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#MicrobialCommunities

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Posts tagged #MicrobialCommunities

Picture: A person taking sediment samples in North Rhine-Westphalia. Text: When Microbes Feel the Heat. International Study Uncovers Climate-driven Stress on Riverbed Microbes

Picture: A person taking sediment samples in North Rhine-Westphalia. Text: When Microbes Feel the Heat. International Study Uncovers Climate-driven Stress on Riverbed Microbes

The complex #microbialcommunities in #rivers and streams are essential for stable #ecosystems. However, #microbes in sediment are under constant stress. This has been revealed by a study led @probstlab.bsky.social. #heatstress www.uni-due.de/2025-12-10-s...

@crc-resist.bsky.social

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Correlations of plant and microbial diversity and community composition with ecosystem multifunctionality under different grazing intensities across three grassland types.

Correlations of plant and microbial diversity and community composition with ecosystem multifunctionality under different grazing intensities across three grassland types.

[ #Grazing management (GM)] Plant & Soil microbial communities ➡️ Ecosystem multifunctionality (EMF)

Results:
1️⃣GM⬆️, plant diversity & EMF⬇️;
2️⃣Heavy GM altered the abundance of some plants and #MicrobialCommunities;

#Biodiversity | #EcosystemFunction | #Grassland

doi.org/10.1093/jpe/...

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Let's talk bacterial wars 🤺

Fresh out of the press is a new review on the #T6SS, with striking imagery and great insights into effector diversity and how this powerful nano weapon shapes #microbialcommunities

#bacterialwarfare
@springernature.com

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Accurate profiling of microbial communities for shotgun metagenomic sequencing with Meteor2. #MicrobialCommunities #Metagenomics #MicrobesProfiling #Microbiome
microbiomejournal.biomedcentral.com/articles/10....

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【🎉Latest accepted article】
Stand density–induced #TreeSpeciesDiversity alters microbial #CarbonFixation/degradation genes and soil organic carbon pool during forest rewilding

#SoilOrganicCarbonFractions | #Pathways | #MicrobialCommunities

@mapjournals.bsky.social

doi.org/10.1093/jpe/...

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Predicting functions of uncharacterized gene products from microbial communities. #Metagenomics #GutMetagenomes #GutMetatranscriptomes #ProteinFunctionPrediction #MicrobialCommunities #Genomics #Bioinformatics @natbiotech.nature.com 🧬 🖥️
www.nature.com/articles/s41...

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Chengjie Gao et al. explored the impact mechanism of slope position on tree growth and #AllometricGrowth.

#CalocedrusMacrolepis | #MicrobialCommunities | #SlopePosition | #SoilMicrobialFunctionalGroups

@mapjournals.bsky.social

doi.org/10.1093/jpe/...

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Figure 1 in Van Galen et al. (2025): "The PLFA and enzyme activity database contains 12,258 samples from 3,743 locations. The purple colour gradient shows the degree to which climatic space is represented by the samples (scale of 0 to 1, see Technical Validation section). Grey regions do not have sufficient climate data available to evaluate climatic representation. The histogram and donut plots show number of samples (in parentheses) from the PLFA (blue) and enzyme (red) datasets collected in different years, from different continents, from different biomes43, and within different categories of maximum sample depth. Only large segments of donut plots are labelled. Temp. = temperate."

Figure 1 in Van Galen et al. (2025): "The PLFA and enzyme activity database contains 12,258 samples from 3,743 locations. The purple colour gradient shows the degree to which climatic space is represented by the samples (scale of 0 to 1, see Technical Validation section). Grey regions do not have sufficient climate data available to evaluate climatic representation. The histogram and donut plots show number of samples (in parentheses) from the PLFA (blue) and enzyme (red) datasets collected in different years, from different continents, from different biomes43, and within different categories of maximum sample depth. Only large segments of donut plots are labelled. Temp. = temperate."

New publication: A global #database of #soil microbial phospholipid fatty #acids and #enzyme activities. #microbialcommunities
doi.org/10.1038/s415...

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Postdoctoral Research Scientist - Soil Microbiomes

Applications are open for a #Postdoctoral Researcher to join Dr Falk Hildebrand and Dr Chris Quince at the Earlham Institute, profiling both taxonomic and functional compositions of 3,000 newly sequenced soil sites.

👉 buff.ly/50eScSu

#scijobs #metagenomics #microbialcommunities

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Figure 1 in Ma et al. (2025): "Proposed distribution of microbes along the soil-plant-human gut microbiome axis. Soil, plants, and the human gut are each considered distinct habitats. Within each habitat, specific microbial communities known as habitat specialists are identified. Microbes that are distributed across all habitats are termed here as generalists. Based on their abundance and functions, a group of cross-kingdom microbiota is proposed among the generalist microbes. Created in BioRender. Ma, H. (2025) https://BioRender.com/b51e6if."

Figure 1 in Ma et al. (2025): "Proposed distribution of microbes along the soil-plant-human gut microbiome axis. Soil, plants, and the human gut are each considered distinct habitats. Within each habitat, specific microbial communities known as habitat specialists are identified. Microbes that are distributed across all habitats are termed here as generalists. Based on their abundance and functions, a group of cross-kingdom microbiota is proposed among the generalist microbes. Created in BioRender. Ma, H. (2025) https://BioRender.com/b51e6if."

New publication: The soil-plant-human gut microbiome axis into perspective, by @raaijmakersjm.bsky.social and others. #microbialcommunities #soilmicrobiome #plantmicrobiome #gutmicrobiome
doi.org/10.1038/s414...

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Postdoctoral Research Scientist - Soil Microbiomes

Applications are open for a #Postdoctoral Researcher to join Dr Falk Hildebrand and Dr Chris Quince at the Earlham Institute, profiling both taxonomic and functional compositions of 3,000 newly sequenced soil sites.

👉 buff.ly/50eScSu

#scijobs #metagenomics #microbialcommunities

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Comprehensive taxonomic identification of microbial species in metagenomic data using SingleM and Sandpiper. #Metagenomics #MicrobialCommunities #Bioinformatics @natbiotech.nature.com 🧬 🖥️
www.nature.com/articles/s41...

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Great to see Earlham Institute Group Leader Dr Ruben Garrido-Oter at #2025ISMPMI this morning! 🦠

#microbialcommunities

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Identification of dynamic models of microbial communities Microbial communities, complex ecological networks crucial for human and planetary health, remain poorly understood in terms of the quantitative principles governing their composition, assembly, and f...

We tackle key challenges in ODE-based models: identifiability, instability, underfitting, & overfitting.

Our integrated approach offers a roadmap to more reliable & predictive microbiome models.

🔬 Check it at: doi.org/10.1101/2025... #Microbiome #Ecology #Modeling #MicrobialCommunities

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Post image The 35-day incubation experiment.

The 35-day incubation experiment.

‼️ #Warming🌡️ ➡️ #MicrobialCommunities and substrate mediated ecosystem functions in #Sphagnum- and #ShrubPeatlands
Results: The #CarbonDioxide💨 emission from shrub-dominated peatlands was significantly lower than that from Sphagnum-dominated peatlands.
doi.org/10.1093/jpe/...

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Tea rhizosphere: Circadian rhythms shape #MicrobialCommunities & nutrient cycles. @OxfordJournals
Details: doi.org/10.1093/hr/u...

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Location map of the study site. The number represents sampling sites.

Location map of the study site. The number represents sampling sites.

#AlgalBlooms can affect #MicrobialCommunities in #WetlandEcosystems, but maybe we can utilize microorganisms for #EcologicalManagement. Thus, Yi Wu et al. investigate the #TemporalPatterns of #SedimentBacterialCommunity structure and function succession during algal blooms.
doi.org/10.1093/jpe/...

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River ‘Plastisphere’ Serves as Home to Ecosystem-Draining Organisms New research explores the microbial communities that live on plastic waste and how they impact the 2nd most biodiverse river in the world. DRI researchers Monica Arienzo and Rachel Kozloski are co-aut...

New research co-authored by #DRI's Monica Arienzo & Rachel Kozloski explores the #MicrobialCommunities that live on plastic waste and how they impact the 2nd most #biodiverse river in the world. Read the full story on our website: bit.ly/dririverplas... #DiscoverDRI

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A triangular world with various microbial organisms and tall structures representing compassion and diversity

A triangular world with various microbial organisms and tall structures representing compassion and diversity

A triangular world showcasing a harmonious coexistence of diverse microbial organisms #MicrobialCommunities #Harmony #Diversity #TriangularWorld #Compassion #BiofilmRoles

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New pub: Abandonment of traditional #livestock grazing reduces #soilfertility and enzyme activity, alters soil #microbialcommunities, and decouples microbial networks, with consequences for #forage quality in Mediterranean grasslands, by @rochoahueso...

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