The #Nextflow Run training by @seqera.io is well underway in San Francisco, with participants learning how to run reproducible data analysis workflows at scale.📈
0
0
1
0
#Nextflow
Latest posts tagged with #Nextflow on Bluesky
Trending
#Ukraine Conflict
#U.S. Foreign Policy
#F1
#Chinese Grand Prix
#SNL
#Venezuela Baseball
#AEW Collision
#Six Nations
#Newcastle United
#Arsenal vs Everton
#Ukraine Conflict
#U.S. Foreign Policy
#F1
#Chinese Grand Prix
#SNL
#Venezuela Baseball
#AEW Collision
#Six Nations
#Newcastle United
#Arsenal vs Everton
Posts tagged #Nextflow
Announcing a #job offer in my lab (A2S-CIIMAR, Porto, Portugal) for a higher technician within my project, initMAPAfish that aims to create an open database of microbiome species present in fish species relevant for Portuguese aquaculture.
We are looking for someone with #bioinformatics […]
0
0
0
0
Tech stack: #Nextflow DSL2 | Python (statsmodels + joblib) | SQLite | Plotly Dash. Live GCAT demo 👉 polygenie.igtp.cat
Feedback welcome! #PheWAS #PRS #Bioinformatics #Genomics #openscience
0
0
0
0
Van a hacer un ciclo de conferencias en mi máster, al que no puedo ir por otros motivos, y me hace gracia que le vayan a dedicar 2 horas a #Nextflow, un programa que llevaré usando como cuatro años y literalmente usé para uno de los trabajos que tenía que entregar.
1
0
0
0
My next obsession: workflow managers 🎈Yesterday night I binged videos from #riffomonas about #reproducible research. He used #snakemake , it looks nice! I also looked up #nextflow It looks fierce! So which one to learn?
Any advice? I'll use it for #bioinformatics #pipeline s; I mainly write in #R
1
0
1
0
We've been working really hard on a refresh of the super popular #Nextflow training materials.
@geraldinevda.bsky.social has rewritten much of #Hello #Nextflow and #Nextflow #Run and I'm in the process of recording new videos 📹📼🎞️
0
0
1
0
Reducing haystacks to needles - ViralClust: A #Nextflow pipeline to cluster viral sequences www.biorxiv.org/content/10.6... 🧬💻🧪 github.com/rnajena/vira...
4
1
0
0
Next month, @ewels.bsky.social (Product Manager for OSS at @seqera.io)will be joining the Bioinformatics CRO webinar series to discuss #Nextflow, @nf-co.re, and exciting new features for reproducible bioinformatics at scale. 👇
hubs.la/Q040__J00
5
4
0
0
🧑💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing?
Please join the 🌍🌎 Eur/M.E./Afr/Americas weekly helpdesk.
Please join our nf-core maintainer Evangelos Karatzas, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
0
1
0
0
🧑💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing?
Please join the 🌍🌎 Eur/M.E./Afr/Americas weekly helpdesk.
Please join our nf-core maintainer @rikehanssen.bsky.social, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
1
0
0
0
MobiCT: a UMI-based circulating tumor DNA analysis pipeline. #UMIs #cfDNA #Nextflow #Bioinformatics #Genomics #NARgenomicsAndBioinformatics 🧪🧬 🖥️
academic.oup.com/nargab/artic...
1
0
0
0
New #Nextflow #Podcast is out! 🎙️
It's been a while..! 😅 Had a lot of fun looking back at 2025, so much happened..
Stay tuned for more podcast episodes in 2026, hoping to get back to a more regular cadence again 🙂
2
0
0
0
Está mal que yo lo diga, pero el pipeline de #Nextflow que estoy haciendo está quedando bonito. Eso sí, tengo al portátil viejo en plan FUUUUUUU de tanto ventilador.
Sorpresa: los datos que seleccioné para hacer una simulación de artículo y póster apenas me han dado resultados 🙃.
0
0
0
0
Check out the recent lakeFS blog post showcasing how
@cytoreason.bsky.social have utilized #Nextflow and #lakeFS to treat their disease models as versioned, reproducible data products.🦠 The result: a release cycle that's faster, cleaner, and more reproducible. hubs.la/Q03_5ynF0
0
0
0
0
Me he creado un pipeline de #Nextflow para una asignatura, que luego usaré para futuros trabajos si tengo que lucirme, que pilla FASTQ del repositorio GEO y termina haciendo análisis básicos y un informe. Pues bien, resulta que me funciona para todo menos para los FASTQ que quiero descargarme.
0
0
1
0
That little push you needed to start learning not only basic #Nextflow, but also advanced skills and new features. 😉
1
0
0
0
Next #Nextflow training week coming soon!
We're hoping to have brand new fresh material ready, including updated Nextflow syntax. Should make for a great refresher even if you've dabbled in Nextflow before!
Sign up for free to be notified when it's ready and get help as you progress 📆🧑🎓
0
0
0
0
New Post: Your first production-grade pipeline (with a @nextflow.io example). A minimal definition + practical hardening steps (profiles, observability, smoke tests, versioning) with a runnable template!
#Bioinformatics #Nextflow #Reproducibility #ResearchSoftware
1
1
0
0
🧬 Incredibly Exciting New NGS Data Analysis Workshops for 2026 - 🌐 www.ecseq.com
#NGS #VariantCalling #Illumina #singleCell #nextflow #bisulfiteseq #RNAseq #DNAseq @10xgenomics.bsky.social @nextflow.io
0
0
0
0
Workflow map of the venae pipeline https://github.com/phac-nml/venae
We built venae, a pipeline written in #Nextflow, which removes host reads, assess quality, identifies species, performs assembly, detects #AMR genes, and runs species-specific typing
🧵3/4
github.com/phac-nml/venae
0
0
1
0
Slide containing text: Meta-*omics Nextflow pipeline community exhibition day Organised by James Fellows Yates Supported by NFDI4Microbiota, Nextflow Ambassador program, and deNBI
🎉 Huge shout out to everyone who instructed and participated in yesterday's online Meta-*omics #Nextflow Pipeline Community Exhibition Day!
🧑🏫 Over 9 hours, we had 15 different pipelines demo'd by their lead developers, and giving an international cohort of […]
[Original post on genomic.social]
5
2
1
0
David Condon just released a #NextFlow/ #snakemame pipeline/logger alternative in #Perl:
metacpan.org/pod/SimpleFlow
which should make debugging and running very complex #pipelines much easier.
2
0
0
0
David Condon just released a #NextFlow/ #snakemame pipeline/logger alternative in #Perl:
https://metacpan.org/pod/SimpleFlow
which should make debugging and running very complex #pipelines much easier.
0
0
0
0
David Condon just released a #NextFlow/ #snakemame pipeline/logger alternative in #Perl:
https://metacpan.org/pod/SimpleFlow
which should make debugging and running very complex #pipelines much easier.
0
0
0
0
🧑💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing?
We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk.
Please join our nf-core maintainers, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
1
1
0
0
#Observability + #AI: a surprisingly helpful combination. Leverage improved observability in #genomics workflows to delegate initial troubleshooting tasks to an AI agent! #Slurm #Nextflow #OpenAI #Python #Loki #Slack jeffjjohnston.github.io/2025/11/30/o...
1
0
0
0
I posted earlier about a new plugin for #NodeRED that allows you to create complex #Nextflow automations using Seqera Platform.
I made a much sillier demo using #HomeAssistant to control my lights and have a #pipeline #party. Oh, and also play #DOOM 👀 🪩 🚨 🕺🏻
Enjoy 🎉
www.youtube.com/watch?v=qt_u...
2
0
1
0
🧑💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing?
We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk.
Please join our host @vagkaratzas.bsky.social, nf-core maintainer, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
3
2
0
0