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Posts tagged #morphological

Phylogenetic network of extant and extinct seed plant inferred from a morphological matrix; colouring highlights groups of seed plants and their differentiation in three putative major lineages: The pan-angiosperms as descendants of the first common ancestor of flowering plants not shared with living conifers including Petriellaeales and Caytoniales, possible Bennettitales, Xadzigacalix and Gnetales. The pan-conifers as their counterpart including extant conifers and their extinct relatives (Doyleales) and possible precursors, Voltziales and Cordaitales, as well as Ginkgo. And pan-cycads for the group phenotypically close to cycads (Cycadales): Peltaspermales, Callistophytales, and Umkomasiales.

Phylogenetic network of extant and extinct seed plant inferred from a morphological matrix; colouring highlights groups of seed plants and their differentiation in three putative major lineages: The pan-angiosperms as descendants of the first common ancestor of flowering plants not shared with living conifers including Petriellaeales and Caytoniales, possible Bennettitales, Xadzigacalix and Gnetales. The pan-conifers as their counterpart including extant conifers and their extinct relatives (Doyleales) and possible precursors, Voltziales and Cordaitales, as well as Ginkgo. And pan-cycads for the group phenotypically close to cycads (Cycadales): Peltaspermales, Callistophytales, and Umkomasiales.

A Romerogram depicting contrasting hypotheses about the evolution and phylogenetic relationships between extinct and extant seed plants. Earliest precursors of seed plants include various Devonian and Mississippian (Carboniferous) progymnosperms; one group, Lyginopteridales it thought to be the stem group of all living seed plants that evolved from a shared ancestors (A) and split up into two major lineages, one including extant gymnosperms and various fossil groups associated with them ("pan-conifers"), the other ("pan-angiosperms") leading to the angiosperms (flowering plants). Alternative relationships proposed by various studies are highlighted by coloured, stippled lines such as the evolution of Glossopteridales from either the Cordaitales, a stem group of pan-conifers, or the first common ancestor of angiosperms. Angiosperms, the today dominating group of seed plants appearing in the Early Cretaceous have been linked to a broad range of groups including Gnetales (placed by molecular phylogenies in the pan-conifers), extinct Bennettitales, a group linked to either pan-conifers or pan-angiosperms, dispersed reticulate pollen found in the Triassic, and Petriellaeales, an enigmatic group of seed ferns from Lower and Middle Triassic plant fossil localities. The spindles give the (roughly estimated) diversity of each group, and the square root of extant species to the top.

A Romerogram depicting contrasting hypotheses about the evolution and phylogenetic relationships between extinct and extant seed plants. Earliest precursors of seed plants include various Devonian and Mississippian (Carboniferous) progymnosperms; one group, Lyginopteridales it thought to be the stem group of all living seed plants that evolved from a shared ancestors (A) and split up into two major lineages, one including extant gymnosperms and various fossil groups associated with them ("pan-conifers"), the other ("pan-angiosperms") leading to the angiosperms (flowering plants). Alternative relationships proposed by various studies are highlighted by coloured, stippled lines such as the evolution of Glossopteridales from either the Cordaitales, a stem group of pan-conifers, or the first common ancestor of angiosperms. Angiosperms, the today dominating group of seed plants appearing in the Early Cretaceous have been linked to a broad range of groups including Gnetales (placed by molecular phylogenies in the pan-conifers), extinct Bennettitales, a group linked to either pan-conifers or pan-angiosperms, dispersed reticulate pollen found in the Triassic, and Petriellaeales, an enigmatic group of seed ferns from Lower and Middle Triassic plant fossil localities. The spindles give the (roughly estimated) diversity of each group, and the square root of extant species to the top.

Just added a bunch of #phylogenetic matrices and inferences (#networks) to my #collection of #morphological #matrices we revisited for an upcoming paper by Susanne Renner, Dmitry Sokoloff, and me on surviving ancestors, hard polytomies, and seed plant evolution.

doi.org/10.6084/m9.f...

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Two new bird species from the Amazon Basin described based on bioacoustics and morphological data | Blog Two new antbird species discovered in the Amazon Basin and described in the open-access journal Vertebrate Zoology.

๐ŸชถTwo new antbird species have been discovered in the Amazon Basin through #bioacoustics and #morphological characteristics. The description has been published in the #OA #journal Vertebrate Zoology.

Read more about it on our blog ๐Ÿ‘‡

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๐ŸŒฟ๐˜Š๐˜ข๐˜ต๐˜ข๐˜ญ๐˜ฑ๐˜ข ๐˜ญ๐˜ถ๐˜ต๐˜ฆ๐˜ข is a newly described #species within the Bignoniaceae (trumpet-creeper) family.

Discovered in China's Henan Province, the species was identified using a combination of #morphological comparisons and #phylogenetic analyses.

๐Ÿ‘€ Check it out: doi.org/10.3897/phyt...

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๐Ÿค” What's the difference between ๐˜ˆ๐˜ฎ๐˜ข๐˜ฏ๐˜ฏ๐˜ข ๐˜บ๐˜ถ๐˜ฏ๐˜ซ๐˜ถ๐˜ฆ๐˜ฏ๐˜ด๐˜ช๐˜ด and ๐˜ˆ๐˜ฎ๐˜ข๐˜ฏ๐˜ฏ๐˜ข ๐˜ข๐˜ฏ๐˜ฉ๐˜ถ๐˜ช๐˜ฆ๐˜ฏ๐˜ด๐˜ช๐˜ด?

โ—Spoiler alert - None!

Molecular evidence and #morphological #taxonomy reveal that ๐˜ˆ. ๐˜บ๐˜ถ๐˜ฏ๐˜ซ๐˜ถ๐˜ฆ๐˜ฏ๐˜ด๐˜ช๐˜ด should be treated as a taxonomic synonymy of ๐˜ˆ. ๐˜ข๐˜ฏ๐˜ฉ๐˜ถ๐˜ช๐˜ฆ๐˜ฏ๐˜ด๐˜ช๐˜ด. โคต๏ธ
doi.org/10.3897/phyt...

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A new study reveals two new wood-decaying #fungal species in China based on #morphological characteristics and multi-marker #phylogenetic analyses: ๐˜Š๐˜ฐ๐˜ญ๐˜ต๐˜ณ๐˜ช๐˜ค๐˜ช๐˜ข ๐˜ด๐˜ถ๐˜ฃ๐˜ฑ๐˜ถ๐˜ด๐˜ช๐˜ญ๐˜ญ๐˜ข and ๐˜š๐˜ช๐˜ฅ๐˜ฆ๐˜ณ๐˜ข ๐˜ฑ๐˜ช๐˜ฏ๐˜ช.

๐Ÿ”ŽLearn more here: doi.org/10.3897/myco...

#fungi #newspecies

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The development and domestication of maize ear A comparison between maize and teosinte ears and a simplified model for the origin of the maize ear.

๐ŸŒฝ In this review, Yu et al. explore the #morphological and molecular #development and domestication of #maize.
doi.org/10.1111/jse.... ๐ŸŒฝ
@wileyecology.bsky.social @wileylifesci.bsky.social
#PlantScience #CropSci

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IOB
"Recently, the internal otic region (petrosal and bony labyrinth) has been intensively studied as a source of additional #morphological data, but the #morphology of this region in extinct #tylopods is not well documented..."

doi.org/10.1093/iob/...

Robson, @jmtheodor.bsky.social et al

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Newly found and described wood-inhabiting fungi Spongoides fissurata

Newly found and described wood-inhabiting fungi Spongoides fissurata

This study proposes a new #fungal #genus, ๐˜š๐˜ฑ๐˜ฐ๐˜ฏ๐˜จ๐˜ฐ๐˜ช๐˜ฅ๐˜ฆ๐˜ด, based on #molecular and #morphological evidence, and describes two new species of wood-inhabiting #fungi: ๐˜—๐˜ฆ๐˜ฏ๐˜ช๐˜ฐ๐˜ฑ๐˜ฉ๐˜ฐ๐˜ณ๐˜ฆ๐˜ญ๐˜ญ๐˜ข ๐˜ด๐˜ถ๐˜ฃ๐˜ข๐˜ญ๐˜ฃ๐˜ฐ๐˜ฉ๐˜บ๐˜ฎ๐˜ฆ๐˜ฏ๐˜ช๐˜ข and ๐˜š๐˜ฑ๐˜ฐ๐˜ฏ๐˜จ๐˜ฐ๐˜ช๐˜ฅ๐˜ฆ๐˜ด ๐˜ง๐˜ช๐˜ด๐˜ด๐˜ถ๐˜ณ๐˜ข๐˜ต๐˜ข in southeast China.
๐Ÿ‘‰ doi.org/10.3897/myco...

#newspecies #taxonomy

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๐ŸธA new species of short-legged #toad (๐˜‰๐˜ณ๐˜ข๐˜ค๐˜ฉ๐˜บ๐˜ต๐˜ข๐˜ณ๐˜ด๐˜ฐ๐˜ฑ๐˜ฉ๐˜ณ๐˜บ๐˜ด ๐˜ธ๐˜ถ๐˜ช) has been discovered in the Foding Nature Reserve, China, using #morphological and #molecular data.

๐Ÿ‘€See the full study here:https://doi.org/10.3897/zse.102.161437

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Morphological effects in speech reduction are speaker specific and may partly originate from the wordsโ€™ most frequent phonological context Recently, a number of studies have investigated whether the morphological status of a segment (e.g., whether a segment is part of a stem, a noun suffix, or verb suffix) affects its pronunciation. Most...

Are morphological effects on phonetic #reduction byproducts of phonological context? Patterns of reduction by #Dutch final /ษ™n/ show that some, not all, differences across #morphological categories can be explained by words' typical #phonological context. doi.org/10.16995/lab... #openaccess #LabPhon

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Fig. 2 Multi variate reg ression anal ysis for the six species of molossid bats. (A) OLS regression of Procrustes coordinates (shape scores) versus log10-transf or med BM; (B) OLS regression of Procrustes coordinates (shape scores) vs. log10-transf or med CS; (C) SMA regression of log10- transf or med total wing area (mm2 ) vs. log10-transf or med CS . Def or mation of TPS g ridlines plus landmarks and wireframe (g ray, the overall mean shape; i.e., consensus) of negative and positive most shape score values are exaggerated three times.

Fig. 2 Multi variate reg ression anal ysis for the six species of molossid bats. (A) OLS regression of Procrustes coordinates (shape scores) versus log10-transf or med BM; (B) OLS regression of Procrustes coordinates (shape scores) vs. log10-transf or med CS; (C) SMA regression of log10- transf or med total wing area (mm2 ) vs. log10-transf or med CS . Def or mation of TPS g ridlines plus landmarks and wireframe (g ray, the overall mean shape; i.e., consensus) of negative and positive most shape score values are exaggerated three times.

IOB
"Considering that wing shape and size are good indicators of #ecological and #behavioral traits, we analyze the #morphological variation using #geometric #morphometric tools..."
M A Argoitia et al
doi.org/10.1093/iob/...

#bats #morphology

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Annotated flow diagram illustrating a deep learning framework integrating morphological traits and DNA barcodes (ITS2, matK, rbcL) to identify Fabaceae species. By combining image data and molecular sequences, a CNN artificial neural network (MMNet) enables automatic species identification and barcode evaluation.

Annotated flow diagram illustrating a deep learning framework integrating morphological traits and DNA barcodes (ITS2, matK, rbcL) to identify Fabaceae species. By combining image data and molecular sequences, a CNN artificial neural network (MMNet) enables automatic species identification and barcode evaluation.

This #DeepLearning model integrates #morphological and #molecular data for species identification in the Fabaceae, illustrating the value of DL for species identification and barcode evaluation in #plant #systematics.

๐Ÿ–ฅ๏ธ doi.org/10.1111/jse....

@wileyecology.bsky.social
#PlantScience #Evolution

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IOB - Fresh Ink!
Quantifying the #Denticle Multiverse: A Standardized Coding System to Capture Three Dimensional #Morphological Variations for Quantitative #Evolutionary & #Ecological Studies of #Elasmobranch #Denticles
Rubin, @garethjfraser.bsky.social , et al

doi.org/10.1093/iob/...

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This is my #morphological
Reptile-insect #Hybrid this beautiful specimen is
4.5359237 kilograms
30.48 centimeters and
Can run 7.3363225423 ft/s
This mini Beast is a Fucking Unit ๐Ÿ˜ˆ I just need a name for her

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Deep learning for Fabaceae identification by integrating molecular and morphological data and a solution for barcode selection This study proposes a deep learning framework integrating morphological traits and DNA barcodes (ITS2, matK, rbcL) to identify Fabaceae species. By combining image data and molecular sequences, a CNN...

This #DeepLearning model integrates #morphological and #molecular data for species identification in the #Fabaceae, illustrating the value of deep learning for species identification and barcode evaluation in #plant #systematics.

๐Ÿ–ฅ๏ธ doi.org/10.1111/jse....

@wileyecology.bsky.social #PlantScience

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Morgan P. Le Dรป et al. in @ChemSusChem: "#Platinum-#ped #Carbon #Nitride-Loaded Poly(N-Isopropylacrylamide) #Hydrogel Thin #Films for Green #Hydrogen Production Systems: #Morphological Study for Higher Efficiency":

ChemSusChem 18, e202501550 (2025)

doi.org/10.1002/cssc...

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Five new genera and revival of a genus based on molecular phylogenetic and morphological evidence in Trichosporeae (Gesneriaceae) Phylogenomic analysis of Trichosporeae (Gesneriaceae) resolves polyphyly in Raphiocarpus, Briggsia, and Boeica. Integrative morphology identifies synapomorphies (e.g., stigma bilobation, floral appen...

Trichosporeae is the most #species-rich, systemically complex, and morphologically diverse tribe in the Old World Gesneriaceae. Liu et al. report 5 new genera based on molecular #phylogenetic and #morphological evidence.

๐Ÿ’ doi.org/10.1111/jse....

#systematics #evolution #phylogeny #PlantScience

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#Morphological traits and #environmental preferences of the Blunt-headed tree #snake: the effects of sex and ontogeny zslpublications.onlinelibrary.wiley.com/doi/10.1111/... #arboreal

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Make sure you didn't miss IOB 's

#Morphometrics Methodology Impact the Evaluation of #Morphological Variation

doi.org/10.1093/iob/...

A D Rummel, E T Sheehy, et al

& read more about what Andrea Rummel has been up to lately

www.rummellab.com

#biology #morphology #bats #science

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Benthoplanidae, a new family of benthic ctenophores (Platyctenida), based on morphological and genetic data The benthic ctenophore Benthoplana meteoris (adults left and bottom, planktonic juveniles to the top right), type species for the genus, which in turn is type for the newly erected family: Benthoplan...

So you think you know your ctenophores?
Think again!

Bezio et al. describe a new family of benthic ctenophores, based on #morphological and #genetic data. Read their findings in a new #OpenAccess paper in #JSE!

๐Ÿชผ doi.org/10.1111/jse....

#EcoEvo #systematics #jelly

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Phylogenetic and cytogenetic analyses reveal generic paraphyly and chromosome evolution in Bittacidae (Insecta: Mecoptera) Many genera were erected without phylogenetic validation in Bittacidae (Insecta: Mecoptera), leaving their generic statuses contentious. We investigated the phylogenetic relationships and reconstruct...

Using an integrative approach combining #molecular, cytogenetic, #phylogenetic, and #morphological #data, Le-Le He and Bao-Zhen Hua reveal generic paraphyly and #chromosome #evolution in Bittacidae.

๐Ÿ”Ž doi.org/10.1111/jse....

#BugSky #insect #scorpionfly

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Experimental setup. (A) models performed simulated head flicks in an aquarium, mounted on a rod which allowed for unconstrained rotation around their center of mass (COM). Setup illustration is not to scale. (B) models were filmed from below for kinematic tracking in videos capturing their position before the latch dissolved and ending when the head reached and angle of 45โ . Total length of the Chaetodon auriga model pictured is 27 cm. (C) The moment of inertia was calculated by measuring the surface area (e.g., โ ) and the distance from the axis of rotation (e.g., โ ) of segments along each morphology (head, body, and fins). Measurements were then incorporated in the MOI equation, along with the relevant material mass (see Equation (1), in the โ€œMethodsโ€ section).

Fig. 2 Experimental setup. (A) models performed simulated head flicks in an aquarium, mounted on a rod which allowed for unconstrained rotation around their center of mass (COM). Setup illustration is not to scale. (B) models were filmed from below for kinematic tracking in videos capturing their position before the latch dissolved and ending when the head reached and angle of 45โ . Total length of the Chaetodon auriga model pictured is 27 cm. (C) The moment of inertia was calculated by measuring the surface area (e.g., โ ) and the distance from the axis of rotation (e.g., โ ) of segments along each morphology (head, body, and fins). Measurements were then incorporated in the MOI equation, along with the relevant material mass (see Equation (1), in the โ€œMethodsโ€ section).

IOB
Twist and Snout: Head and Body #Morphologies Determine Feeding #Kinematics in Substrate-Biting #Fishes
by
Perevolotsky, Brotman-Krass, Ratner, Avigad, Summers, Donatelli, Holzman

doi.org/10.1093/iob/...

"Using models that capture the natural #morphological variation of biters..."

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Fig. 6Pisiform (A), scapholunare (B), carpometacarpus (Cโ€“G), and manual phalanx II-1 (H) anatomy of Aegotheles cristatus (Australian owlet-nightjar, YPM 124258). Scale bars = 5 mm.

Fig. 6Pisiform (A), scapholunare (B), carpometacarpus (Cโ€“G), and manual phalanx II-1 (H) anatomy of Aegotheles cristatus (Australian owlet-nightjar, YPM 124258). Scale bars = 5 mm.

IOB
"We assembled a #phylogenetic dataset of 203 #morphological characters from the pectoral girdle and forelimb #skeleton..."
@albertonykus.bsky.social & E M Steell, R B J Benson, D J Field

doi.org/10.1093/iob/...

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Humerus anatomy of Aegotheles cristatus (Australian owlet-nightjar, YPM 124258). Scale bar = 5 mm.

Humerus anatomy of Aegotheles cristatus (Australian owlet-nightjar, YPM 124258). Scale bar = 5 mm.

IOB
"We assembled & vetted a dataset of 203 characters, which were then scored for a phylogenetically diverse range of 75 extant avian #taxa & incorporated into #phylogenetic analyses..."

read
doi.org/10.1093/iob/...

@albertonykus.bsky.social et al

#avian #ornithology #morphological #fossils

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Chameleonic Nature of Aฮฒ: Implications for Alzheimer's and Other Amyloid Diseases You have to enable JavaScript in your browser's settings in order to use the eReader.


What do proteins, animal forms & languages have in common? #Evolution! Unified framework detects evolutionary leaps #branching across #molecular, #morphological, and #cultural scales onlinelibrary.wiley.com/doi/epdf/10....
#Genomics #Adaptation
#ComputationalBiology #Biology

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IOB Fish centric week-
Four-bar Geometry is Shared among Ecologically Divergent Fish Species
H Camarillo et al
doi.org/10.1093/iob/...
Understanding the factors that influence #morphological #evolution is a major goal in #biology. One such factor is the ability to acquire and process prey...

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Their study (DOI: 10.1093/hr/uhae227), published in Horticulture Research on August 9, 2024, reveals how structural traits and gene networks influence fruit abscission.
#Morphological #muscadine
Details: doi.org/10.1093/hr/uhae227

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Belanger is third from the left and see her lab where the image is from https://www.udmercy.edu/about/people/university/ces/biology/belanger-rachelle

Belanger is third from the left and see her lab where the image is from https://www.udmercy.edu/about/people/university/ces/biology/belanger-rachelle

ICB's issue 1 spotlight on
Combined Exposure to #Ecologically Relevant Concentrations of Atrazine and Microcystin Causes #Morphological Changes in the Hepatopancreas of #Crayfish
Reddy, @rmbelanger26.bsky.social et al

doi.org/10.1093/icb/...
* read about
www.udmercy.edu/about/people...

#science

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SICB's #sharkweek spotlight on FABLab's (mepbiomechanics.com) Maddy Hagood, co author on

Relationships in #Shark Skin: Mechanical and #Morphological Properties Vary between Sexes & among Species
Hagood, Alexander, @marianneporter.bsky.social

doi.org/10.1093/icb/...

#science #biologist

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Redirecting

Jinsheng Zhang et al. in Nano Energy: "Real-time #probing of the #interplay between #spinodal #decomposition and #crystallization during #morphological #evolution in printed organic solar cells":

Nano Energy 143, 111301 (2025)

doi.org/10.1016/j.na...

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