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Posts tagged #connectomics

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Mapping the brain requires slicing tissue into thousands of sections and reconstructing it piece by piece. 🧠 Dr. Sven Truckenbrodt explains why data reconstruction is a major bottleneck in #connectomics.

Check out the full episode here: youtu.be/a4qpFpjnOX4

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Whole-brain connectomes are rare and expensive “hero datasets.” 🧠 Dr. Sven Truckenbrodt explains why cost and scalability limit comparative #connectomics, and why that matters for #neuroscience.

Check out the full episode here: youtu.be/a4qpFpjnOX4

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What does #connectomics actually give us? 🧠 It doesn’t explain behavior by itself but it provides the structural blueprint of neural circuits. Check out our latest episode for more on #connectomics and #brainresearch.

Check out the full episode here: youtu.be/a4qpFpjnOX4

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How small is a synapse? At just nanometers scale, these tiny structures define brain connectivity. 🧠 Dr. Sven Truckenbrodt explains why synapse size matters for #neuroscience and #connectomics. Subscribe for more cutting-edge science!

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🚨NEW EPISODE🚨

How do we map the #brain at molecular resolution?

@sventruckenbrodt.bsky.social Dr. Sven Truckenbrodt explains #connectomics, #expansion microscopy, neuronal barcoding, and why scaling brain mapping is still a major challenge.

🔗Link to the video: youtu.be/a4qpFpjnOX4

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Original post on mastodon.social

Sunday slow rereading on #neuroscience #drosophila #flybrain #electromicroscopy #connectomics #omics

Holy Molly forgot this top notch quotation!?

,There is a before and after connectome—B.C. and A.C.’

@albertcardona referencing a well-known quote from #columbiaun #TheoreticalNeuroscience […]

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The University of Pittsburgh has closed again today for essential personnel only.

But @csigulinsky.bsky.social and James Anderson are here at the house working on #connectomics exploring gap junctions while in front of the fireplace.

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Allen Institute Summer Workshop on the Dynamic Brain 2026 August 23 - September 6, 2026 Friday Harbor, WA Applications are due February 1, 2026

Allen Institute | Summer Workshop on the Dynamic Brain 2026

Application deadline: February 1

#workshop #neuroscience #brain #connectomics #neurophysiology ./1

www.complexitycat.org/posts/AllenI...

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Video

Join our Memory Decoding journal club "Structure and function of the hippocampal CA3 module" (Sammons et al.) w/ Randal Koene on Tue, Jan 27 at 3pm PT carboncopies.org/aspirational... #memory #decoding #aspirational #neuroscience #hippocampus #connectomics #CA3

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Join our Memory Decoding journal club "Structure and function of the hippocampal CA3 module" (Sammons et al.) w/ Randal Koene on Tue, Jan 27 at 3 PM PT carboncopies.org/aspirational...
#memory #decoding #aspirational #neuroscience #hippocampus #connectomics #CA3

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Invest in Brains, Not GPUs - Adam Marblestone and Dwarkesh Patel

#connectomics #investment #ai

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Surprise mother$#@%er!

Q: What does this mean for neural systems to understand them?

A: We absolutely need the wiring diagram. All synapses, chemical and electrical.

#Connectomics

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This is the way!

#connectomics

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Two nerve nets are formed in Hydra vulgaris: the endodermal (cyan) and the ectodermal (purple) net. (B) Intraepithelial neurons are randomly scattered between the epithelial cells of the two germ layers. (C) Two types of connections have been found between Hydra’s neurons. (D) Endodermal neurons are in physical touch with each other by forming neural handshakes by digiform endings, which get intertwined. (E) In other places, clusters of vesicles of different types can be released to mediate volume transmission between neurons and between neurons and other cells.

Two nerve nets are formed in Hydra vulgaris: the endodermal (cyan) and the ectodermal (purple) net. (B) Intraepithelial neurons are randomly scattered between the epithelial cells of the two germ layers. (C) Two types of connections have been found between Hydra’s neurons. (D) Endodermal neurons are in physical touch with each other by forming neural handshakes by digiform endings, which get intertwined. (E) In other places, clusters of vesicles of different types can be released to mediate volume transmission between neurons and between neurons and other cells.

Our dispatch:

www.sciencedirect.com/science/article/pii/S096...

on the recent Hydra volume EM paper by Zhang, Rafa Yuste and colleagues:

#connectomics, without synapses

www.sciencedirect.com/science/article/pii/S096...

#neuroscience

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I had a preview of this verrrry cool manuscript from @john-m-ball.bsky.social and @wei-li-vision.bsky.social’s lab at NIH/NEI.

Now it’s out. Check it!

#Connectomics

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Are you looking for an exciting, cutting-edge #postdoc position in a project exploring the connection between #connectomics #neuroimaging and #lipidomics #functional_genomics ? Here is a great one shared between my and @JonathanRepple group in Frankfurt and Bonn !

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Don’t miss the Nanosymposium NANO024 – Connectomics at #SfN2025!
📍 SD Convention Center, Room 33
⏰ 8 - 11:30 AM PST
12 speakers from academia & industry exploring #connectomics across species and questions.
With Gregor Schuhknecht (MPI Brain Research) @mpibrain.bsky.social and Helene Schmidt (ESI)

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At #SfN25 (booth 3631), we're demonstrating our skeletonization pipeline, which converts MICrONS EM data to simulation-ready morphologies with spines.

www.openbraininstitute.org/sfn-2025
Stop by for some Swiss 🇨🇭goodies & technical discussions!
#Neuroscience #Connectomics #ComputationalNeuroscience

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Reading about #Connectomics today.

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Thank you so much @wellcometrust.bsky.social for supporting us to push the the limits of #X-ray #nanoimaging and #connectomics, and to make technology more broadly available to the scientific community! 🙏

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Journal club TODAY at 3 pm US Pacific Time: Functional Connectomics Reveals General Wiring Rule in Mouse Visual Cortex -- join at carboncopies.org/aspirational... #neuroscience #memorydecoding #aspirationalneuroscience #connectomics #mouse

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🪰 166,000 neurons! The new blueprint of the fruit fly brain! The latest Drosophila connectome maps every neuron and synapse across brain and nerve cord. (Nicolas Hubacz)

🎥 Philip Hubbard/Alexandra Fragniere
📊 FlyEM Project Team, Cambridge C. G., Google Res.

#FruitFly #Neuroscience #Connectomics

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Video

Excited to share our new #biorxivpreprint:
“Sexual dimorphism in the complete connectome of the Drosophila male central nervous system” www.biorxiv.org/content/10.1...

We describe the #connectomics reconstruction and analysis of an entire adult #maleCNS #drosophila central nervous system. 1/10

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🏆 Brain Prize winner Larry Abbott speaks now at #ECNP2025!
🧠 “Neuroscience and neurology in the age of connectomics”
Don’t miss this Plenary Lecture on how #connectomics is reshaping our view of the brain.

#Neuroscience #BrainPrize Lundbeckfonden

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And here's the official announcement from our Janelia collaborators with a fantastic visualisation from @philiphubbard.bsky.social. See more at male-cns.janelia.org/media. Downloads are humming and we have solved the first data access queries. Happy exploring! #drosophila #connectomics #malecns.

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Preview
Male CNS Connectome A team of researchers has unveiled the complete connectome of a male fruit fly central nervous system —a seamless map of all the neurons in the brain and nerve cord of a single male fruit fly and the ...

Exciting news for #drosophila #connectomics and #neuroscience enthusiasts: the Drosophila male central nervous system connectome is now live for exploration. Find out more at the landing page hosted by our Janelia FlyEM collaborators www.janelia.org/project-team....

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EDT-PA Evolvable Graph Diffusion Boosts Brain Connectome Modeling

EDT-PA Evolvable Graph Diffusion Boosts Brain Connectome Modeling

EDT‑PA aligns structural and functional brain connectivity with optimal transport, achieving higher classification accuracy on the REST‑meta‑MDD and ADNI datasets. getnews.me/edt-pa-evolvable-graph-d... #connectomics #neuroimaging

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Lightweight Model SimpSyn Improves Invertebrate Synapse Detection

Lightweight Model SimpSyn Improves Invertebrate Synapse Detection

SimpSyn, a U‑Net with dual pre/post channels, outperformed Synful on EM datasets from Drosophila and the wasp Megaphragma viggianii, achieving higher F1‑scores. Read more: getnews.me/lightweight-model-simpsy... #simpsyn #connectomics #neuroscience

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Translating the Transcriptome: A Connectomics Approach for Gene-Network Mapping and Clinical Application
Acevedo, N., Akram, H. et al.
Paper
Details
#Connectomics #GeneNetworkMapping #ClinicalNeuroscience

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