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Latest posts tagged with #QTL on Bluesky

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Posts tagged #QTL

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Genome-wide association study reveals #genomic regions for #nitrogen, #phosphorus and #potassium use efficiency in bread #wheat
🌟🌈☀️ doi.org/10.1016/j.ji...

✏️Jili Xu et al. #PlantScience #NUE #QTL #GWAS

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Published in Horticulture Research, the study combines high-coverage whole-genome sequencing of parental cultivars with low-coverage sequencing of offspring to map genetic regions controlling flowering, ripening, and productivity across multiple years.
#QTL
Details: doi.org/10.1093/hr/u...

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In a study published in Horticulture Research, scientists investigated the genetic basis of prostrate growth habit in chrysanthemum using interspecific hybrids between a creeping wild species and an erect relative.
#QTL detection #chrysanthemum
Details:https://doi.org/10.1093/hr/uhaf129

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Huge thanks to co-first author Kevin Currin, my PIs @klmohlke.bsky.social & Terry Furey and the entire team!

This dataset is now a public resource for anyone studying liver biology and complex traits. #Genetics #QTL #Liver #Multiome #AJHG

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A deep dive into statistical modeling of RNA splicing QTLs reveals variants that explain neurodegenerative disease Current methods for detecting splicing quantitative trait loci (sQTLs) miss many disease-associated genetic variants. MAJIQTL introduces improved statistical modeling and comprehensive splicing repres...

#3: Last but not least, we released a new method for splicing #QTL which uses #MAJIQ under the hood but then adds new statistical modeling. The new MAJIQTL results in major power increase (can be > 2 fold in some cases) with improved control over false positives. www.cell.com/ajhg/fulltex...

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#Genome-wide association studies of novel resilience traits identify important #immune #QTL regions and candidate #genes in #Duroc #pigs
✅Prof. Lixian Wang team from CAAS & Prof. @david_machugh from University College Dublin
✅doi.org/10.1016/j.jia.2024.04.017
#animalscience

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#Genome-wide association studies of novel resilience traits identify important #immune #QTL regions and candidate #genes in #Duroc #pigs
✅Prof. Lixian Wang team from CAAS & Prof. David Machugh from University College Dublin
✅doi.org/10.1016/j.jia.2024.04.017
#animalscience

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#Fhb9, a major #QTL for #Fusarium head blight resistance improvement in #wheat
🌱Academician Qixin Sun team from China Agricultural University
🔍https://doi.org/10.1016/j.jia.2024.03.045
⚪️https://mp.weixin.qq.com/s/NK0-kHHeZAbc4cvzuphpiw
#plantsci

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@leonardo-caproni.bsky.social just presented our research on time-resolved #QTL mapping at the #EPPS workshop - linking photosynthetic efficiency to maize growth dynamics. Great discussions on #phenotyping in controlled environments! 🚀🚀🚀

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Hello world from the 68th congress of the Italian Society of Agricultural Genetics! Kudos to Martina and Godman for the great job presenting their work on maize genomics and sorghum-striga interaction #crop #QTL #GWAS @leonardo-caproni.bsky.social @mdellacq.bsky.social

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More 🌽🌽 research—Mingliang Xu from China Agricultural University on quantitative resistance in #maize, and the calcium-dependent protein #kinase #QTL

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Frontiers | Dissecting the genetic basis of bioactive metabolites and fruit quality traits in blueberries (Vaccinium corymbosum L.) Blueberry is well-recognized as a healthy fruit with functionality derived largely from anthocyanin and chlorogenic acid. Despite their importance, no study ...

Dissecting the genetic basis of bioactive metabolites and fruit quality traits in blueberries (Vaccinium corymbosum L.)
doi.org/10.3389/fpls...

#Flavonoid #BlueBerry #Biochemistry #QTL #GWAS #CropGenetics

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Fine mapping and candidate #gene analysis of a major #QTL for #grain length on chromosome 5BS in #bread #wheat
✏️Prof. Yong Zhang team from Institute of Crop Sciences, CAAS
🌾https://doi.org/10.1016/j.jia.2024.04.033
#crops #plantsci #molecularbiology

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In the journal Horticulture Research, researchers integrated QTL mapping with transcriptomics to uncover 24 sterol-related QTLs and identified BnSQS1.C03 as a pivotal gene influencing both sterol and oil content.
#Total sterol #QTL
Details: doi.org/10.1093/hr/u...

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Prof. Mengjun Liu team from Hebei Agricultural University conducted 📃transcriptome-based analysis of #lignin accumulation in the regulation of #fruit stone development and endocarp hardening in #Chinese #jujube
🟢https://doi.org/10.1016/j.jia.2024.12.032
#horticulture #plantscience #QTL

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#QTL detection and candidate #gene analysis of the anthracnose resistance locus in #tea plant (Camellia sinensis)
🟢https://doi.org/10.1016/j.jia.2025.02.015
⚪️https://short-link.me/166fU
#plantscience #horticulture

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In the journal Horticulture Research, researchers measured sugars (glucose, fructose, sorbitol) and acids (malic, quinic) over two years, identifying 20 stable quantitative trait loci (QTLs).
#Sweet cherry #QTL
Details: doi.org/10.1093/hr/u...

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Genetic Modulation of Lifespan: Dynamic Effects, Sex Differences, and Body Weight Trade-offs The dynamics of lifespan are shaped by DNA variants that exert effects at different ages. We have mapped genetic loci that modulate age-specific mortality using a new actuarial method. We started with...

Finally online 🥳, the largest #QTL study ever done in mice, we use an actuarial approach to map #genetic factors affecting #aging in mice (Vita) and discover that genetics modulates the effect of #bodyweight on #lifespan (Soma).

www.biorxiv.org/content/10.1...

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A Deep Dive into sQTL Modeling – Part 2 In my previous post, I described how, in our recent sQTL preprint, we broke current sQTL pipelines into their basic elements. This led to identifying potential issues/areas we may be able to improv…

📣 Our 2nd Blog post on improving #sQTL modeling and why it matters #RNASplicing #Genetics #Statistics #QTL biociphers.wordpress.com/2025/01/28/a...

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Tuesday morning at the Workshop on Population and Speciation Genomics starts with a fun activity on #QTL mapping of chocolate traits, part of Katie Peichel’s lecture on Genomics of #Adaptation

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Working on an interview project identifying KRIs in the OAI data set. Any #rstats people have suggestions on packages or functions to try?

I'm about one year into learning to program, so everything is fail forward right now 🌅.
#rbm #csm #kri #qtl

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ICYMI🧬🌿

Incorporating a Dynamic Gene-Based Process Module into a Crop Simulation Model

@UF_ABE @Bayer4CropsUS @IFDCnews @embrapa @UniversidadeUPF #QTL #genetics #cropmodel

#OpenAccess 👉🏾 https://bit.ly/3jNVJmp

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Transforming crop simulation models into gene-based models

@UF_ABE @Bayer4CropsUS @IFDCnews @embrapa @UniversidadeUPF #QTL #genetics #cropmodel

🔬 #OpenAccess research: https://doi.org/10.1093/insilicoplants/diab011
📰Story: https://bit.ly/3OyNXaU from @botanyone

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Dissecting durum #wheat time to anthesis into physiological traits using a QTL-based model

#physiology #QTL

https://bit.ly/3Z5393Z via @biorxiv_plants

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Incorporating a dynamic gene-based process module into a crop simulation model

#QTL #genetics #cropmodel

https://bit.ly/3QM0B5D

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ICYMI🧬🌿

Incorporating a Dynamic Gene-Based Process Module into a Crop Simulation Model

@UF_ABE @Bayer4CropsUS @IFDCnews @embrapa @UniversidadeUPF #QTL #genetics #cropmodel

#OpenAccess 👉🏾 https://bit.ly/3o0gZVs

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Transforming crop simulation models into gene-based models

@UF_ABE @Bayer4CropsUS @IFDCnews @embrapa @UniversidadeUPF #QTL #genetics #cropmodel

🔬 #OpenAccess research: https://doi.org/10.1093/insilicoplants/diab011
📰Story: https://bit.ly/3kASwUN from @botanyone

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Incorporating a dynamic gene-based process module into a crop simulation model - predicting phenotype using only #QTL and weather information

@UF_ABE @Bayer4CropsUS @IFDCnews @embrapa @UniversidadeUPF #QTL #genetics #cropmodel

#OpenAccess 👉🏾...

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|| ICYMI ||

Incorporating a Dynamic Gene-Based Process Module into a Crop Simulation Model

@UF_ABE @Bayer4CropsUS @IFDCnews @embrapa @UniversidadeUPF #QTL #genetics #cropmodel

#OpenAccess 👉🏾 https://bit.ly/3jQ3Ude

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|| NEW ||

Incorporating a Dynamic Gene-Based Process Module into a Crop Simulation Model

@UF_ABE @Bayer4CropsUS @IFDCnews @embrapa @UniversidadeUPF #QTL #genetics #cropmodel

#OpenAccess 👉🏾 https://bit.ly/2Zhmfq7

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