Congratulations! Super cool research
Congratulations! Super cool research
Important insight into recent history, and a provoking thought we should all be having
Grateful to the Experiment Foundation and Navigation Fund for the "Beyond the Journal" award (experiment.foundation/beyond) recognizing our open science practices in our open source lab manual (rendeiro.group/lab-manual)!
"we have an obligation to create high context environments" agreed - to me that is already true with conventional workspaces. Research data and derivatives should be organized, open, FAIRified, etc - yet I don't see OpenAI focusing on that ever as it'd go against their business model
π Huge congratulations to Lisa Kleissl on winning the APART-MINT fellowship from the @oeaw.bsky.social !
A shared postdoc in our lab and the labs of @lderooij.bsky.social and Georg Stary, Lisa's ideas and research earned the well-deserved recognition π
View from the hotel room
Poster session 2024, with Valentina Boeva, Constantin Ahlmann-Eltze and others
Wednesday afternoon hike incl. swim in the mountain river
Another view from the hotel room
Apply for the Ascona workshop "Statistical and AI methods for multi-modal multi-scale modeling of biological systems", 28 Jun-3 Jul 2026 on Monte VeritΓ , Lago Maggiore at the foot of the Swiss Alps.
ascona2026.sciencesconf.org
Join the AITHYRA-CeMM PhD Open Day tomorrow if you want to join us pushing the boundaries of spatial biology and AI.
cemm.at/phd-open-day...
#PhD #AcademicSky #CompBio #Bioinformatics #MachineLearning
View from Monte VeritΓ onto Ascona and Lago Maggiore
Announcing the Ascona Workshop "Statistical and AI methods for multi-modal multi-scale modeling of biological systems" on 28 June - 3 July 2026 in Ascona, CH
www.huber.embl.de/group/events...
Reserve the dates!
On 2. Lazyvim is a pretty good entry point (www.lazyvim.org)
AITHYRA Global Adjunct Principal Investigator Program:
Advancing AI-Driven Life Science Through Global Collaborations
Learn more about the Program: aithyra.at/fileadmin/do...
Application Deadline, 30 January 2026: application@aithyra.at
#AITHYRA #GlobalAdjunctPI
Sounds really cool and brings back some nice memories from my past working with Eric Thompson. Congratulations!
Data looks super sharp and nice figures, congrats!
This is great to hear, and congratulations @brent-p.bsky.social - bedtools was a critical part of my PhD, wouldn't been able to do anything without it
There are a couple of empty chairs at our table β want to sit with us?
Reach out to me or any lab member www.oeaw.ac.at/gmi/research... Weβll be hiring two postdocs in 2026.
Weβre excited about ambitious and creative ideas and are committed to supporting future group leaders 1/2
Had recently the fastest ever turnover in a manuscript we submitted. All 3 reviewer reports were for sure heavily AI-generated. All have multiple factual errors (e. g. the authors don't specify X -> it's in the manuscript), very generic and asked for 'validation' in a super broad manner π
Warm welcome to Maria and my very best wishes to her as CeMM director - excited for the future of our institute!
Thank you, Marco Demaria (UMCG), for a great #CeMMinar on heterogeneity in cellular #senescence! He shared how senescent cells can both aid tissue repair & drive aging & dysfunction, & how targeting them could support healthy aging. Thanks to our hosts @lderooij.bsky.social & @andre-rendeiro.com
Heinz FaΓmann, ΓAW President, Maria Rescigno, CeMM Scientific Director, Giulio Superti-Furga, CeMM Founding Director (c) Natascha Unkart
Giulio Superti-Furga handing over the CeMM guest book to new Director Maria Rescigno (c) Klaus Pichler
Maria Rescigno (c) Natascha Unkart
CeMM & ΓAW warmly welcome Maria Rescigno as the new CeMM Director. Maria is a highly accomplished researcher specialized in the understanding of the gutβliverβbrain axis.
Press info: https://cemm.at/news
Photo Gallery: https://cemm.at/about-cemm/picture-galleries/2025
#CeMMLife #Director #ΓAW
Just saw Ubuntu 25.04 isn't covered π₯
Understandable to only support LTS releases
π this is great! Many years ago I had a bunch of apt-get installable r-cran- packages that I tried to make play nice with the rest from bio conductor, great that there's a dedicated repo with ready-to-use debs now that included bioc
Installed #Rstats for the first time in a year - my laptop ran out of battery before I managed to install 2 libraries... π€
After working with `uv` for some time, I don't think I can suffer this experience :pain:
One more reason to love Python! Thank you for staying true to your values β€οΈ
Thank you! β₯οΈ
Finally, someone has solved a real problem with AI! No more having to take a paper in the format for a journal that rejected you, and reformat it for a new journal. Well done!! formatmypaper.com
BIG ANNOUNCEMENTπ£: I havenβt been this excited to be part of something new in 15 yearsβ¦ Thrilled to reveal the passion project Iβve been working on for the past year and a half!ππ₯³ (thread π)
π§ Colorectal cancer doesnβt follow a single path.
Using spatial proteomics on ~500 tumors, we found distinct trajectories from early to late stage, involving the whole tumor microenvironment and its metabolic state.
π Preprint: arxiv.org/abs/2510.05083
#SpatialBiology #CRC #ImageBasedProfiling
1/5
Aging reshapes local tissue interactions but most organs retain a resilient overall architecture.
Our atlas provides a new framework to study tissue structure, resilience, and aging.
π¬ Learn more: rendeiro.group
Among 100+ biological and clinical factors, age was the main driver of microanatomical changes.
About 27% of domains shift in abundance over adulthood, yet others remain remarkably stable.
We developed H&E-UTAG, an unsupervised method that detects recurrent microanatomical domains directly from H&E slides.
It identified 218 domains across 40 tissues and 29 organs β revealing how cellular organization underlies organ function.