Latest posts tagged with #spatialLIBD on Bluesky
Screenshot from spatial LIBD web-app for exploring ERC SRT data
This ERC SRT and snRNA-seq data is available to explore via our interactive websites research.libd.org/LFF_spatial_ERC/ and available for download via #spatialLIBD 💻 🔓 #opendata
Three representative SRT ERC samples, showing histology, expression of marker genes MBP, PCP4, and SNAP25, and spatial domains
We used #Visium to generate the FIRST spatial transcriptomics dataset of the human #entorhinal cortex. By profiling gene expression across ERC layers with #BayesSpace and #spatialLIBD we uncovered gene expression patterns that could be useful in #Alzheimers research 🧠
New blog post: Initial impressions from testing Posit Connect
lcolladotor.github.io/2025/03/14/i...
I describe our use case and why I think that Posit Connect will be helpful for our @lieberinstitute.bsky.social work moving forward
@posit.co #RStats #shiny #shinyapps #spatialLIBD #iSEE
I'm excited to present tomorrow about #spatialLIBD and the analysis of spatially-resolved transcriptomics #Visium data with #rstats & #Bioconductor tools
Thanks for inviting me #FLGenomics!
Check 👀 the slides here 👇🏽
speakerdeck.com/lcolladotor/...
#LieberInstitute #jhubiostat #10xGenomics
Check out the updates to #spatialLIBD that Nick-Eagles @github.com introduced to the latest version available from #Bioconductor 3.19 release
Visualize multiple genes with the #spatialLIBD::vis_gene() family of functions
research.libd.org/spatialLIBD/...
#rstats
youtu.be/_dBPZ62t40c
¡Felicidades Keri @martinowk.bsky.social!
The #spatialLIBD team has benefited a lot from your ideas, orchestration, insights, leadership, & support!
Also many at LIBD have benefited from your role as Head of Education & Training Programs
Thx Keri! Kudos to you! 👏🏽
www.youtube.com/watch?v=wcRP...
