Charles University Structural Bioinformatics Group

🌿 The Botanical Garden of Charles University’s Faculty of Science turns 250! Founded in 1775, it is one of Central Europe’s oldest university gardens.

Join us for a special anniversary program 15–21 Sept 2025. 🎉

@unikarlova.cuni.cz @botanickazahradauk.bsky.social

ferritin 3d model

ferritin 3d model open

today #3Dprint protein is ferritin (PDB: 6I36)

available here:
www.printables.com/model/141627...

Kickstarting our symposium “Protein Annotations in the age of AI” at UCL!

We opened Day 2 of our #CECAM flagship workshop in Prague with the CECAM director Andrea Cavalli, highlighting steered #MD, dynamical docking & the complexity of binding energetics, and the challenges ahead. 🚀

#CECAMinPrague @iocbprague.bsky.social @cecamevents.bsky.social @iocbtech.bsky.social

CATH turns 30 years old 🥳
They celebrate with a Symposium on September 16th! I'll be presenting our work: "An Atlas of Energetic Evolutionary Constraints Across Protein Families"

Unbelievable selection of speakers! So if you are around London, you can register to attend:
tinyurl.com/2pnk8hj5

The first day of our bioML symposium at @iocbprague.bsky.social went very well. It is amazing to see how fast this field is moving forward. Thanks to everyone for the fantastic talks! 🤖🧬

🚀 GPU-accelerated docking to P2Rank-predicted pockets

Fantastic to work with so many talented people! today at departmental conference of cell biology department of @sciencecharles.bsky.social . Many thanks to our guests from Israel for joining us and sharing their results and time with us

Congratulations! 🎉

Screenshot of PrankWeb.

🚀 Our paper on the updated PrankWeb, a web app for protein binding site prediction using P2Rank, is out in
@narjournal.bsky.social. Now with docking integration!

👨‍💻 Try it: prankweb.cz
📄 Paper: doi.org/10.1093/nar/...
💻 GitHub: github.com/cusbg/prankweb

Developed at @cusbg.bsky.social

I am #exhilarated to share that our new paper "LIGYSIS-web: a resource for the analysis of protein-ligand binding sites" is now published in @narjournal.bsky.social! After almost two years of development and more than 600 commits, LIGYSIS-web is out!

📜 : tinyurl.com/utges-LIGYSI...

Join us for the next #Bioinformatics seminar hosted by
@sciencecharles.bsky.social and @mff.unikarlova.cuni.cz. Nora Martin from CRG : “How does the structure of a genotype-phenotype map shape variation and evolutionary processes?”.

📅 Wed, Apr 30
🕕 17:20

bioinformatics.cuni.cz/seminar

Back in July 2023 we organized a small bioML symposium at @iocbprague.bsky.social, and it turned out to be a very pleasant and successful event. This summer we are following up with a great line-up of speakers. Please register for free, deadline May 30. tinyurl.com/bioMLPrague25

3DSIG has now joined BlueSky!! Follow us there to keep building a strong community around the fields of Structural Bioinformatics and Computational Biophysics!

A new preprint from our lab at @fchupol.bsky.social

🧪🇨🇿 A reminder: there’s a starter pack with Czech science institutions and research labs. A bunch of new ones have joined Bluesky lately -- and some, like Charles University (@charlesuni.cuni.cz), have fully made the move here from the other place.

Adding
@tc-praha.bsky.social
@vut.cz
@peterslab1.bsky.social

Adding @ceitec.eu

Adding @mff.unikarlova.cuni.cz

go.bsky.app/NaGFZwf

Joe et al. have a fresh preprint on the MARTINI simulations of the #ribosome.

arxiv.org/abs/2503.21357

Galaxy intro by Martin Čech

we continue 1st @elixircz.bsky.social PhD conference with keynote by Martin Čech from @iocbprague.bsky.social and Cesnet on usegalaxy.cz

Added @structbiocssb.bsky.social

Adding @cts.cuni.cz

conference is well attended ;)

1st @elixircz.bsky.social PhD conference at Telč on 27-28th March 2025 superthread.

🎉 #ELIXIRCZ celebrated 10 transformative years in life sciences! Thanks, everyone, for celebrating with us!

🥂 Cheers to a decade of growth & many more to come! #Science #Innovation #DataScience @elixir-europe.org
www.elixir-czech.cz/news/10-year...

we continue 1st @elixircz.bsky.social PhD conference (I should made a hashtag - too late) with student presentations

We are grateful and fortunate to have Sameer Velankar, the head of @pdbeurope.bsky.social, to start first ever @elixircz.bsky.social phd conference. Thank you RSJ and @elixircz.bsky.social for general support!

Sameer Velankar speaks about PDBe

we continue with keynote lecture by Sameer Velankar from @pdbeurope.bsky.social