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Posts tagged #atacseq

Need help! The most cost effective sequencing service for ready libraries for single-cell ATAC-seq? Share your best tips! Have money, just not lots of it. #sequencing #singlecell #atacseq

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Our expansion of single-cell epigenetics assays continues!

The Epigenome Technologies scCUT&Tag assay is now compatible with the BD Rhapsody platform

Learn more here: bit.ly/4lquJDv

#Epigenetics #BDrhapsody #CUTandTag #Chromatin #Multiomics #Singlecell #CUTandRUN #ChIPseq #ATACseq

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Our expansion of single-cell epigenetics assays continues!

The Epigenome Technologies scCUT&Tag assay is now compatible with the BD Rhapsody platform

Learn more here: bit.ly/4lquJDv

#Epigenetics #BDrhapsody #CUTandTag #Chromatin #Multiomics #Singlecell #CUTandRUN #ChIPseq #ATACseq

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Fiber-seq 101: A Multiomic Assay That Goes Beyond ATAC-seq - EpiCypher Fiber-seq is a powerful new long-read sequencing assay to simultaneously study genetic and epigenetic features. Read more!

How can you profile chromatin accessibility, DNA methylation, and protein footprints in a single assay?

🔗 Read more: https://www.epicypher.com/resources/blog/fiber-seq-101/

#Epigenomics #Chromatin #ATACseq #Multiomics #Fiberseq #EpiCypher

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🎧 In this episode of the Epigenetics Podcast, we talked with Will (Yu Xin) Wang from Sanford Burnham Prebys about his work on muscle stem cell repair, regeneration, and aging, exploring spatial-omics and machine learning.

Listen here: bit.ly/4bkng7p
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#podcast #ActiveMotif #ATACSeq

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👀🚨 You don't want to miss this eBook: Spike-In Normalization – Complete Guide 📥 Download now: bit.ly/4szJLLt

Don't miss out on a complete resource for normalization of assay data sets.

📚 Discover more eBooks: bit.ly/4juZdo6
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#Chromatin #Epigenetics #ChIPseq #ATACseq #CUTandRUN #ActiveMotif

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Our expansion of single-cell epigenetics assays continues!

The Epigenome Technologies scCUT&Tag assay is now compatible with the BD Rhapsody platform

Learn more here: bit.ly/4lquJDv

#Epigenetics #BDrhapsody #CUTandTag #Chromatin #Multiomics #Singlecell #CUTandRUN #ChIPseq #ATACseq

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Our expansion of single-cell epigenetics assays continues!

The Epigenome Technologies scCUT&Tag assay is now compatible with the BD Rhapsody platform

Learn more here: lnkd.in/g3YqPrWY

#Epigenetics #BDrhapsody #CUTandTag #Chromatin #Multiomics #Singlecell #CUTandRUN #ChIPseq #ATACseq

2 1 0 0
Post image

Our expansion of single-cell epigenetics assays continues!

The Epigenome Technologies scCUT&Tag assay is now compatible with the BD Rhapsody platform

Learn more here: bit.ly/4lquJDv

#Epigenetics #BDrhapsody #CUTandTag #Chromatin #Multiomics #Singlecell #CUTandRUN #ChIPseq #ATACseq

1 1 0 0
Post image

Our expansion of single-cell epigenetics assays continues!
The Epigenome Technologies scCUT&Tag assay is now compatible with the BD Rhapsody platform

Learn more here: lnkd.in/g3YqPrWY

#Epigenetics #BDRhapsody #CUTandTag #Chromatin #Multiomics #SingleCell #CUTandRUN #ChIPseq #ATACseq

2 1 0 0
Post image

Our expansion of single-cell epigenetics assays continues!

The Epigenome Technologies scCUT&Tag assay is now compatible with the BD Rhapsody platform

Learn more here: lnkd.in/g3YqPrWY

#epigenetics #BDrhapsody #CUTandTag #Chromatin #multiomics #singlecell #CUTandRUN #ChIPseq #ATACseq

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ShortCake: An integrated platform for efficient and reproducible single-cell analysis. #SingleCell #RNAseq #ATACseq #Docker #Bioinformatics #Genomics
academic.oup.com/bioinformati...

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Robust footprinting with sample-specific Tn5 bias correction for bulk and single cell ATAC-seq Footprint analysis of assay for transposase-accessible chromatin via sequencing (ATAC-seq) enables base resolution mapping of regulatory elements but is often underpowered and prone to false positives...

Sharper footprints, cleaner insights? Yuxuan Lin at the University of Pennsylvania explores a new approach that corrects Tn5 bias for bulk & single-cell ATAC-seq, boosting the accuracy of transcription-factor binding 🔬
👉 www.biorxiv.org/content/10.1...
#SingleCell #Epigenomics #ATACseq

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How can you profile chromatin accessibility, DNA methylation, & protein footprints in ONE assay?

💡 In our new Fiber-seq 101 blog, we break down how this platform is transforming epigenomics.

🔗 Read more: www.epicypher.com/resources/bl...

#Epigenomics #ATACseq #Multiomics #Fiberseq

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🧬 Unlock your genome with ATAC-Seq! bit.ly/4gV8qF4 Learn how it maps chromatin & discover our end-to-end services.

Check out our Complete Guide to Understanding and Using ATAC-Seq 🔗 bit.ly/4o2IARB

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#ATACSeq #Epigenetics #Chromatin #GeneRegulation #ActiveMotif #ResearchTools

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Join us Oct. 28–30 for a Virtual ChIP-Seq / ATAC-Seq Workshop! 🧬

📅 10 AM – 2 PM EST
💻 Live on Zoom + recordings
💰 $500 ($400 UConn affiliates)

Register: bioinformatics.uconn.edu/cbc-workshops/

#ChIPSeq #ATACSeq #Bioinformatics #Workshop

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Quality control of single-cell ATAC-seq data without peak calling using Chromap. #QC #ATACseq #Bioinformatics @biorxiv-bioinfo.bsky.social
www.biorxiv.org/content/10.1...

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Single-cell chromatin accessibility profiling reveals regulatory mechanisms and evolution in pig brains - BMC Biology Background Pig brains serve as a valuable biomedical model for studying brain-related diseases due to their significant structural similarities to the human brain. Furthermore, the long-term domestica...

Single-cell chromatin accessibility profiling reveals regulatory mechanisms and evolution in pig brains

#singlecell #epigenome #transcriptome #RNAseq #ATACseq #cortex #cerebellum #oligodendroglia 🧪

bmcbiol.biomedcentral.com/articles/10....

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Great conversations and inspiring vibes at @events.embl.org — felt amazing to share my work and hear from incredible speakers!
#EESAgeing #SingleCell #Aging #ATACseq #RNAseq #Immunology #Multiomics #scRNAseq #scATACseq

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Join us for our July #webinar, where Armaan will cover an overview of #epigenetics, how to incorporate #ChIPseq, #RIPseq, #ATACseq, #EMseq and DNA #methylation in your own epigenetics projects.

Register here: bit.ly/4e25SUe

#novogene #nextgenerationsequencing #ngs

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a pleasure to run the hands-on training at Faculté de Pharmacie de Paris with Jessica Apulei !

Interested to organize an on-site EpiWorkshop for your lab/institute? contact me!

#EpiWorkshops #Epigenomics #ATACseq @diagenode.bsky.social

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Using data from a #spider and an #ant, we conclude that fresh samples are best, but cell culture medium preservation and to a lesser degree flash frozen tissue are good alternatives. We offer step-by-step advice for novices to #ATACseq emphasizing the importance of quality control at every stage.

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ATAC‐seq in Emerging Model Organisms: Challenges and Strategies Principle of ATAC-seq (left), overview of arthropod species with published ATAC-seq data (middle), summary of experimental design (right).

You want to apply #ATACseq in your emerging model organism, but you don't know where to start? Is #ATACseq the best method for my research questions? Search no more! We got you covered with our new review: doi.org/10.1002/jez.... Excellent collaboration with @gevol.bsky.social

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A new @NARCancer study shows ECM stiffness drives prostate cancer aggression 😱—with softer ECM boosting androgen response 💪. ECM isn’t just a structure; it also acts as a signal. Read the full article here: doi.org/10.1093/narc... #ProstateCancer #ECM #NARCancer #ATACseq #RNAseq @uniuef.bsky.social

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Training course dates and topics as per link

Training course dates and topics as per link

Check out our #TrainingTuesday #Bioinformatics and #statistics training opportunities
www.bioinformatics.babraham.ac.uk/training.html
We have #ChIPSeq and #ATACSeq data analysis training coming up! #ComputationalBiology #ResearchScientce #ECR #PhD

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Join tomorrow's Epicafé session:

· DNA-methylation: compare EPIC, MMA and MSA
· ideal ATAC-seq libraries
· new Ultra-Fast Protocol on Megaruptor 3

Register: go.diagenode.com/epicafe

Connect with fellow enthusiasts in the field of epigenomics!🧬

#Epigenomics #InfiniumArray #ATACseq #Megaruptor3

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RXRα as a key transcription factor in adaptive repair after #AKI? New #ATACseq study in @natcomms 👇https://rdcu.be/c0zRX

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