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Today is the last day to apply to be #mSystemsJ Senior Editor!

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Deadline approaching! 🚨 #mSystemsJ seeks 6 Senior Editors to bring the journal into the future! ⏳Apply by March 23 to shape the direction of systems biology: asm.social/2km #ASMJournals

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🌱🔬The most time-intensive and difficult paper of my PhD is now published in #mSystemsJ! I'm proud of this work and also how much I've grown since I first started this experiment. Read on to learn more about how the functions of bacterial communities impact plant growth and health. 👇

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Evolution and maintenance of a large multidrug-resistant plasmid in a Salmonella enterica Typhimurium host under differing antibiotic selection pressures | mSystems The plasmid-mediated dissemination of antibiotic resistance genes has become a significant concern for human health, even though the carriage of multidrug-resistant (MDR) plasmids is frequently associ...

Evolution and maintenance of a large multidrug-resistant plasmid in a Salmonella enterica Typhimurium host under differing antibiotic selection pressures

-in #mSystemsJ

journals.asm.org/doi/10.1128/...

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Superb #mSystemsJ by @ruthlessruth15.bsky.social et al from @markjmandel.bsky.social

Functional analysis of cyclic diguanylate-modulating proteins in Vibrio fischeri
"protein OE to systematically characterize the functional potential of all 50 V.fischeri proteins"❗️

journals.asm.org/doi/10.1128/...

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Microbial diversification is maintained in an experimentally evolved synthetic community

#mSystemsJ by Zahraa Al-Tameemi and Alejandra Rodriguez at UCIrvine

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Pan-genome-scale metabolic modeling of Bacillus subtilis reveals functionally distinct groups

#mSystemsJ from Karsten Zengler

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Genomics and synthetic community experiments uncover the key metabolic roles of acetic acid bacteria in sourdough starter microbiomes

#mSystemsJ

journals.asm.org/doi/10.1128/...

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Clearing the plate: a strategic approach to mitigate well-to-well contamination in large-scale microbiome studies

#mSystemsJ from Knight lab
with Pieter Dorrestein

journals.asm.org/doi/10.1128/...

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Feeling hormonal? Insights into bacterial auxin sensing and its physiological effects | mSystems Feeling stressed is a common experience for humans. But at least, we mostly deal with our own hormones. In contrast, plant-associated microbes may also be exposed to the hormonal cues of their plant h...

Feeling hormonal? Insights into bacterial auxin sensing and its physiological effects

#mSystemsJ commentary by Anne van der Meij on the recent #mSystems paper from Miguel Matilla lab

journals.asm.org/doi/10.1128/...

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Announcing the mSystems special collection on microbial dormancy | mSystems Many microorganisms can persist in a reversible state of reduced metabolic activity called dormancy. Dormancy allows microbes to survive unfavorable conditions, disperse and immigrate widely, broaden ...

Announcing the mSystems special collection on microbial dormancy

#mSystemsJ Editorial by Ashley Shade

journals.asm.org/doi/10.1128/...

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Happy to share our new publication by Mark Lyng in #mSystemsJ that dissects Pseudomonas taxonomy interaction with Bacillus subtilis during biofilm formation
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A novel barcoded nanopore sequencing workflow of high-quality, full-length bacterial 16S amplicons for taxonomic annotation of bacterial isolates and complex microbial communities

#mSystemsJ

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Host-associated microbes mitigate the negative impacts of aquatic pollution

#mSystemsJ Perspective by @racheldiner.bsky.social, Sarah Allard, and @gilbertjacka.bsky.social

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Interspecies synergistic interactions mediated by cofactor exchange enhance stress tolerance by inducing biofilm formation
-in #mSystemsJ
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Pangenomic landscapes shape performances of a synthetic genetic circuit across Stutzerimonas species | mSystems Contemporary synthetic biology endeavors often default to a handful of model organisms to host their engineered systems. Model organisms such as Escherichia coli serve as attractive hosts due to their tractability but do not necessarily provide the ideal ...

Pangenomic landscapes shape performances of a synthetic genetic circuit across Stutzerimonas species
#mSystemsJ
journals.asm.org/doi/10.1128/...

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Such a nice email before boarding a long direct flight towards #ISME19, another work accepted today at #mSystemsJ by Mark Lyng5 🎉🎉🎉

(and a new preprint online, but no time for a thread yet because of boarding soon... coming soon)

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Combinatorial control of Pseudomonas aeruginosa biofilm development by quorum-sensing and nutrient-sensing regulators

#mSystemsJ from @sampritilab.bsky.social
with Chris Waters

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Bacillus subtilis-derived peptides disrupt quorum sensing and biofilm assembly in multidrug-resistant Staphylococcus aureus
-in #mSystemsJ
journals.asm.org/doi/10.1128/...

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Metapresence: a tool for accurate species detection in metagenomics based on the genome-wide distribution of mapping reads | mSystems Despite the prevalent use of genome-centric alignment-based methods to characterize microbial community composition, there lacks a standardized approach for accurately identifying the species within a sample. Currently, arbitrary relative abundance ...

Metapresence: a tool for accurate species detection in metagenomics based on the genome-wide distribution of mapping reads
#mSystemsJ by Davide Sanguineti, Laura Treu, Guido Zampieri, and Stefano Campanaro
journals.asm.org/doi/10.1128/...

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Metagenomic clustering links specific metabolic functions to globally relevant ecosystems
#mSystemsJ
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Physiology, fast and slow: bacterial response to variable resource stoichiometry and dilution rate
-in #mSystemsJ
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Dynamics of the viral community on the surface of a French smear-ripened cheese during maturation and persistence across production years

-in #mSystemsJ

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A simple BLASTn-based approach generates novel insights into the regulation and biological function of type I toxin-antitoxins

#mSystemsJ from Elizabeth Fozo

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Microbial diversity, genomics, and phage–host interactions of cyanobacterial harmful algal blooms

#mSystemsJ by Lauren Krausfeldt et al

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Drought-induced assembly of rhizosphere mycobiomes shows beneficial effects on plant growth

-in #mSystemsJ

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Auxin-mediated regulation of susceptibility to toxic metabolites, c-di-GMP levels, and phage infection in the rhizobacterium Serratia plymuthica

#mSystemsJ from Miguel Matilla with #KrellLaboratory

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Genome-wide CRISPRi screens for high-throughput fitness quantification and identification of determinants for dalbavancin susceptibility in Staphylococcus aureus

#mSystemsJ from @mortenkj.bsky.social and @jwveening.bsky.social eening

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Expanded trade: tripartite interactions in the mycorrhizosphere

#mSystemsJ Mini-Review

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The hallmarks of a tradeoff in transcriptomes that balances stress and growth functions

#mSystemsJ from Bernhard Palsson

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