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🧬📚 In conjunction with the 𝐌𝐮𝐬𝐞𝐨𝐦𝐢𝐜𝐬 𝐒𝐲𝐦𝐩𝐨𝐬𝐢𝐮𝐦 𝟐𝟎𝟐𝟔 at @nhmwien.bsky.social, we’re launching a special topical collection.

We invite submissions on:
✨ Technical innovations
📜 Historical DNA
🌍 Conservation & policy

📅 Deadline: 𝐒𝐞𝐩𝐭 𝟑𝟎, 𝟐𝟎𝟐𝟔

Read more here: nhcm.pensoft.net/news/1126

#Museomics

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A 3D micro-CT scan of ant Ctenobethylus goepperti encased in amber

A 3D micro-CT scan of ant Ctenobethylus goepperti encased in amber

Hey bsky! I’d like to share some cool work I recently coauthored that integrates entomology, paleontology, and German cultural history. 🔶🐜⚡️ We discovered a fossil ant in the amber collection of Johann Wolfgang von Goethe! Read on for a delightful story of #museomics and #collectomics. >> 1/

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#Seminar
Join our #MEEGene seminar at @leibnizlib.bsky.social on Zoom next Tuesday, Jan 27, 3PM CET. Listen to
Susanne Reier from @nhmwien.bsky.social, talking about
#Museomics of Alpine #Whitefish
Email meegene@leibniz-lib.de for login details.

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#Seminar
Join our #MEEGene seminar at @leibnizlib.bsky.social on Zoom next Tuesday, Jan 13, 3PM CET and listen to: Sarah Schmid from @usyseth.bsky.social @ele-ethwsl.bsky.social talk about #museomics to improve #eDNA #monitoring of marine fishes!
Email meegene@leibniz-lib.de for login details.

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Huge thanks to my PhD supervisor (@marta-fb.bsky.social) and collaborators (Xi Wang, Carla Canedo-Ribeiro, Lucía Álvarez-González, @thednazoo.bsky.social, @aruizherrera.bsky.social, Rasmus Heller, and Tony King).

#MolecularEcology #EvolutionaryGenomics #PopulationGenomics #Museomics

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The description of P. efatra also involved some #museomics and comparative osteology, to resolve the identity of the highly similar P. tetra. @alicepetzold.bsky.social managed to get DNA sequence from the holotype and a paratype, so we could place them in a mitochondrial tree—far from P. efatra! 🐸🧪

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What a course!🧬🦣

Thanks to this amazing team of instructors @claudiafontsere.bsky.social @jazminrm.bsky.social & @hernmoral.bsky.social for delivering such a great first edition of the #Museomics course.
Thanks to everyone who has joined us this week and good luck with your data!💯

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Los herbarios 🌿son auténticas máquinas del tiempo: gracias a la digitalización y la IA, la #colectómica (uso masivo de datos de colecciones biológicas digitalizadas) revela cómo ha cambiado la #biodiversidad y ayuda a anticipar su futuro:
▶️ doi.org/10.1016/j.ba... #collectomics #museomics #museómica

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Schematic display of an herbarium specimen and its use as an Extended Specimen.

Schematic display of an herbarium specimen and its use as an Extended Specimen.

🌿📖 New #BAAE article: Collectomics in plant biodiversity research

By merging herbaria, #Museomics & data science, researchers trace biodiversity change through time — shaping future conservation strategies. 🌎

📖 DOI:https://doi.org/10.1016/j.baae.2025.07.002
@gfoesoc.bsky.social

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We are extremely happy to have kicked off this first edition of the #Museomics course with @hernmoral.bsky.social @claudiafontsere.bsky.social & @jazminrm.bsky.social and a great group of participants working on very different systems!

#Museomics #aDNA #Bioinformatics

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How do you sequence the nearly unsequenceable?

Using #myBaits targeted enrichment, researchers recovered DNA from rare, historical darkling beetles–reshaping our understanding of Eurynotina evolution.
resjournals.onlinelibrary.wiley.com/doi/10.1111/...
#NGS #Museomics #Entomology #Genomics

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Registrations are now closed for the #Museomics course!

Thanks everyone!

www.physalia-courses.org/courses-work...

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akub Tetla exploring the Lepidoptera collection at Lund University.

akub Tetla exploring the Lepidoptera collection at Lund University.

Jakub worked with @jadrankarota.bsky.social and @lepphylo.bsky.social, applying DNA sequencing to degraded specimens and integrating collection data into phylogenomic studies.

Congratulations, Jakub!🦋🧬
#10kLepGenomes #Lepidoptera #Museomics

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Jakub Tetla preparing a database of butterflies that will be used in the study, based on museum collections.

Jakub Tetla preparing a database of butterflies that will be used in the study, based on museum collections.

🚀 Second STSM of 10kLepGenomes!
Jakub Tetla (Jagiellonian Univ., Poland) visited @jadrankarota.bsky.social (Lund, Sweden) from 24–26 Sept 2025.
The goal was to integrate museum collections with phylogenomics to study West Palearctic tiger moths.

#10kLepGenomes #Lepidoptera #Museomics

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Neobatrachus sudellae Photo: Stephen Mahony

Neobatrachus sudellae Photo: Stephen Mahony

Neobatrachus aquilonius. Photo: Jules Farquhar

Neobatrachus aquilonius. Photo: Jules Farquhar

Off to AES 2025 in Brisbane to talk Neobatrachus! Records suggest both tetraploids can show up in Queensland. After three years with their specimens in Germany, the idea of seeing them in person feels a bit like meeting long-distance friends IRL 🐸 #Neobatrachus #amphibian #museomics

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Unrecognised DNA Degradation in Flash‐Frozen Genetic Samples in Natural History Collections Optimal preservation of tissues from the field to long-term cryo-storage is paramount to securing genetic resources for research needs. DNA preservation techniques vary, with flash freezing currently...

Flash-frozen tissues are considered the gold standard for DNA—but our analysis of field-collected samples found surprising degradation.
Preserving in buffer before freezing may be more robust in real-world conditions.
👉 doi.org/10.1111/1755...
#Museomics #Genomics #Fieldwork #DNApreservation

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Dental calculus deposits on the teeth of a plains zebra (Equus quagga) specimen housed at the Royal Museum for Central Africa, Belgium.

Dental calculus deposits on the teeth of a plains zebra (Equus quagga) specimen housed at the Royal Museum for Central Africa, Belgium.

New paper out! doi.org/10.1111/1755...
Dental calculus allows us to study the oral microbiome of wild #mammals, but it's still underutilised! 🦷🦠
In this study, we recover oral #microbiome data from the dental calculus of 32 mammal species and share recommendations for future research.
#museomics

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Whole-genome variant detection in long-read sequencing data from ultra-low input patient samples Long-read sequencing provides a more complete view of the genome than short-read sequencing, with advantages in the detection of structural variants, tandem repeats, and small variants (single nucleot...

#PacBio #ULI #HiFi sequencing goes clinical:

Really cool paper showing that Ultra-low input (ULI) HiFi sequencing can help cancer diagnostics.
Only emphasizes how interdisciplinary the ULI field is ( #museomics, #single-cell #sequencing, #diagnostics etc)

www.medrxiv.org/content/10.1...

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I had the huge opportunity to share the preliminary results of my research project during the "ancient biomolecules and museums" session at ISBA11. What a great honor! 🥰
#ancientDNA #popgen #museomics #humanevolution #ISBA11 @isba11.bsky.social

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Poster presentation at ESEB 2025

Poster presentation at ESEB 2025

Poster titled 'The Evolution of the Mammalian Oral Microbiome'

Poster titled 'The Evolution of the Mammalian Oral Microbiome'

Thanks to everyone who stopped by my poster for your thoughful questions, remarks and suggestions (all duly noted)!
If you didn’t get to see it and are interested in wild animal #microbiomes 🦠🦷 or #museomics 🦴🧬, I’m posting it here -- an attempt to artificially extend its lifespan! #ESEB2025

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Examples of dental calculus in different mammalian species ranked by amount from 0 (no calculus) to 3 (full incrustation)

Examples of dental calculus in different mammalian species ranked by amount from 0 (no calculus) to 3 (full incrustation)

Fantastic dental calculus and where to find it

Johnny Richards and team (@markella-morait.bsky.social + curators from 5 museums) survey >140 mammalian species with >1,600 specimens to understand what factors determine dental calculus formation. #aDNA #museomics
www.biorxiv.org/content/10.1...

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It looks like the @eseb2025.bsky.social #museomics symposium was a great success. If you want to learn more about the analysis of genomics data derived from natural history collection, we only have 4 seats left for our course in Nov.
#eseb25

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Navigating uncertainty in museum workflows: genomic data mining and curation of the Diptera collections hosted at RMCA As part of its extensive Diptera holdings, the Royal Museum for Central Africa (RMCA) houses over 100,000 specimens of Tephritidae and Syrphidae, which represent a critical resource for taxonomic and ...

Illumina short read whole genome sequencing can work well even with degraded insect material, a study on Diptera collections at the Royal Museum for Central Africa shows.

#naturalhistory #museomics #genomes @naturalsciences-be.bsky.social

doi.org/10.3897/BDJ....

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Full capacity session, there is a wait to join session

Full capacity session, there is a wait to join session

People getting turned away from #museomics session! Full house! #eseb2025

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Great to see Tom Gilbert still holding the #microbiome flag high, focusing mostly on why we need to study wildlife microbiomes more, even in the #museomics session. 🦠

#hologenomics #eseb2025

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Finally, the #museomics symposium. #ESEB2025

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Video

🌊 From Deep Sea to Dinner Plate: Explore the world of Gadiformes! 🍽️ Cod, Haddock, Pollock, Hake, Whiting, Rattail & allies are vital to marine ecosystems & global fisheries, making them worthy of our attention both in science & on our dinner plates. #fisheries #conservation #TeamFish #museomics 🐠

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@mfnberlin.bsky.social @naturhistoriska #birds #ornithology #collectionsareessential #museomics #naturalhistory #genomics

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Unlocking genetic secrets of the world's most vital fungi collection Fungi underpin all life on Earth, yet it is estimated that more than 95 per cent of fungal species remain undiscovered. Holding over 1.25 million dried specimens, the Fungarium at Royal Botanic Garden...

In case you want to know more about Kew’s Fungarium and our sequencing work! #Fungi #museomics @rbgkew.bsky.social

www.newscientist.com/video/248375...

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Interview to our February AaRCTikTalks speaker Alexander Salis · AaRC

Have a look at our new 2025 Blog entry from
@AaRC_Community where we interviewed Dr. Alexander Salis and Dr. Anna Penna (@apenna.bsky.social‬) about the research project he presented in February 2025 #AaRCTikTalks.

animal-adna.org/blog/2025/05...
animal-adna.org/blog/2025/05...

#aDNA #museomics

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