#Hubmap

Common Fund Data Ecosystem Knowledge Center

@cfdekc.bsky.social

2 months ago

Welcome! You are invited to join a meeting: HuBMAP January 2026 Portal Workshop. After registering, you will receive a confirmation email about joining the meeting. Welcome! You are invited to join a meeting: HuBMAP January 2026 Portal Workshop. After registering, you will receive a confirmation email about joining the meeting.

Mark your calendars for the #HuBMAP Workshop on Jan 29th!
💻Hands-on intro to the HuBMAP Data Portal: ASCT+B tables, spatial & single-cell data, visualizations, downloads, and in-place analysis with Workspaces.
Apply by Jan 22 👉 cmu.zoom.us/meeting/regi...

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Nautilus Biotechnology

@nautilus.bio

9 months ago

Spatial Proteomics with Fiona Ginty Ph.D. - Translating Proteomics Parag Mallick interviews spatial proteomics pioneer Fiona Ginty Ph.D. on the Translating Proteomics podcast.

On the #TranslatingProteomics #podcast, #spatialProteomics pioneer Fiona Ginty explains why she's excited about the Human BioMolecular Atlas Program or HuBMAP, a multimodal exploration of human tissues.

www.youtube.com/watch?v=xdDO...

#Proteomics #Biology #HuBMAP #Pathology #SingleCell #HuBMAP

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CNS Center

@cnscenter.bsky.social

10 months ago

Sidhartha Goyal (U Toronto) on Competition across scales in biology in the Human Atlas Methods session.
📺 youtu.be/Bz7gRTYPiM8?...
YT Playlist: youtube.com/@CNSCenter/p...

#MultiscaleHuman #HRA #CNS #Teamwork #Collaboration #Biomed #HumanPhysiology #CIFAR #Research #HuBMAP

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CNS Center

@cnscenter.bsky.social

10 months ago

Hour 14 (1AM) of the 24hr Human Atlas event 🎥 Catch the talks by Mark Musen & Andrea Radtke now on CNS’s YouTube! ▶️ youtu.be/grAb0TIh4PI
Full playlist: youtube.com/@CNSCenter/p...
#Ontologies #CNS #HRA #HuBMAP #CIFAR #biomed #research

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Hao Yin

@haoyin.bsky.social

10 months ago

HuBMAPR

R package to retrieve data from #HumanBioMolecularAtlasProgram #HuBMAP
"Ancestor & descendant records for the donor, sample, and dataset"

bioconductor.org/packages/HuB...

#BioinfoAdv 2025
academic.oup.com/bioinformati...

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Hao Yin

@haoyin.bsky.social

11 months ago

#HumanBioMolecularAtlasProgram #HuBMAP
3D #HumanReferenceAtlas

#CommonCoordinateFramework for multiscale🧍molecular anatomy

Cell type➡️
Neighborhood➡️
Community➡️
Functional tissue unit

Dataset
>800 Kidney
0 #SkeletalMuscle🥲

@naturemethods.bsky.social 2025
portal.hubmapconsortium.org

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CNS Center

@cnscenter.bsky.social

1 year ago

Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage - Nature Methods This Resource describes data, code and tools developed for the Human Reference Atlas and the Human BioMolecular Atlas Program for building and navigating a multiscale human atlas.

🧬Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage🔗Read the full study: www.nature.com/articles/s41...
#HuBMAP #3DHumanAtlas Yashvardhan Jain, Bruce Herr
@bherr2.bsky.social @katyborner.bsky.social Katy Börner, Griffin Weber, Andreas Bueckle

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CNS Center

@cnscenter.bsky.social

1 year ago

Looking for a new imaging dataset for your project? Checkout this curated dataset containing histology images from five organs for functional tissue unit segmentation on Kaggle Dataset: www.kaggle.com/datasets/yas...
www.linkedin.com/in/yashvardh...
@katyborner.bsky.social #HuBMAP

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CNS Center

@cnscenter.bsky.social

1 year ago

9PM-Multiscale Models youtu.be/ysEYj0TA9l4?... Filipi N. Silva talks about interactive real-time visualizations of large-scale networks and embeddings using Helios-Web. Moderator: @katyborner.bsky.social Katy Börner, Indiana University #MultiscleHuman #humanreferenceatlas #CIFAR #HuBMAP #Helios-Web

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CNS Center

@cnscenter.bsky.social

1 year ago

Hour5 (4PM)–Collective Intelligence of the Body
Moderator: @katyborner.bsky.social
Speaker: @drmichaellevin.bsky.social
Michael Levin youtube.com/watch?v=hsBA... More: humanatlas.io/events/2024-... #MultiscaleHuman #HumanReferenceAtlas #Biomedicine #Morphogenesis #Cells #Hubmap #NIH

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CNS Center

@cnscenter.bsky.social

1 year ago

CNS Demo Day! The CNS Team is growing and looking for more, check out our page cns.iu.edu to find jobs, our publications, videos and more. @katyborner.bsky.social @bherr2.bsky.social #CNS #Datavisualization #HumanReferenceAtlas #HuBMAP #CIFAR #jointheteam

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That guy from that one meeting

@joshwithouthats.bsky.social

1 year ago

I had never heard of this before today. This is amazing 🤯 #science #scienceiscool #HuBMAP

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Posts tagged #Hubmap