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Randy Read πŸ‡¨πŸ‡¦πŸ‡¬πŸ‡§'s Avatar

Randy Read πŸ‡¨πŸ‡¦πŸ‡¬πŸ‡§

@randyjread

Interested in likelihood-based methods for structural biology. Contributor to Phenix, CCP4 and CCP-EM. Based at CIMR, University of Cambridge. Posts usually about science.

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Latest posts by Randy Read πŸ‡¨πŸ‡¦πŸ‡¬πŸ‡§ @randyjread

It was a fantastic trip and a pleasure talking with the Pfizer team πŸ˜„ One highlight was discovering they’ve built a web GUI for ROCKET to make it more accessibleβ€”I’m thrilled (and even a bit surprised) to see how our tool helping people solve real-world problems.

13.03.2026 17:12 πŸ‘ 3 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
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New OpenFold3 preview out! (OF3p2)

It closes the gap to AlphaFold3 for most modalities.

Most critically, we're releasing everything, including training sets & configs, making OF3p2 the only current AF3-based model that is functionally trainable & reproducible from scratch🧡1/9

13.03.2026 15:00 πŸ‘ 193 πŸ” 71 πŸ’¬ 1 πŸ“Œ 2
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After an Amtrak coding session with @minhuanli.bsky.social, ROCKET team is back at @rs-station.bsky.social HQ! Thank you to Pfizer for welcoming us in Groton and to everyone who attended our seminar online. Exciting work ahead to continue exploring frontiers in structure determination. Back to it πŸš€

13.03.2026 12:16 πŸ‘ 6 πŸ” 1 πŸ’¬ 0 πŸ“Œ 1
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Take a look at our March issue: journals.iucr.org/d/issues/202...

On the cover: the response of two paradigmatic metalloproteins of different types, one iron-containing and one copper-containing, to X-ray-induced metal reduction at cryo- and room temperature journals.iucr.org/d/issues/202...

09.03.2026 14:57 πŸ‘ 3 πŸ” 2 πŸ’¬ 0 πŸ“Œ 0
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The @thecimr.bsky.social and MRC Mitochondrial Biology Unit are celebrating "Rare Research Day" TODAY!

By creating factsheets on how their work contributes to greater understanding and potential treatments.

#RareDiseaseDay #ShareYourColours #RareDiseaseDay2026 #UniversityofCambridge

27.02.2026 11:24 πŸ‘ 6 πŸ” 2 πŸ’¬ 0 πŸ“Œ 0

I find Airlie’s composite self rotation representation much easier to interpret. Check it out!

12.02.2026 16:57 πŸ‘ 2 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

At a time when the UK should be capitalising on its global reputation as a great place to do science, this is an enormous own goal. I am so sorry for all those who jobs are going to be impacted.

01.02.2026 14:07 πŸ‘ 37 πŸ” 28 πŸ’¬ 2 πŸ“Œ 0

Finally comms from UKRI - on a Sunday evening. No mention of the hundreds of ECRs who will see their careers ended by these decisions and notably no explanation for MRC retrospectively applying cuts and wasting all the work that went into writing, reviewing and scoring applications - Β£millions

01.02.2026 19:21 πŸ‘ 13 πŸ” 13 πŸ’¬ 1 πŸ“Œ 0

Missed it, thanks for pointing it out!

29.01.2026 07:16 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

My hero!!! An amazing scientist and a wonderful person!

28.01.2026 00:56 πŸ‘ 22 πŸ” 3 πŸ’¬ 1 πŸ“Œ 0

Has the MRC research funding β€˜pause’ been covered by any major news network?

It feels like it should be a major news story

28.01.2026 06:19 πŸ‘ 28 πŸ” 11 πŸ’¬ 8 πŸ“Œ 4
The Chi-Wang PhD Studentship at Jesus College and the University of Cambridge School of Clinical Medicine | Cambridge Institute for Medical Research The Chi-Wang Studentship at Jesus College and the University of Cambridge School of Clinical Medicine. Funding Application deadline: 23:59pm (midnight) UK time on 20th February 2026.

We have a fantastic opportunity for a PhD studentship in collaboration with @jesuscollegecam.bsky.social and Cambridge Children’s Research Institute, part of the new Cambridge Children’s Hospital. Closing date 20th Feb; all the details here: www.cimr.cam.ac.uk/postgraduate...

27.01.2026 09:18 πŸ‘ 1 πŸ” 3 πŸ’¬ 0 πŸ“Œ 1

She continues to be a lively presence at structural biology meetings. And for my money has the deepest, most intuitive understanding of protein geometry. A treasure.

26.01.2026 03:35 πŸ‘ 5 πŸ” 3 πŸ’¬ 0 πŸ“Œ 0

As someone who works directly with her in Phenix, I can tell you she is still one of the most focused and dedicated people I know!

26.01.2026 07:27 πŸ‘ 3 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

By the way, this is by the @alisiafadini.bsky.social behind ROCKET!

09.01.2026 17:23 πŸ‘ 5 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
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GitHub - rs-station/meteor: bringing you the best difference maps bringing you the best difference maps. Contribute to rs-station/meteor development by creating an account on GitHub.

New Title Alert: meteor- a tool for computing crystallographic difference maps that specializes in robust identification of weak signals from minor populations such as bound ligands or time-resolved experimental changes.

Learn more here: buff.ly/bgJYF9N

#SBGrid #SBGridSoftware #StructuralBiology

09.01.2026 17:03 πŸ‘ 4 πŸ” 5 πŸ’¬ 0 πŸ“Œ 1
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Mapping proteins, one side chain at a time Roland Dunbrack Jr. will receive the ASBMB DeLano Award for Computational Biosciences at the ASBMB Annual Meeting, March 7–10, just outside of Washington, D.C.

This appeared today: www.asbmb.org/asbmb-today/...

08.01.2026 02:25 πŸ‘ 34 πŸ” 6 πŸ’¬ 5 πŸ“Œ 0
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Now available: the Proceedings of the 2024 @ccpem.bsky.social em Spring Symposium, including a review of the first ten years of the Symposium: journals.iucr.org/special_issues/2025/CCPEM2024/

View all of the Proceedings at journals.iucr.org/d/services/ccpem

07.01.2026 14:34 πŸ‘ 6 πŸ” 5 πŸ’¬ 0 πŸ“Œ 1

Hope to see you there!

06.01.2026 22:22 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
Logos for IUCr2026 and Phenix

Logos for IUCr2026 and Phenix

#IUCr2026 Pre-Congress Workshop: Structure Solution with Phenix
Offers lectures and tutorials on using Phenix for automated macromolecular structure determination and validation from xtal and cryoEM data, integrating predicted models like AlphaFold
event.fourwaves.com/...

06.01.2026 22:11 πŸ‘ 5 πŸ” 3 πŸ’¬ 0 πŸ“Œ 1

There are a lot of ways to say in words how confident you are about something happening, so it’s good to see how consistent you are with yourself and others! (Turns out I’m not very consistent in how I rank near-synonyms.)

05.01.2026 14:30 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Our January issue is out: journals.iucr.org/d/issues/202...

The cover highlights a data survey of the PDB and CSD for macromolecular and ligand structures that have been determined at elevated temperatures. Read more at doi.org/10.1107/S205...

05.01.2026 14:04 πŸ‘ 2 πŸ” 3 πŸ’¬ 0 πŸ“Œ 0
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Check our new preprint smoothing rugged Cryo-EM landscapes: shorturl.at/gYs9U

We tackle practical hurdles of Optimal Transport (OT) lossβ€”differentiability, cost & noise sensitivityβ€”make it a feasible inference workhorse.
W/ G. Woollard, D. Herreros, @pilarcossio.bsky.social, K. Dao Duc πŸ§΅πŸ‘‡ (1/9)

02.01.2026 16:03 πŸ‘ 14 πŸ” 8 πŸ’¬ 1 πŸ“Œ 1

This is a classic of the genre!

30.12.2025 20:06 πŸ‘ 2 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
Original post on fediscience.org

RE: https://fediscience.org/@Guillawme/111534984107819771

Something really cool happened to me this year!

@HRBridges re-processed a #cryoEM dataset from some previous work of mine and colleagues (publicly available as EMPIAR-10739; see quoted post below for a summary of this work). She […]

28.12.2025 16:32 πŸ‘ 13 πŸ” 8 πŸ’¬ 3 πŸ“Œ 0

I got one even though I don’t have a current NIH grant. I’ve certainly been asked to update things before, though maybe not with this wording.

22.12.2025 15:03 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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PDBe: enhanced structural data exploration to facilitate discovery Abstract. Protein Data Bank in Europe (PDBe) is a founding member of the worldwide Protein Data Bank (wwPDB), delivering open access to experimentally dete

From Sameer Velankar & colleagues in @narjournal.bsky.social #NARDatabaseIssue | PDBe: enhanced structural data exploration to facilitate discovery | #Bioinformatics #Database #OpenScience #Proteomics #PDB 🧬 πŸ–₯️πŸ§ͺπŸ”“
⬇️
academic.oup.com/nar/advance-...

11.12.2025 15:13 πŸ‘ 7 πŸ” 3 πŸ’¬ 0 πŸ“Œ 0

Wow, that’s exciting! Looking forward to seeing what you get up to!

09.12.2025 16:24 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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Top UK scientist says research visa restrictions endanger economy Prof Sir Paul Nurse says the UK is "shooting itself in the foot" with its visa system for researchers.

BBC News - Top UK scientist says research visa restrictions endanger economy
www.bbc.com/news/article...

05.12.2025 06:35 πŸ‘ 33 πŸ” 22 πŸ’¬ 0 πŸ“Œ 2
IUCr 2026 Grants

IUCr 2026 Grants

Apply for #IUCr2026 travel grants
Funds are available to support students, early-career researchers, and participants from under-resourced institutions and/or developing countries.
Details at event.fourwaves.com/...

01.12.2025 17:55 πŸ‘ 2 πŸ” 3 πŸ’¬ 0 πŸ“Œ 0