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Papalopulu Lab

@papalopululab

Interested in how changes in gene expression dynamics underlie cell state transitions in development and cancer. Our team is led by Prof Nancy Papalopulu and we are based at the University of Manchester.

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08.04.2025
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Latest posts by Papalopulu Lab @papalopululab

Join the Physics of Life ECR online seminar series from 2pm today to see our colleague Andrew Rowntree deliver a talk on computational strategies (informing experiments) to control protein oscillations via microfluidics! A collaborative project with @anzymiller.bsky.social

10.03.2026 10:46 πŸ‘ 1 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

This work was made possible through the exceptional efforts of our colleague and former PhD student Oliver Cottrell! Congratulations to all authors!

03.03.2026 16:11 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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HES1 oscillations are required for cell cycle reentry in oestrogen receptor–positive breast cancer cells | PNAS Long-term recurrence in breast cancer is driven by reactivation of dormant disseminated tumor cells (DTCs) and remains a major clinical challenge, ...

Dynamics, dynamics, dynamics! We asked how ER+ breast cancer cells transition from dormancy to reactivation. Inspired by developmental biology, we show that HES1 protein oscillations change during this shift β€” and that disrupting these dynamics prevents reactivation. www.pnas.org/doi/10.1073/...

03.03.2026 16:07 πŸ‘ 3 πŸ” 1 πŸ’¬ 1 πŸ“Œ 1

With the deadline fast approaching don't miss these opportunities to study at Manchester!

04.11.2025 11:05 πŸ‘ 1 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
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(MRC DTP) The impact of cell division on the decoding of oscillatory protein expression during spinal cord development and regeneration at The University of Manchester on FindAPhD.com PhD Project - (MRC DTP) The impact of cell division on the decoding of oscillatory protein expression during spinal cord development and regeneration at The University of Manchester, listed on FindAPh...

Looking for a PhD? Don't miss this opportunity to work with @anzymiller.bsky.social @lovegrovelab.bsky.social Karel Dorey and @veronicabiga.bsky.social. The deadline is Nov 8th!
www.findaphd.com/phds/project...

21.10.2025 08:20 πŸ‘ 0 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

Two exciting PhD opportunities at the University of Manchester! Apply before Nov 8th!

21.10.2025 08:15 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Catch up on Development presents… webinar on gene regulation - the Node Catch up on the Development presents... gene regulation webinar, featuring talks from two of Development's PI fellows.

ICYMI, the recordings of our #DevPres webinar on gene regulation are now available.
Check out the talks from @dev-journal.bsky.social PI fellows Anzy Miller @anzymiller.bsky.social and Marlies Oomen @marliesoomen.bsky.social.
thenode.biologists.com/catch-up-on-...
#devbio πŸŽ₯

12.09.2025 10:49 πŸ‘ 12 πŸ” 7 πŸ’¬ 0 πŸ“Œ 0

Check out the Perspective piece by our colleague @anzymiller.bsky.social and other fellows on the Pathway to Independence programme!

30.09.2025 16:26 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

This exciting study led by @anzymiller.bsky.social is now published! NGN3 oscillations control the timing of differentiation during pancreas development through a fold-change sensitive gene regulatory motif. Congratulations to all authors!

04.07.2025 16:00 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

A must read!

30.05.2025 10:38 πŸ‘ 0 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

Thank you Samuel!

30.05.2025 10:18 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Overall, our exploration of HES1 and HES5 in the same cell suggests that a co-expressing hybrid state is enabled by oscillatory dynamics and synchronisation at single cell level.

29.05.2025 16:00 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Using in vivo data, we show that the fraction of neural progenitor cells that co-express HES1 and HES5 becomes reduced between E9.5 and E10.5. This is supported by analysis of existing transcriptomics data showing that progenitors are exiting the hybrid state during development.

29.05.2025 15:59 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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In the coupled model, the resolution of the cross-repressive motif into a single dominant HES occurs through a change in cross-repression threshold and/or level; this suggests that a similar process could occur during development to give rise to separate HES1 and HES5 expression domains.

29.05.2025 15:57 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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Using a computational model of HES protein repressing mRNA, we find that differences in protein stability give them distinct free-running oscillatory periods, but co-expression results in phase-locking, with slower HES5 entraining faster HES1.

29.05.2025 15:55 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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Using in-vitro neural progenitor cultures and timelapse imaging, we show that most cells are in a hybrid HES1/HES5 state characterised by co-oscillation at a common 3-4h period. At the same time, a minority of progenitors show resolution of the hybrid state into one dominant HES.

29.05.2025 15:54 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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Oscillatory Co-expression of HES1 and HES5 Enables a Hybrid State in a Bistable Transcription Factor Regulatory Motif Many cell fate decisions in the developing neural tube are directed by cross-repressive transcription factor (TF) motifs that generate bistability, enforcing expression of one dominant TF. However, ev...

In our latest study by @veronicabiga.bsky.social, we explore how the β€œOscillatory Co-expression of HES1 and HES5 Enables a Hybrid State in a Bistable Transcription Factor Regulatory Motif”:
www.biorxiv.org/content/10.1...

29.05.2025 15:52 πŸ‘ 3 πŸ” 0 πŸ’¬ 1 πŸ“Œ 2
PI programme | Development | The Company of Biologists PI programme | Development | The Company of Biologists Development's Pathway to Independence programme Development is excited to announce our call for our Pathway to Independence program...

We're very excited to announce that our colleague @anzymiller.bsky.social is about to begin her @dev-journal.bsky.social Pathway to Independence journey! This will provide mentoring and support to emerging researchers in developmental biology and stem cells . journals.biologists.com/dev/pages/pi...

07.05.2025 09:33 πŸ‘ 3 πŸ” 1 πŸ’¬ 0 πŸ“Œ 1
The Company of Biologists 100 logo to the left and QR code to the right.
 
Portrait of John Gurdon to the left, text to the right
 
100 extraordinary biologists

John Gurdon

John Gurdon was Chair of the Board of Directors from 2001 to 2011. He published many articles in Development, including some of the work that led to his 2012 Nobel Prize for cloning amphibians by nuclear transfer.

#100biologists #biologists100

The Company of Biologists 100 logo to the left and QR code to the right. Portrait of John Gurdon to the left, text to the right 100 extraordinary biologists John Gurdon John Gurdon was Chair of the Board of Directors from 2001 to 2011. He published many articles in Development, including some of the work that led to his 2012 Nobel Prize for cloning amphibians by nuclear transfer. #100biologists #biologists100

We are also highlighting John Gurdon, 2012 Nobel laureate in Physiology or Medicine and former Chair of the Board of Directors at @biologists.bsky.social, as an extraordinary biologist. #100biologists

10.04.2025 12:13 πŸ‘ 24 πŸ” 8 πŸ’¬ 1 πŸ“Œ 0
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We're excited to host two fantastic speakers at our next online @physicsoflifeuk.bsky.social ECR Seminar on Tuesday 15 April, 2–3 PM BST:
Tisma Milos and Thomas McLean
chaired by @veronicabiga.bsky.social

Please register below for the Zoom link:
lnkd.in/dSynrAe8

10.04.2025 10:44 πŸ‘ 8 πŸ” 3 πŸ’¬ 0 πŸ“Œ 2
The Company of Biologists 100 logo to the left and QR code to the right.
 
Portrait of Kate Storey to the left, text to the right
 
100 extraordinary biologists

Kate Storey

Kate Storey served as a Director from 2007 to 2022. She initiated the Company's Workshops programme and co-organised the first Workshop. Kate also co-initiated the Company's support for Sustainable Conferencing. Kate's lab researches nervous system development at the University of Dundee, UK.

#100biologists #biologists100

The Company of Biologists 100 logo to the left and QR code to the right. Portrait of Kate Storey to the left, text to the right 100 extraordinary biologists Kate Storey Kate Storey served as a Director from 2007 to 2022. She initiated the Company's Workshops programme and co-organised the first Workshop. Kate also co-initiated the Company's support for Sustainable Conferencing. Kate's lab researches nervous system development at the University of Dundee, UK. #100biologists #biologists100

We are highlighting Kate Storey, who served as a Director at @biologists.bsky.social from 2007 to 2022 and co-founded the Company’s Workshop programme, as an extraordinary biologist. #100biologists

08.04.2025 12:08 πŸ‘ 18 πŸ” 5 πŸ’¬ 1 πŸ“Œ 0
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Papalopulu Lab: Quantitative Dynamic Biology

While we update our page- you can check out more on our website papalopululab.wordpress.com

08.04.2025 12:11 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

We just joined Bluesky and we're hoping to connect with fellow scientists interested in quantitative and developmental biology! Follow us for future updates! Logo credit goes to @golgigraphics.bsky.social

08.04.2025 12:11 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0