'wwPDB News' with virus capsid protein assembly in the background
The PDB anticipates that it will run out of all 4-character PDB IDs by 2029! π€―Anticipating this, we are planning for a PDB ID with an extended length and prepending βPDBβ - e.g. "1abc" will become "pdb_00001abc"
β¬οΈ Read more β¬οΈ
www.wwpdb.org/news/news?ye...
Chemical structures in 3 different sizes of spheres. Each sphere has a different label: 41393 CCDs, 1115 PRDs, 2745 CLCs.
Interested in small molecules π§ͺ βοΈ & 3D macromolecular structures? 'Accessing Enhanced Small Molecule Information in the Protein Data Bank in Europe' by @preeti_cy (Winter 2023 @RSC_CICAG Newsletter)
β¬οΈ Quick read β¬οΈ
www.rsccicag.org/newsletters....
This week's #PDB release has 335 new entries, including this cryo-EM structure of a phage-inducible chromosomal island-like element procapsid-like particle (pdbe.org/8G1R). Find all the new entries at pdbe.org/latest
232 new entries in #PDBrelease (pdbe.org/latest)! Here is the cryo-EM derived structure of the bacteriophage 80Ξ± capsid containing DNA that infect π. ππ’πππ’π (pdbe.org/8vd4). Such structures provide understanding about capsid assembly and DNA packaging.
wwPDB letters spelled-out with protein structures
As we head into 2024, let's take one final look back at 2023 and how the year unfolded in the PDB archive. There were 14488 entries released last year but what more can we find out about those structures βοΈ? A thread 1/10 π§΅
Don't forget to pick-up your PDBe calendar at the π· CCP4 Study Weekend 2024 π·
Conference lobby with CCP4 conference advertised
CCP4 study weekend booklet
Excited to be attending π· #CCP4SW 2024 / @ccp4_mx Study Weekend π·. In-person Lunchtime Bytes session on Day3 (Jan 5th) with PDBe. Look out for friendly PDBe representatives Sue (@sganguly) & Gen (@gleevans).
This week's #PDB release has 105 new entries, including this X-Ray structure of the adenylyl cyclase of Ziziphus jujuba (Chinese date fruit) (pdbe.org/8H92). Find all the new entries at pdbe.org/latest
Structure image in background with PDBe logo in green and red at bottom right corner and text in a circle in the centre that reads 'PDBe is a founding member of the wwPDB consortium' with a green banner with white text that reads 'wwPDB'
Structure image in background with PDBe-KB logo in green and red at bottom right corner and text in a circle in the centre that reads 'PDBe-KB is a consortium providing structural and functional annotation data' with a green banner with white text that reads 'PDBe-KB'
Structure image in background with a circle in the centre that reads 'AlphaFoldDB is a collaboration between EMBL-EBI and Google DeepMind' with a blue banner with white text that reads 'AlphaFoldDB'
Structure image in background with 3D-Beacons lighthouse design logo in green, red and grey at bottom right corner and text in a circle in the centre that reads 'The 3D-Beacons consortium provides a single access point for macromolecular structure data' with a green banner with white text that reads '3D-Beacons'
Weβre delighted to have joined BlueSky to engage with the scientific community about macromolecular structures and related data. Follow us for updates on PDB and #AlphaFold DB databases, more info on our resources such as #PDBeKB, and for lots of beautiful structure images!
Oh, I never realized you worked on SMRT and NCOR π€ #teamh12
Is drying gels still a thing now or is everything digitalized?
Our Elixir Structural Bioinformatics talks are now up on youtube. www.youtube.com/watch?v=A71X...
