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Posts tagged #Rpackage

A SEM example – lavaan.org

To get started in #lavaan we just take a path diagram and write out the relationships between the variables, see here:

lavaan.ugent.be/tutorial/sem...

A neat #Rpackage for visualizing results in lavaan is semPlot, also by @sachaepskamp.bsky.social. It can be used to visualize models and results.

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Every #TidyTuesday I am amazed by what #DataViz Queen @nrennie.bsky.social can create in #ggplot2!

Her TidyTuesday cookbook 📕🍜 is available here: nrennie.rbind.io/art-of-viz/ and goes into best practices and tricks. I also love the GIFs she creates using the camcorder #Rpackage!

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Foto of a feminine nonbinary person in a purple floral shirt in front of a purple poster. The poster is displaying a structural equation model analysing the influence of parental education on children’s school grades. The person is smiling cheekily to the side.

Foto of a feminine nonbinary person in a purple floral shirt in front of a purple poster. The poster is displaying a structural equation model analysing the influence of parental education on children’s school grades. The person is smiling cheekily to the side.

Foto of a child with four fluffy buns and blue sunglasses. The child has lowered the sunglasses below their nose and is gazing over them.

Foto of a child with four fluffy buns and blue sunglasses. The child has lowered the sunglasses below their nose and is gazing over them.

Hi, I’m this week’s curator, Josi! I‘m a PhD student in statistical genetics 🧬 and use #RStats to do #SEM. I dabble in #DataViz and recently wrote my first #Rpackage. My hobbies are reading #Fantasy books 📚 and #maximalism. You may catch me at a conference matching my outfit to my poster 🤓🧜🏽‍♀️ #rladies

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NITheCS & SU Seminar: GPAbin: an R package for unified visualisations of imputed data sets
Dr Johané Nienkemper-Swanepoel (SU)
📅 Fri, 13 Feb | 13h10–14h10 SAST
Attend online or in person.
🔗 buff.ly/r9QUAmL
#RStats #RPackage #CRAN #DataScience #Statistics #DataVisualisation #Biplot #DataAnalytics

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Using CATAcode for Choose-All-That-Apply Sexual Orientation and Gender Questions In mid-2025, I collected data from trans participants, and some of my survey questions were choose-all-that-apply. Since that time, Merrin and Nickodem (2025) released an R package, CATAcode, to he…

Started a blog! One of my first posts walks through how to prep your data to use the CATAcode #rpackage (with code + diagrams). With CATAcode, you can easily summarize and visualize responses from choose-all-that-apply questions:

catchingsplinters.wordpress.com/2026/01/27/u...

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typeR - Typing Animation for R Code Simulate typing animation for R scripts, R Markdown, and Quarto documents with optional live code execution.

🎉 Excited to announce that typeR is now on CRAN!

typeR simulates typing animations for R scripts - perfect for live coding demos and presentations.

Install: install.packages("typeR")
Docs: fgazzelloni.github.io/typeR/

#rstats #RPackage

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Gosh, #Apollo #Rpackage really needs an extension which 1. translates the t-statistics into significance levels and 2. an extension which exports statistical output in tables ready for word or LATEX. 😵 #choicemodelling

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Quantifying Spatial and Environmental Effects in Spatial Autoregressive Model with the spatialreg.hp R package Abstract. Ecological data frequently exhibit spatial autocorrelation, whereby geographically proximate sampling units are more similar in species distribut

【🎉Latest accepted article】
Quantifying Spatial and Environmental Effects in Spatial Autoregressive Model with the spatialreg.hp #RPackage

#AverageSharedVariance | #HierarchicalPortioning | #SpatialAutocorrelation | #VariationPartitioning

@mapjournals.bsky.social

doi.org/10.1093/jpe/...

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Take a look at our new #Rpackage #BlueCarbon! BlueCarbon facilitates the estimation of #organiccarbon stocks and sequestration rates from soil and sediment cores in depositional environments.

#seagrass #wetlands #mangroves #bluecarbon

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Introducing fwtraits – an R package for obtaining freshwater biodiversity trait information Species ecological parameters are crucial for understanding the functional responses to environmental perturbations, aiding in informing conservation …

#Freshwater #Ecologists - check out this new #RPackage called fwtraits which integrates parameters from FWE www.freshwaterecology.info

Link: www.sciencedirect.com/science/arti...

#FreshwaterEcology #RStat #Statistics #BigData 🌍

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rminer: Machine Learning Classification and Regression Methods Facilitates the use of machine learning algorithms in classification and regression (including time series forecasting) tasks by presenting a short and coherent set of functions. Versions: 1.5.0 impro...

New rminer 1.5.0 available at CRAN:
cran.r-project.org/package=rminer
#machinelearning #r #classification #regression #rpackage

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pushoverr: Send Push Notifications using 'Pushover' Send push notifications to mobile devices or the desktop using 'Pushover' <<a href="https://pushover.net" target="_top">https://pushover.net</a>>. These notifications can display things such as…

📱✨ Check out {pushoverr} — an R package for sending push notifications straight from your scripts! Perfect for alerts when jobs finish, results are ready, or plots are generated.

🔗 cran.r-project.org/package=pushoverr

#rstats #RPackage #DataScience

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The Comprehensive R Archive Network

🎲 Want to add a little playfulness to your R sessions? Check out {fun}- a package full of classic games (Minesweeper, sliding puzzles, Gomoku) and quirky utilities all in R.

Try demo(package = "fun") to see what it can do!

🔗 cran.r-project.org/package=fun

#rstats #RPackage #UseR #FunWithR

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GitHub - r-lib/cli: Tools for making beautiful & useful command line interfaces Tools for making beautiful & useful command line interfaces - r-lib/cli

✨ Check out {cli} - an R package for beautiful command-line interfaces!

Use it to add headings, alerts, lists, progress bars & more, with built-in colors and themes. Perfect for making console output clear and stylish.

🔗 github.com/r-lib/cli

#rstats #RPackage #cli

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DRtool Offers Interactive Diagnostics for High-Dimensional Clusterings

DRtool Offers Interactive Diagnostics for High-Dimensional Clusterings

DRtool, an R package now on CRAN, provides interactive diagnostics for high‑dimensional embeddings, including neighborhood preservation plots and noise‑sensitivity sliders. Read more: getnews.me/drtool-offers-interactiv... #drtool #rpackage

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captioner package - RDocumentation Provides a method for automatically numbering figures, tables, or other objects. Captions can be displayed in full, or as citations. This is especially useful for adding figures and tables to R markd...

Descobri o #Rpackage captioner. Ele cria "etiquetas" para referência cruzada no #Rmarkdown. Eu só usava eq, tab e fig até então. Vou tentar criar etiquetas específicas pra mapas, figuras e quadros, também. Volto aqui pra dizer como foi.

www.rdocumentation.org/packages/cap...

#rstats #rlang

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We present our MetaProViz #Rpackage for #metabolomics analysis & prior knowledge integration to generate mechanistic hypotheses on how metabolic changes affect metabolite classes, pathways & environment interaction

🔗
www.biorxiv.org/content/10.1...

📦
saezlab.github.io/MetaProViz/

🧵 Thread ⬇️

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This study introduces smartSim, an #Rpackage for simulating Smart-seq3 reads with known and novel splicing events. It models key experimental parameters using real data distributions and produces realistic FASTQ files for benchmarking splicing-aware tools and isoform reconstruction methods.

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pretestcad: An R Package For Pretest Probability For Coronary Artery Disease | Personal website of Jeremy Selva Here is a talk I gave on useR! 2025

Here are the slides to my lightning talk⚡🗣️ about my R package 📦 {pretestcad} presented today at useR! 2025 @user-conf.bsky.social

jeremy-selva.netlify.app/talk/2025-08...

👩‍💻 #rstats 👨‍👩‍👦‍👦 #rcommunity 📦 #rpackage 📈 #useR2025 🫀 #cardiology ⚕️ #medicalresearch 💊 #clinicalresearch

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🎤 Excited to share that I presented at useR! 2025 in Durham, NC! 🇺🇸

Gave a talk on cardinalR: Generating interesting high-dimensional data structures 🎤

📽️ jayani-user2025.netlify.app

#useR2025 #RStats #DataScience #HighDimensionalData #Visualization #RPackage

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Hex sticker of pretestcad.

Hex sticker of pretestcad.

I have brought some hex sticker for my R package 📦 {pretestcad} to give out during the useR! 2025 conference at Duke University Durham, North Carolina, USA.

Hope to meet new people and catch up with familar ones there.

cran.r-project.org/web/packages...

#rstats #rcommunity #rpackage #useR2025

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#Rpackage #qualityanalysis
New update for R package “resquin” – More functions for better response quality analysis


The R package “resquin,” short for “response quality indicators,” has been updated and now offers even more options for analyzing and evaluating response quality.

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To finish the second day of the Konstanz School of Collective Behaviour 2025 (#KSCB2025), a great #tutorial by Michael Chimento @mchimento on #Network-Based #Diffusion #Analysis (#NBDA) and his #RPackage #STbayes.

@cbehav.bsky.social

https://www.exc.uni-konstanz.de/kscb/

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My R software package - BgeeDB (lnkd.in/dcfXWR4d) that is meant to annotate the genes and anatomical structures from sequencing technologies can be used in ***🩺🩻 SPACE MEDICINE 🩺🩻***🚀🚀🚀👽🛸#loveit #rpackage #softwareforspace #misskomljenovic #spacemedicine

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1/ OpenVal’s curated package list is built from collective industry needs, not just vendor opinion. Each #RPackage is validated, trusted, and used across multiple sponsor organizations. So you don’t just get safety, you get industry momentum. #OpenSource #DataValidation

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Every R package deserves more than just unit tests.

Let’s break down the four essential layers of testing for robust, reliable code.
👇

#rstats #testing #rpackage #opensource #quality

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@nmoraislab.bsky.social #Rpackage #Transcriptomics #RNAseq #GeneSets

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Cool, my #Rpackage `densityratio` got into the May top 40 on R Works!

#RStats

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For those interested in @esa, there is a “Space in the city” festival at Karlsplatz in Vienna, check out the program! My R software package BgeeDB will be hopefully used in space. The R package is related to gene annotations and lifestages. #misskomljenovicforspace #rpackage #bioinformatics

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Tidy Population Genetics We provide a tidy grammar of population genetics, facilitating the manipulation and analysis of data on biallelic single nucleotide polymorphisms (SNPs). `tidypopgen` scales to very large genetic data...

We are excited to announce that tidypopgen – a new package for rapid population genetic workflows in R – is now available at evolecolgroup.github.io/tidypopgen/ 🧬💻 Read more in the preprint describing its features here: www.biorxiv.org/content/10.1... #popgen #Rpackage #genetics 1/2

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