Paulyna Magaña

Check out this thread for more information about the AFDV v6 release 👇🏽

Your direct links to structures have a new format.

Old: alphafold.com/entry/P40763
New: alphafold.com/entry/AF-P40...

Simply add 'AF-' and '-F1' to the UniProt ID. Update your bookmarks and code!

AlphaFold DB v6 is here! 🚀
Heads up on key updates:
🔹 Website now only serves v6
🔹 New URL format!!
🔹 Dual API active for 9 months (retirement: 25-06-2026)

Use the AlphaFold API for reliable access. Time to update those bookmarks & scripts!

Teamed up with Google Deepmind & @training.ebi.embl.org to launch the AlphaFold Education Summit!
We're helping researchers master AlphaFold & analyse macromolecular structures, driving impactful, responsible use of the system & database

15,319 new structures were added to the PDB archive in 2024! Most X-ray structures fell within the 1-2.5 Å range, with 49 structures exceeding 1 Å resolution! The best resolution? An astounding 0.70 Å for Crambin (PDBe.org/9ewk)

See you tonight at @harvardmed.bsky.social for an amazing seminar by Mireia to cap off 2024!

*Please note the change of location*

Was playing around with #AlphaFold Server and saw the example JSON for DNA sequence is "GATTACA". Either someone at Google DeepMind is a huge sci-fi nerd (like me!), or they're trying to tell us something about the future of genetic engineering... 🤔😜

Me: spends 3 hours making a presentation

Also me: spends 2 hours looking for the perfect font to use on the title slide 💀💀💀

Anyone else get ridiculously obsessed with tiny details that probably no one else even notices? Asking for a friend... 😅

Do you need a starting pack of researcher working on intrinsically disordered proteins?

Well, you might head over to @idpseminars.bsky.social and hit followers.

Tw***** was important for the birth of IDPseminars and for spreading the word. It would be cool to re-kindle that community here.

Microscopy image of human thymus

Introducing the first comprehensive spatial atlas of the developing human thymus.

Find out more and how our researchers helped to develop a new high resolution spatial mapping method to study the stages of thymus development.

🖥️🧬🧪

www.ebi.ac.uk/about/news/a...

The BFVD just leveled up!🔥 MSAs and conservation scores are now available alongside their massive collection of 351k+ viral protein structures! Great news @milot.bsky.social!! 🎉

Our Big Fantastic Virus Database (BFVD) is now published NAR! It contains protein structure predictions of major viral clades, enhanced by petabase-scale homology search and it's explorable on the web.
🌐 bfvd.foldseek.com
💾 bfvd.steineggerlab.workers.dev
📄 academic.oup.com/nar/advance-...

AlphaFold Database

Hey Bluesky folks! Make sure you're following pdbeurope.bsky.social for all the latest updates on the #AlphaFold Database!

wwPDB letters spelled-out with protein structures

As we head into 2024, let's take one final look back at 2023 and how the year unfolded in the PDB archive. There were 14488 entries released last year but what more can we find out about those structures ⚖️? A thread 1/10 🧵

Don't miss @sganguly.bsky.social & @glevans.bsky.social bringing the latest insights on wwPDB & PDBe to the CCP4 Summer Weekend! Join their Lunchtime Bytes session on Day 3 (Jan 5th). It's going to be a protein-packed lunch break! #CCP4SW 2024

Conference lobby with CCP4 conference advertised

CCP4 study weekend booklet

Excited to be attending 🔷 #CCP4SW 2024 / @ccp4_mx Study Weekend 🔷. In-person Lunchtime Bytes session on Day3 (Jan 5th) with PDBe. Look out for friendly PDBe representatives Sue (@sganguly) & Gen (@gleevans).