Thanks Steve! No worries 😊

GitHub - HoldenLab/micromorph: Microbial morphology analysis in python Microbial morphology analysis in python. Contribute to HoldenLab/micromorph development by creating an account on GitHub.

Big thanks to @seamusholden.bsky.social and all the Holden lab members for supporting me during this project and helping me troubleshoot the code/testing it for me!

Link to the github repo: github.com/holdenlab/mi...
Link to the documentation: holdenlab.github.io/micromorph/

micromorph: a Python toolkit for measurement of microbial morphology Detection of morphological phenotypes from light microscopy is a key part of microbiology. Despite advances in automated morphological analysis, accurate measurements still often require significant u...

Happy to finally share micromorph with everyone!
If you are interested in performing morphological measurements of bacteria, and like using Python and Napari then this is for you!

You can read about it in our preprint, and find the code on our Github repo, PyPi or directly from the napari hub!