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Posts tagged #molecularevolution

Graph showing the SUMSTAT statistic for different organs or tissues, colored by system. Values from the Nervous and Male reproductive systems have the highest values, while all others are quite similar.

Graph showing the SUMSTAT statistic for different organs or tissues, colored by system. Values from the Nervous and Male reproductive systems have the highest values, while all others are quite similar.

Here this sum over organs/tissues shows a strong excess of positive selection on regulatory sequences in human nervous system evolution 😎. And to a lesser extent in male reproductive system. #MolecularEvolution #EvoDevo

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Congratulations to @nextstrain for this great paper! Studying the evolution of moulting beyond insects has been challenging, and we are starting to see how moulting is both deeply conserved and evolving differently in pancrustacean lineages. #EvoDevo #ArthropodEvolution #MolecularEvolution

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Published by: Xun Gu 📅 Published on: June 17, 2021 📄 Full Study: [DOI: 10.1007/s43657-021-00013-2] 🔗

#Genetics #EvolutionaryTheory #MolecularEvolution #PopulationGenetics #MutationPenetrance #ScientificBreakthrough

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🎊 Happy Friday! We're excited to share the perfect weekend read: Hidden Gems 🌅

👇 We invite you to revisit these gems and let us know your favourites!

2024 ➡️ buff.ly/M03pJvd

2025 ➡️ buff.ly/WoaPdef

#researchhighlights #neuronalregeneration #structuralbiology #molecularevolution

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Balancing selection alert!! 🧬🧪

New preprint where we try to quantify how likely (or rather, unlikely) it is for balancing selection to maintain stable polymorphism, and how easy (or rather, challenging) it is to identify its signatures in genomes.

#Popgen #MolecularEvolution #EvoBio #Science

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The next step in a great scientific adventure led by Marina Brasó Vives on amphioxus evolution: population genomics of a species with 3% heterozygosity! Read the thread and the preprint 😁 #amphioxus #EvoDevo #PopulationGenomics #MolecularEvolution

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Delighted to be joining MBE as an Associate Editor! Looking forward to being part of such a strong editorial team! #phylogenomics #MolecularEvolution #genomics

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New Glowing Molecule, Invented By AI, Would Have Taken 500 Million Years To Evolve In Nature, Scientists Say EvolutionaryScale An artificial intelligence (AI) model has simulated half a billion years of molecular evolution to create the code for a previously unknown protein, according to a new study. The …

New Glowing Molecule, Invented By AI, Would Have Taken 500 Million Years To Evolve In Natureonlinemarketingscoops.com/2025/12/12/new-glowing-m...
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#MolecularEvolution #MolecularBiology #EvolutionaryBiology #DNA #gnome #EvolutionaryScience #research #science #biology

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A new theory of molecular evolution

A new theory of molecular evolution

A new theory of molecular evolution
#evolutionsoup #evolution #molecularevolution #science #fossils
👇🏿👇🏽
is.gd/AEgCMT

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Molecular determinants underlying functional divergence of TBP homologs The TATA-box binding protein (TBP) is a highly conserved basal transcription factor and a core component of the pre-initiation complex (PIC) for all three eukaryotic RNA polymerases (RNA Pols). Despit...

How does a “universal” transcription factor evolve to do species-specific jobs?
Our new preprint reveals how divergence in TBP’s domains shapes transcriptional specialization across eukaryotes.

Read it here 👉

www.biorxiv.org/content/10.1...

#MolecularEvolution #Transcription

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There is much more to this story. Thank you for a fascinating and very thought-provoking podcast #prebiotic #OriginOfLife #MolecularEvolution

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Original post on ecoevo.social

Update of our preprint on Inter-individual gene expression variability in fishes! We improved statistical analyses of continuous variables, and especially added machine learning on promoters which confirms cis-regulation of organ-specific expression variability, under stronger sequence […]

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#DNApolymerase #PolX #GenomeDynamics #Paramecium #Ciliates #DNArepair #GenomeRearrangements #MolecularEvolution #OpenAccess #Science
@narjournal.bsky.social @sorbonne-universite.fr @ipdbsc.bsky.social @pasteur.fr

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Original post on ecoevo.social

Starting #ESEB2025 a bit late, with an exciting symposium on whole genome duplication. They couldn’t fit all of the talks in, I’ll be talking on “Gene expression variability and evolutionary outcomes after whole-genome duplication in fishes” tomorrow in the Genetics symposium. #GeneDuplication […]

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🔍 Measuring how fast expression evolves opens a path to understanding how organisms evolve—not just what evolves.
This is just the beginning: from single genes to networks, expression clocks can help decode the tempo of evolution.

doi.org/10.1093/molb...

#MolecularEvolution #GeneExpression #MBE

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Poster for the “Molecular Origins of Life 2025” online conference, held July 16–18, 2025. The vibrant artwork by Priyanka Oberoi features an abstract early Earth scene: volcanic landscapes, DNA, molecules, and a rainbow prism bursting from a cracked sphere, symbolizing the emergence of life. Lightning bolts and suns add dynamic energy. A QR code links to www.lmu.de/mom2025. At the bottom, the list of invited speakers is shown in colorful text: Donna Blackmond, Jasna Brujic, Irene Chen, Daniel Duzdevich, Kosuke Fujishima, Paul Higgs, Marcel Hollenstein, Philipp Holliger, Frieder Klein, Corinna Kupfer, Sergei Maslov, Ulrich Müller, Arvind Murugan, Henrike Niederholtmeyer, Takumi Okuda, Matthew Pasek, Alexey Potapov, James Saenz, Anja Spang, Dora Tang, Zoe Todd, Yuichiro Ueno

Poster for the “Molecular Origins of Life 2025” online conference, held July 16–18, 2025. The vibrant artwork by Priyanka Oberoi features an abstract early Earth scene: volcanic landscapes, DNA, molecules, and a rainbow prism bursting from a cracked sphere, symbolizing the emergence of life. Lightning bolts and suns add dynamic energy. A QR code links to www.lmu.de/mom2025. At the bottom, the list of invited speakers is shown in colorful text: Donna Blackmond, Jasna Brujic, Irene Chen, Daniel Duzdevich, Kosuke Fujishima, Paul Higgs, Marcel Hollenstein, Philipp Holliger, Frieder Klein, Corinna Kupfer, Sergei Maslov, Ulrich Müller, Arvind Murugan, Henrike Niederholtmeyer, Takumi Okuda, Matthew Pasek, Alexey Potapov, James Saenz, Anja Spang, Dora Tang, Zoe Todd, Yuichiro Ueno

🧠 Great ideas take time.

That’s why the poster deadline has been extended to:
📅 July 8
💻 Online & free
🔗 Registration indico.physik.uni-muenchen.de/event/537/

Let it simmer — then bring the brilliance!

#OriginOfLife #MolecularEvolution #Conference

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Original post on ecoevo.social

Exciting work led by Giulia Zancolli on the venomless Uloboridae spiders. They lost their venom glands and venom injecting duct, but wrap their prey in toxic digestive fluids.
The paper: bmcbiol.biomedcentral.com/articles/10.1186/s12915-...
The press release (in 🇫🇷) […]

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Presenting about the importance of soil variables in local adaption in Dutch elm disease pathogens at #AQSSSSPPQ2025

#forestpathology #localadaptation #molecularevolution

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Snail venom glands - Nature Ecology & Evolution Nature Ecology & Evolution - Snail venom glands

Nice highlight of our recent work on the evolution of venom production in marine predatory snails
https://www.nature.com/articles/s41559-025-02763-y
#EvoDevo #MolecularEvolution #Venom

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Original post on ecoevo.social

You can still apply: Postdoc job opportunity! We're looking for early career researcher in evolutionary genomics to study the relation between intra-specific gene expression variability, polymorphism, and macro-evolutionary rates. We have all of the data in 3 fishes and amphioxus, just waiting […]

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If you do deep evolutionary analysis - structure-aware characters can help. To ensure correct alignments - give it a try: biosig.lab.uq.edu.au/structome_al...

If you would like any features added, drop a message and will give it a shot.

#Science #Evolution #MolecularEvolution #DeepEvolution

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Structome-AlignViewer: On Confidence Assessment in Structure-Aware Alignments Protein structure-based comparison provides a framework for uncovering deep evolutionary relationships that can escape conventional sequence-based approaches. Encoding three-dimensional protein struct...

🧵: It's out. Structome-AlignViewer, a web-based resource for evaluating protein structure-aware sequence alignments. It maps alignment columns directly onto structures and helps identify conserved regions. Feedback encouraged. www.biorxiv.org/content/10.1...

#Evolution #MolecularEvolution #Science

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🔗 Ready to analyze your codon usage? GCUA makes sophisticated codon bias analysis accessible to everyone.
#Bioinformatics #CodingSequences #CodonUsage #Python #Genomics #MolecularEvolution #SyntheticBiology #GeneExpression #Optimization

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Poster for the “Molecular Origins of Life 2025” online conference, held July 16–18, 2025. The vibrant artwork by Priyanka Oberoi features an abstract early Earth scene: volcanic landscapes, DNA, molecules, and a rainbow prism bursting from a cracked sphere, symbolizing the emergence of life. Lightning bolts and suns add dynamic energy. A QR code links to www.lmu.de/mom2025. At the bottom, the list of invited speakers is shown in colorful text: Donna Blackmond, Jasna Brujic, Irene Chen, Daniel Duzdevich, Kosuke Fujishima, Paul Higgs, Marcel Hollenstein, Philipp Holliger, Frieder Klein, Corinna Kupfer, Sergei Maslov, Ulrich Müller, Arvind Murugan, Henrike Niederholtmeyer, Takumi Okuda, Matthew Pasek, Alexey Potapov, James Saenz, Anja Spang, Dora Tang, Zoe Todd, Yuichiro Ueno

Poster for the “Molecular Origins of Life 2025” online conference, held July 16–18, 2025. The vibrant artwork by Priyanka Oberoi features an abstract early Earth scene: volcanic landscapes, DNA, molecules, and a rainbow prism bursting from a cracked sphere, symbolizing the emergence of life. Lightning bolts and suns add dynamic energy. A QR code links to www.lmu.de/mom2025. At the bottom, the list of invited speakers is shown in colorful text: Donna Blackmond, Jasna Brujic, Irene Chen, Daniel Duzdevich, Kosuke Fujishima, Paul Higgs, Marcel Hollenstein, Philipp Holliger, Frieder Klein, Corinna Kupfer, Sergei Maslov, Ulrich Müller, Arvind Murugan, Henrike Niederholtmeyer, Takumi Okuda, Matthew Pasek, Alexey Potapov, James Saenz, Anja Spang, Dora Tang, Zoe Todd, Yuichiro Ueno

Online Conference | Molecular Origins of Life – Munich 2025
Join us for talks & posters across disciplines.
📅 July 16–18
❗Poster registration deadline: 30 June
💻 Online & free
🔗 Registration is open now indico.physik.uni-muenchen.de/event/537/
#OriginOfLife #MolecularEvolution #Conference
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Original post on ecoevo.social

Postdoc job opportunity! We're looking for early career researcher in evolutionary genomics to study the relation between intra-specific gene expression variability, polymorphism, and macro-evolutionary rates. We have all of the data in 3 fishes and amphioxus, just waiting for your expertise and […]

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Nice RNAseq atlas of small but important crustacean Daphnia pulex, and study of "selection operating on genes expressed in different tissues" www.biorxiv.org/content/10.1101/2025.05.... #EvoDevo #MolecularEvolution #RNAseq #Daphnia #Crustacean

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Left: overview of the anatomy of a marine snail, with color-coded sampled tissues: salivary glands, foot, gland, oesophagus, and columellar muscle
Right: phylogeny of the marine snails used in the study, showing different gland phenotypes in different species: oesophageal gland, gland of Leiblein, no gland, and venom gland with muscular bulk

Left: overview of the anatomy of a marine snail, with color-coded sampled tissues: salivary glands, foot, gland, oesophagus, and columellar muscle Right: phylogeny of the marine snails used in the study, showing different gland phenotypes in different species: oesophageal gland, gland of Leiblein, no gland, and venom gland with muscular bulk

Great to see this out in society journal @molbioevol @officialSMBE!
Cone snails are venomous 🐚🍽️🐟 and have evolved from non venomous marine snails. We show how their venom gland evolved from homologous glands, and how this affected the evolution of their […]

[Original post on ecoevo.social]

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Is there a multiple sequence alignment that people use to construct phylogenetic trees in ugrad teaching labs with organisms that students relate to? Maybe some involving gene duplications? #molecularevolution #phylogenetics

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This is the best explanation I've ever seen for lungfish genome sizes
https://xkcd.com/3064/
#XKCD #Genomes #MolecularEvolution #lungfish

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