๐Ÿ™Œ
We hope these findings will help the fight against drug resistance in tuberculosis.
www.biorxiv.org/content/10.6...

11.03.2026 15:24 ๐Ÿ‘ 27 ๐Ÿ” 19 ๐Ÿ’ฌ 3 ๐Ÿ“Œ 0
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#OnThisDay in 1938, American evolutionary biologist Lynn Margulis was born. Margulis is most known for developing and popularising the endosymbiotic theory, which explains how eukaryotic cells evolved organelles from simpler prokaryotic organisms that resided within another and became incorporated.

05.03.2026 18:02 ๐Ÿ‘ 63 ๐Ÿ” 24 ๐Ÿ’ฌ 2 ๐Ÿ“Œ 4
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The #BirdOfTheDay theme today is #SideView

The elusive jay.

#photography #photographic #photographers #Birds #Wildlife #Ireland
#blueskybirds
#birdsofbluesky #nature
#EastCoastKin

03.03.2026 08:01 ๐Ÿ‘ 39 ๐Ÿ” 2 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
Antimicrobial Resistance and the Right to a Healthy Environment: Crown Jewel or Damp Squib? | Public Humanities | Cambridge Core Antimicrobial Resistance and the Right to a Healthy Environment: Crown Jewel or Damp Squib? - Volume 2

The human right to a healthy, clean & sustainable environment could be a game changer for tackling #AMR's environmental drivers. But how could this work? Wendy Boucrot, Sheila Varadan & I review how the new right could be applied to #antimicrobial pollution.

doi.org/10.1017/pub....

#STS #HistMed

03.03.2026 08:58 ๐Ÿ‘ 3 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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I'll swim the seas inside with you
And like the waves, without a sound
I'll never let you down

#Ireland #Mayo #WildAtlanticWay
#photography #photographie #photographers
#EastCoastKin

26.02.2026 18:37 ๐Ÿ‘ 21 ๐Ÿ” 1 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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On #RareDiseaseDay, we recognise the leadership of Dr Cormac McCarthy, whose voice continues to raise research impact & awareness of Lymphangioleiomyomatosis (LAM). . #clinicaltrials

Patient partnership drives progress.

@ucdmedicine.bsky.social @ucddublin.bsky.social

27.02.2026 10:07 ๐Ÿ‘ 5 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 1
Unrooted phylogeny indicating the major clades of Mycobacterium bovis found in Ireland.

Unrooted phylogeny indicating the major clades of Mycobacterium bovis found in Ireland.

The genomic diversity and spatial patterns of Mycobacterium bovis in Ireland revealed by whole genome sequencing rdcu.be/e50zT

27.02.2026 10:42 ๐Ÿ‘ 8 ๐Ÿ” 3 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
First confirmation of Mycobacterium tuberculosis complex from medieval Ireland by aDNA analysis โ€“ palaeopathological and microbial findings Eight burials from the multi-period rural settlement site of Ranelagh near Roscommon town, Ireland, with palaeopathological lesions suggestive of skelโ€ฆ

Recovering Mycobacterium tuberculosis ๐Ÿฆ  from ancient samples is notoriously difficult. But, in this new study, the elusive M. tuberculosis DNA was detected in five individuals from medieval Ireland.
doi.org/10.1016/j.tu...
#MetagenomicsMonday #SPAAM #aDNA #paleogenomics #tuberculosis #TB #pathogen

09.02.2026 08:01 ๐Ÿ‘ 5 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Can safely way this is the craziest and coolest study I have led. We chart the evolution of sheeppox virus, finding it in the Eurasian steppe ~3700 years ago, and also in a LOT of parchment from medieval Europe (made from a range of animals skins!) #aDNA

25.02.2026 07:45 ๐Ÿ‘ 55 ๐Ÿ” 23 ๐Ÿ’ฌ 5 ๐Ÿ“Œ 1
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Bacterial defense systems and host ecology drive the evolution of intra-species lineages Staphylococcus aureus lineages vary widely in the frequency of gene exchange and the diversity of genome content. Gorzynski and Harling-Lee et al. show that both host ecology and the horizontal acquis...

Great work by Jamie Gorzynski and Josh-Harling-Lee from the group providing insights into the evolutionary origins of bacterial lineages. A collaboration with @jrpenades.bsky.social @wfigueroac3.bsky.social. #Staph Cell Reports www.cell.com/cell-reports...

18.02.2026 09:31 ๐Ÿ‘ 26 ๐Ÿ” 13 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
PNAS Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...

Beautiful and solid work on trehalose monomycolate synthesis in mycobacteria by @figlegend.bsky.social lab. Check it out folks. Also, for the non-enzymologists, product inhibition is a thing, and actually does matter. ๐Ÿ˜œ

www.pnas.org/doi/10.1073/...

24.02.2026 17:53 ๐Ÿ‘ 15 ๐Ÿ” 5 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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Myeloid core of TB granulomas is partitioned into two distinct metabolic environments, one of which is hypoxic & associated with pathological immune cell states that subvert immunity to TB @natimmunol.nature.com @erin-mccaffrey.bsky.social
www.nature.com/articles/s41...

23.02.2026 23:06 ๐Ÿ‘ 13 ๐Ÿ” 5 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0

Good god Ireland are great

21.02.2026 15:06 ๐Ÿ‘ 1 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Bacterial metabolic remodeling by convergent evolution unlocks nutrient availability after a host switch Staphylococcus aureus has undergone metabolic remodeling to adapt to the dairy niche.

Insights into how #Staph aureus adapts to the bovine host by unlocking nutrients from the dairy niche. Great work by Amy Pickering, Jamie Gorzynski and others in the group. Bacterial metabolic remodeling by convergent evolution after a host switch.|Science Advances www.science.org/doi/10.1126/...

18.02.2026 09:40 ๐Ÿ‘ 29 ๐Ÿ” 15 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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In the largest study of its kind, scientists in the Bork Group at EMBL have found that a small subset of microbes can carry and transfer genes across disparate habitats, creating a planet-wide, interconnected network of microbiomes ๐ŸŒ ๐Ÿฆ 

๐Ÿ”— Read more here: www.embl.org/news/science...

09.02.2026 16:42 ๐Ÿ‘ 34 ๐Ÿ” 14 ๐Ÿ’ฌ 2 ๐Ÿ“Œ 4

Congrats to @aschwalbc.bsky.social for bringing this work to the finish line!

09.02.2026 19:16 ๐Ÿ‘ 4 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Mycobacterium tuberculosis overcomes phosphate starvation by extensively remodelling its lipidome with phosphorus-free lipids - Nature Communications Here, the authors show that Mycobacterium tuberculosis manipulates lipid metabolism to overcome host restriction, by remodelling its lipidome and utilising host lipids as an alternative phosphate sour...

Weโ€™re excited to share our latest study that reshapes our understanding of Mycobacterium tuberculosis (Mtb) lipid composition, with major implications for drug discovery, immunity, and vaccine development.

www.nature.com/articles/s41...

A thread.

22.12.2025 13:11 ๐Ÿ‘ 95 ๐Ÿ” 30 ๐Ÿ’ฌ 14 ๐Ÿ“Œ 3
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low winter sun

#EastCoastKin
#photography #photographie #photographers
#Ireland

18.12.2025 07:37 ๐Ÿ‘ 21 ๐Ÿ” 3 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Creation of new junior research groups at the Institut Pasteur - Call for applications 2026 - Research The Institut Pasteur is launching an international call to recruit new junior research group leaders leveraging cutting-edge transdisciplinary approaches to exploring infectious diseases, host-microbe...

๐Ÿ”ฌ Call to create junior research groups at the Institut Pasteur

Focus: Infectious diseases, host-microbe interactions, vaccines
Special interest: AI methodologies

๐Ÿ“… Deadline: Feb 9, 2026
๐Ÿ‘ฅ 2-12 years post-PhD

Apply now ๐Ÿ“ research.pasteur.fr/en/call/crea...

#JobOpportunity #Research

08.12.2025 08:53 ๐Ÿ‘ 99 ๐Ÿ” 136 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 9
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A new role for lipoproteins LpqZ and FecB in orchestrating mycobacterial cell envelope biogenesis | mBio Tuberculosis, caused by Mycobacterium tuberculosis (Mtb), remains the worldโ€™s deadliest bacterial infection, in part because the bacteriumโ€™s unique cell envelope makes it highly resistant to antibioti...

Of course I like all the papers that we publish, but this is actually a very cool story, a great example of 'bush mechanics' in mycobacteria.
A new role for lipoproteins LpqZ and FecB in orchestrating mycobacterial cell envelope biogenesis | mBio journals.asm.org/doi/10.1128/...

13.12.2025 08:28 ๐Ÿ‘ 14 ๐Ÿ” 6 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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High frequency body site translocation of nosocomial Pseudomonas aeruginosa - Nature Communications Here, the authors report within-host diversity and body site translocation dynamics in hospital samples of Pseudomonas aeruginosa and reveal that body site sharing was likely due to within-patient tra...

Really pleased to share the first paper to come out of the lab.
We found that hospital patients were frequently colonised with P. aeruginosa and that the same clone was shared between the gut and the lung.
The phylogenies indicate that the clones moved from lung->gut

www.nature.com/articles/s41...

25.11.2025 10:40 ๐Ÿ‘ 64 ๐Ÿ” 33 ๐Ÿ’ฌ 2 ๐Ÿ“Œ 4
A research agenda advancing climate change and antimicrobial resistance as interconnected issues - Nature Climate Change Interactions between climate change and antimicrobial resistance across terrestrial, aquatic and health systems reveal shared drivers, synergies and trade-offs that shape health and environmental outc...

What are the associations between #AMR ๐Ÿ’Š & #climatechange ๐ŸŒฆ๏ธ?

In Nature Climate Change, we evaluate existing evidence & define a challenge-oriented research agenda to uncover best equitable practice for synergistic governance responses:

doi.org/10.1038/s415...

@cermes3.bsky.social

24.11.2025 10:22 ๐Ÿ‘ 4 ๐Ÿ” 3 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Historicising the โ€œEmpty Pipelineโ€: How Antibiotic Innovation Became a Market Failure (1980โ€“2024) | Public Humanities | Cambridge Core Historicising the โ€œEmpty Pipelineโ€: How Antibiotic Innovation Became a Market Failure (1980โ€“2024) - Volume 1

On the last day of #WAAW ๐Ÿ”” ๐Ÿ’Š, some historians gave to me โ€ฆ

...a major review of the political-economic factors & concepts shaping #antimicrobial innovation since 1980 - and a call to diversify #antibiotic #R&D moving forward!

www.cambridge.org/core/journal...

For a summary, see the thread (1/9)

21.11.2025 14:37 ๐Ÿ‘ 5 ๐Ÿ” 4 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0

Congratulations Jay! Fantastic

30.10.2025 21:36 ๐Ÿ‘ 1 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Figure showing the immunopathogenesis of Shigella infection in the colon. MAMPs=microbe-associated molecular patterns. DAMPs=damage-associated molecular patterns. NK=natural killer. Adapted from Schnupf and Sansonetti. Copyright: 2025 Elsevier Ltd. All rights are reserved.

Figure showing the immunopathogenesis of Shigella infection in the colon. MAMPs=microbe-associated molecular patterns. DAMPs=damage-associated molecular patterns. NK=natural killer. Adapted from Schnupf and Sansonetti. Copyright: 2025 Elsevier Ltd. All rights are reserved.

Shigellosis is the most common cause of invasive bloody diarrhoea in children younger than 5 years.

The prevention of infection with vaccination & sanitation strategies remains a crucial step in reducing worldwide morbidity & mortality.

Find out more โ–ถ๏ธ tinyurl.com/ard69t83

06.10.2025 16:44 ๐Ÿ‘ 8 ๐Ÿ” 6 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0

Dear #microbiology and #immunology community- I took a break from social media after I deleted my Twitter account, but am back here. Please help me rebuild my community by following me and amplifying this message- I will follow you back. Thank you and I look forward to our many interactions!

05.10.2025 16:10 ๐Ÿ‘ 76 ๐Ÿ” 32 ๐Ÿ’ฌ 5 ๐Ÿ“Œ 2
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Harvest Time: The UCD Rosemount Orchard has rolled out a carpet of apples ๐ŸŽ

01.10.2025 16:25 ๐Ÿ‘ 4 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Inorganic sulfate is critical for Mycobacterium tuberculosis lung tissue colonization and redox balance | PNAS Tuberculosis remains the deadliest infectious disease caused by a single pathogen, highlighting the urgent need for novel therapies. A deeper under...

Excited to share Wendy Le Mouรซllicโ€™s PhD work, now published in @pnas.org!
It reveals that M. tuberculosis depends on inorganic sulfate import to survive inside host cellsโ€”fueling essential processes such as redox balance and stress resistance.
Huge congrats to Wendy & colleagues!
shorturl.at/WbFQC

23.09.2025 03:32 ๐Ÿ‘ 64 ๐Ÿ” 31 ๐Ÿ’ฌ 3 ๐Ÿ“Œ 1
Revisited model of PZA/HPOA efficacy, supporting a pH-dependent mechanism of weak acid permeation and cytosolic acidification as main mechanism of bactericidal activity. In this model, the authors propose that the presence of glycerol potentiates PZA/HPOA efficacy by generating acidic intermediates that lower IBpH. Accordingly, ฮฒ-alanine and pantothenate might mitigate this effect by acting as buffering molecules that alleviate acidosis. Finally, PanD enzymatic activity consumes protons which in turn increases IBpH. Therefore, in this model PanD minimally contributes to PZA tolerance and cannot be considered as the primary target of the drug.

Revisited model of PZA/HPOA efficacy, supporting a pH-dependent mechanism of weak acid permeation and cytosolic acidification as main mechanism of bactericidal activity. In this model, the authors propose that the presence of glycerol potentiates PZA/HPOA efficacy by generating acidic intermediates that lower IBpH. Accordingly, ฮฒ-alanine and pantothenate might mitigate this effect by acting as buffering molecules that alleviate acidosis. Finally, PanD enzymatic activity consumes protons which in turn increases IBpH. Therefore, in this model PanD minimally contributes to PZA tolerance and cannot be considered as the primary target of the drug.

New study shows pyrazinamide kills TB by acidifying bacterial cytosol โ€” not via PanD/CoA depletion. A long-standing debate settled, paving the way for smarter PZA-like drugs. #MicroSky

โœ๏ธ J. Laudouze, Y. Antonenko, @alexandregouzy.bsky.social, @pierresantucci.bsky.social & coll.
๐Ÿ“– shorturl.at/tuz6Q

29.09.2025 04:08 ๐Ÿ‘ 10 ๐Ÿ” 5 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 2