#MicrobiomeDigest

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

2 months ago

January 14, 2026 See you at MVIF next week! Gut microbiomeEarly-life colonization by aromatic-lactate-producing bifidobacteria lowers the risk of allergic sensitization – Pernille Neve Myers – Nature Microbiology&n…

New #MicrobiomeDigest is OUT microbiomedigest.com/2026/01/14/j...

• gut microbiome / @fasnicar.bsky.social
• maternal microbiome / @fzmarques.bsky.social
• bark microbiome / @bobpmleung.bsky.social

See you next week at #MVIF 45 (@microbiomevif.bsky.social)!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

3 months ago

December 05, 2025 See you at MVIF next week! General microbiome Consensus Statement: STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies – Julia M. Kelliher …

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/12/04/d...

• urinary biochem ecology / @mikeneugent.bsky.social

• Microflora Danica atlas / @mkddueholm.bsky.social

• gut lumen -> hypothalamus / ‪@pipethero.bsky.social

See you next week at #MVIF 44 (@microbiomevif.bsky.social)!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

4 months ago

November 5, 2025 See you next week at MVIF! Human gut microbiome Associations Between Gut Microbiome and 24-Hour Blood Pressure Variability: A Cross-sectional Study Highlighting Sex Differences and Potential Therap…

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/11/05/n...

• FMT / @gangfang.bsky.social
• soil / @mingming0105.bsky.social
• drinking water / Paul W. J. J. van der Wielen
& more.

See you next week at #MVIF 43 (@microbiomevif.bsky.social)!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

5 months ago

October 3, 2025 See you at the MVIF 42! Human gut microbiomeMicro-scale spatial metagenomics: revealing high-resolution spatial biogeography of gut microbiomes – Carlotta Pietroni – bioRxiv Animal microbiomeCaptur…

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/10/02/o...

• Shanghai dog microbiome / @annacusco.bsky.social
• microbetag / @hariszaf.bsky.social
• invitation for the #MVIF 42 / @microbiomevif.bsky.social

& more.

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

6 months ago

mikrobiokosmos2025

NEXT WEEK -> #mbkceesme2025 🇬🇷

Drop me a line if you want to chat over ☕ about open science and open source: #BugSigDB #curatedMetagenomicData @microbiomevif.bsky.social #Outreachy @nsurp.bsky.social #microbiomedigest

👋 @mikrobiokosmos.bsky.social

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

6 months ago

September 5, 2025 See you next week at #GloMiNe2025! Gut microbiome Gut fungi are associated with human genetic variation and disease risk – Emily P. Van Syoc – Plos Biology The resident gut microbiome modulates the…

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/09/04/s...

• subspecies of the human gut microbiota / @silask.bsky.social

• red grouse microbiota / @microbes4ever.bsky.social

• "Biopolis – into the microbiome" podcast

• invitation for the next week #GloMiNe2025

& more.

Happy Friday!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

10 months ago

April 30, 2025 See you next week at MVIF!  Skin microbiome Large-scale skin metagenomics reveals extensive prevalence, coordination, and functional adaptation of skin microbiome dermotypes across body sites – Che…

New #MicrobiomeDigest: microbiomedigest.com/2025/04/30/a...

•Herrgårds cheese @jrotwitguez.bsky.social‬
•Asian Skin Microbiome Program @cherrychengchenli.bsky.social ‬
•long-read assemblers @floriantrigodet.bsky.social
•argNorm @vedanthramji.bsky.social

CU next week at @microbiomevif.bsky.social!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

11 months ago

April 11, 2025 Happy Friday and see you next week at MVIF! Gut microbiome The South American MicroBiome Archive (saMBA): Enriching the healthy microbiome concept by evaluating uniqueness and biodiversity of negle…

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/04/10/a...

• The South American MicroBiome Archive / @bvalderrama.bsky.social

• coverM / @aroneys.bsky.social

• #OpenSourceDiaries / Anita Ihuman

• invitation for the next week @microbiomevif.bsky.social

& more.

Happy Friday!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

March 14, 2025 Happy Friday and see you next week at MVIF 37! Gut microbiome Review: The gut microbiota-immune-brain axis: Therapeutic implications – Kenneth J. O’Riordan – Cell Reports Medicine Effects of oral s…

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/03/13/m...

- maternal health / @ccowardin.bsky.social
- AMR<->cigarette / @ulikluemper.bsky.social
- bees / @liliancaesar.bsky.social
- invitation for the next week / @microbiomevif.bsky.social
& more.

Happy Friday!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

March 2, 2025 Hello, have a nice Sunday! In this Digest, we have some highlights from the literature during this week.  Human/General Microbiome Gastrointestinal Tract Microbiome analysis of gut microbiota …

NEW #microbiomedigest by Juan Pablo Cardenas Astudillo:

microbiomedigest.com/2025/03/02/m...

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

February 14, 2025 Check out my list of selected latest microbiome studies and see you next week at #MVIF! Gut microbiome Gut microbiota-derived hexa-acylated lipopolysaccharides enhance cancer immunotherapy response…

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/02/13/1...

- infant gut /‪ @pangenomics.bsky.social‬
- gut-brain / @johannajoyce.bsky.social
- PHLAME / @quevan.bsky.social
- invitation for the next week @microbiomevif.bsky.social
- Outreachy open call
& more.

Happy Friday!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

January 17, 2025 Starting the new year with a new digest out, full of interesting findings.Check it out and see you at MVIF next week! Human gut microbiome Early life microbial succession in the gut follows common …

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/01/16/j...

• Enterobacteriaceae in the human gut / @alexmsalmeida.bsky.social

• microGalaxy / @bebatut.bsky.social

• bacterial vaginosis /‬ @mikeusyk.bsky.social

• invitation for the next week @microbiomevif.bsky.social
& more.

Happy 2025!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

November 29, 2024 NEWS: ” Researchers say the social-media platform — an alternative to X — offers more control over the content they see and the people they engage with.” Source: INVITATION: MVIF&#…

🆕 #microbiomedigest (cc @elisabethbik.bsky.social): microbiomedigest.com/2024/11/29/n...

• collective metabolism/ @micsysecolab.bsky.social
• gut physiology & env/ @hroager.bsky.social
• ☕/ @cibiocm.bsky.social
• urinary tract/ @drrebeccajhall.bsky.social

& @microbiomevif.bsky.social invitation!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

November 8, 2024 Get ready for #MVIF 33 & register here See you next week! Ecology and evolution Community conservatism is widespread throughout microbial phyla and environments – Lukas Malfertheiner – bioRxiv&…

NEW #microbiomedigest (founded by @elisabethbik.bsky.social): microbiomedigest.com/2024/11/08/n...

• community conservatism
• gut-vitiligo
• pre/probiotics

& more new #microbiome studies!
Plus, @microbiomevif.bsky.social invites you to join NEXT WEEK #MVIF!

Happy Friday 👋

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

October 4, 2024 Happy Friday! And see you next week at MVIF! Plastisphere microbiome What harmful microbes are lurking in the world’s 7 billion tonnes of plastic waste? – Changchao Li – NatureRespiratory microbiom…

NEW #microbiomedigest is OUT 👉 microbiomedigest.com/2024/10/03/o...

• plastisphere
• phage therapy
• 344 rats

a hidden ⚽️

& invitation for the next week @microbiomevif.bsky.social!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

September 13, 2024 Happy Friday! And, see you next week at the MVIF and African Microbiome Day events! https://twitter.com/svetlana_up/status/1833508136302293089 Human microbiome Gut Microbiome Transient colonizing micr...

NEW #microbiomedigest is OUT 👉 microbiomedigest.com/2024/09/13/s...

• urinary tract
• IBD
• cats

& invitation for @microbiomevif.bsky.social & #AfricanMicrobiomeDay!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

June 7, 2024 Today's digest features AMPSphere, Candida pathogenesis, rhizosphere microbiome in the Himalayas, imaging of oral microbiome, and more.See you at #MVIF special event on women's health! https://twitter...

NEW #microbiomedigest (@elisabethbik.bsky.social) 👉 microbiomedigest.com/2024/06/06/j...

• AMPSphere
• Candida pathogenesis
• rhizosphere
• tongue imaging

& invitation for @microbiomevif.bsky.social special event on women's health

Happy Friday!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

May 17, 2024 Today's digest features bioinformatics binning methods, healthy dogs, lakes in South Africa, and more. For the human gut microbiome studies, check out the latest digest (May 15, 2024) by Grace Deitzle...

NEW #microbiomedigest 👉 microbiomedigest.com/2024/05/16/m... highlights:

• Fairy / @jimshaw.bsky.social Yun William Yu

• healthy dogs /Silke Salavati

• check out weekly digests by @gmeric.bsky.social

& see you at @microbiomevif.bsky.social special event on microbiome ethics!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

April 12, 2023 Today's digest features human gut microbiome studies on dietary fiber and fasting glucose, ocean microbiome, pangenome approaches, and more. See you at #MVIF! https://twitter.com/MicrobiomeVIF/status/...

NEW #microbiomedigest 👋 microbiomedigest.com/2024/04/11/a...

• dietary fiber

• fasting glucose

• ocean microbiome

• @microbiomevif.bsky.social & #microbiome_net Journal Club invitation!

Happy Friday!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

1 year ago

March 18, 2023 Today's digest features the human gut microbiome atlas of Africa, sociobiome, a large human gut Bacteroidales culture collection, Patescibacteria in global waste water treatment plants, and more. This...

NEW #microbiomedigest (@elisabethbik.bsky.social): microbiomedigest.com/2024/03/18/m...

• human gut microbiome atlas of Africa
• human gut Bacteroidales culture collection
• Patescibacteria in global WWTPs

News: #outreachy contribution started
& see you at @microbiomevif.bsky.social!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

2 years ago

December 15, 2023 Today's digest features house mice gut microbiome, infant gut DNA bacteriophage strain persistence, maternal gut microbiome in pregnancy, and more. Do not miss Francine Marques's opinion on rethinking...

NEW #microbiomedigest microbiomedigest.com/2023/12/14/d...

• home mice
• infant gut DNA bacteriophage
• rethinking culture to unlock the potential of research

& invitation for @microbiomevif.bsky.social NEXT WEEK!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

2 years ago

November 10, 2023 Read about new species discovered in the female genitourinary tract Lactobacillus isalae, Gardnerella pickettii and Gardnerella greenwoodii, and important UTI and other latest microbiome science news....

NEW #microbiomedigest 👉 microbiomedigest.com/2023/11/09/n...

• Lactobacillus isalae / Tom Eilers et al.
• Gardnerella pickettii & G. greenwoodii / Marcia Sousa et al.
• important UTI news / Carlos Flores et al.

& invitation for @microbiomevif.bsky.social

Happy Friday!

Svetlana Ugarcina Perovic

@svetlanaup.bsky.social

2 years ago

October 13, 2023 Today's digest features the Chinese Gut Microbiome Resource, plate readers in the anaerobic chamber, seasonal stability of sponge microbiomes, and more. Also, you can support the outreachy bugsigdb pr...

NEW #microbiomedigest (by @elisabethbik's team) microbiomedigest.com/2023/10/13/o...

Chinese Gut Microbiome Resource
plate readers
sponge microbiome

+ invitation for @microbiomevif.bsky.social

& Outreachy #bugsigdb!

Happy reading!