Copy Number Variation: A Substrate for Plant Adaptation and Stress Response in Arabidopsis
Abraham, L., de Meaux, J. et al.
Paper
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#CopyNumberVariation #ArabidopsisGenetics #PlantAdaptationStressResponse
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#CopyNumberVariation
Latest posts tagged with #CopyNumberVariation on Bluesky
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Benchmarking scRNA-seq #CopyNumberVariation callers
6 methods
InferCNV
CONICSmat
CaSpER
copyKAT
Numbat
SCEVAN
mapped to 100 kB bins
Performance on Euploid vs Aneuploid/Tumor datasets
Differential sensitivity/specificity to gain, base, or loss
bioRxiv 2024
www.biorxiv.org/content/10.1...
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Tumor-like properties of #SmoothMuscleCell progenies in #Atherosclersis🤠
SMC progenies exhibit
1⃣ #DNADamage #CopyNumberVariation
2⃣Activated Cancer-like signals
3⃣Stem-like growth
Clonality; Non-senescence
SMC KRasG12D transgene ⬆️atherogenesis!
#CircAHA 2024
www.ahajournals.org/doi/abs/10.1...
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STmut
Inferring+Visualizing #SomaticMutation #CopyNumberVariation Germline SNP/#AllelicImbalance in Tumor #SpatialTranscriptomics
#SomaticMutation SNP CNV
sequencing-based ST needed
#GenomeBiology 2023
genomebiology.biomedcentral.com/articles/10....
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