#PLOSCompBiol

Javier Santoyo

@jsantoyo.bsky.social

5 months ago

Ten simple rules for building and maintaining sustainable high-performance computing infrastructure for research in resource-limited settings. #TenSimpleRules #HPC #ResearchInfrastructure #ResourceLimitedSettings #PLOSCompBiol
journals.plos.org/ploscompbiol...

Javier Santoyo

@jsantoyo.bsky.social

5 months ago

How to write a scientific paper in fifteen steps. #ScientificPaper #PaperWriting #PLOSCompBiol
journals.plos.org/ploscompbiol...

Ákos T Kovács

@evolvedbiofilm.bsky.social

7 months ago

Changes in Spo0A~P pulsing frequency control biofilm matrix deactivation Author summary Bacteria have evolved various adaptation mechanisms to survive under challenging environmental conditions. For instance, under mild starvation, B. subtilis bacteria form biofilms —commu...

Changes in Spo0A~P pulsing frequency control biofilm matrix deactivation

#PLoSCompBiol from Oleg Igoshin

journals.plos.org/ploscompbiol...

Ákos T Kovács

@evolvedbiofilm.bsky.social

1 year ago

iModulonMiner and PyModulon: Software for unsupervised mining of gene expression compendia Public gene expression databases are a rapidly expanding resource of organism responses to diverse perturbations, presenting both an opportunity and a challenge for bioinformatics workflows to extract...

iModulonMiner and PyModulon: Software for unsupervised mining of gene expression compendia

#PLOSCompBiol from Daniel Zielinski
with Bernhard Palsson

journals.plos.org/ploscompbiol...

Ákos T Kovács

@evolvedbiofilm.bsky.social

1 year ago

Estimating mutation rates under heterogeneous stress responses

#PLOSCompBiol by Lucy Lansch-Justen from Helen Alexander

journals.plos.org/ploscompbiol...

Ákos T Kovács

@evolvedbiofilm.bsky.social

1 year ago

Spatial transcriptome-guided multi-scale framework connects P. aeruginosa metabolic states to oxidative stress biofilm microenvironment

-in #PLoSCompBiol

journals.plos.org/ploscompbiol...

BF Francis Ouellette

@bffo.bsky.social

1 year ago

Raising awareness of uncertain choices in empirical data analysis: A teaching concept toward replicable research practices Author summary Throughout their education and when reading the scientific literature, students may get the impression that there is a unique and correct analysis strategy for every data analysis task ...

From #PLOSCompBiol | Raising awareness of uncertain choices in empirical data analysis: A teaching concept toward replicable research practices | #bioinformatics #education | journals.plos.org/ploscompbiol...

BF Francis Ouellette

@bffo.bsky.social

2 years ago

Studentsourcing—Aggregating and reusing data from a practical cell biology course Practical courses mimic experimental research and may generate valuable data. Yet, data that is generated by students during a course is often lost as there is no centrally organized collection and st...

New in #PLOSCompBiol | Studentsourcing—Aggregating and reusing data from a practical cell biology course | #Education #Bioinformatics #OpenScience | journals.plos.org/ploscompbiol...
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