Latest posts tagged with #GenBank on Bluesky
The "Credits and Acknowledgments" section that is present in the gbrel.txt file included with GenBank release 270.
From #NCBI Insight | #GenBank Release 270 is here | #Bioinformatics #OpenScience #OpenData 🧬 🖥️ 🧪 🔓 | Thank you to the NCBI staff at the NIH that allows science to move forward! The attached image is from the gbrel.txt file on the FTP server.
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ncbiinsights.ncbi.nlm.nih.gov/2026/03/05/g...
From #NCBI Insight | Starting this spring, you will be able to complete all #GenBank submissions in the "Submission Portal GenBank". It will support data types that you currently submit through BankIt | 🧬 🖥️ 🧪 #Bioinformatics #Genomics #OpenScience
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ncbiinsights.ncbi.nlm.nih.gov/2026/01/27/b...
For the sake of the entire #biology 🧪🧬🦠🧫🔬💊and #medsky science 🩺community, I think @enasequence.bsky.social and the #bioinformatics community needs to prioritise development of new tools and functionality in-line with #NCBI and #Genbank, before it potentially goes down sometime in the near future.
From #NCBI Insight | #GenBank Release 268.0 | 258,320,620 traditional records containing 5,676,067,778,413 base pairs of sequence data | #OpenScience #OpenData #Bioinformatics #Genomics 🧬 🖥️ 🧪
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ncbiinsights.ncbi.nlm.nih.gov/2025/08/26/g...
Drs Pilar Alda, Annia Alba & Nicolás Bonel discuss lessons from #liver #fluke #phylogenies: when #homology fails. #phylogeneticanalysis #sequencealignment #GenBank #Fasciola #hepatica #COIbarcode #nad1 @cnrs.fr @ifremer.bsky.social @umontpellier.bsky.social
authors.elsevier.com/a/1lePk5Eb1x...
From #NCBI Insight | Upcoming Changes to #GenBank Project Lists and Symlinks | #OpenScience #OpenData #Bioinformatics #Genomics 🧬 🖥️ 🧪
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ncbiinsights.ncbi.nlm.nih.gov/2025/08/20/u...
Since the current …everything has folks a little on edge about .gov websites going down, be aware that #NCBI (hosts of #Pubmed, #GenBank, and other important #biomed database sites) will be offline from this Friday evening into the weekend.
From #NCBI Insight | #GenBank Release 266.0 now available | I like to acknowledge all of the great people who made the release possible | #OpenScience #OpenData 🧬 🖥️ 🧪
NCBI Insight ⬇️
ncbiinsights.ncbi.nlm.nih.gov/2025/06/10/g...
Attached image from this file ⬇️
ftp.ncbi.nlm.nih.gov/genbank/gbre...
A study developed a workflow to enhance eDNA diversity monitoring by evaluating #GenBank for marine fishes.
Key findings: COI covers 70% of NE Atlantic marine fishes, 12S rRNA about 50%.
The tool detects & eliminates errors, improving taxonomic accuracy.
👉 bit.ly/49D06Vi
#eDNA #innovation
Today we have the pleasure of welcoming Dr. Zdenek Kamenik from the Institute of Microbiology, Academy of Sciences in Prague to our Department Seminar.
#unifrbiology #biology #unifr #fribourg #seminar #biologyseminar #bioinformatics #CluSeek #GenBank
Två små lamm kikar fram mellan krubbans spjälor. Den främsta lutar sig nyfiket fram.
Nu är fårhuset fullt av små bräkanden. ❤️ 🐑 #livetpålandet #genbank
I'm trying to fix a genbank submission for a publication, but I find it hard to get responses from NCBI. Anyone have a connection to speed things up? #NCBI #Genbank
A world map with lots of red X's and a few green checkmarks Text: DNS Propagation Checker whatsmydns.net lets you instantly perform a DNS lookup to check a domain name's current IP address and DNS record information against multiple nameservers located in different parts of the world.
#Pubmed #NCBI #NLM #NIH #genbank
www.whatsmydns.net#A/ncbi.nlm.n...
Re the #NIH downtimes (including #NCBI #genbank #pubmed etc) See tldr.nettime.org/@ww/11408997...
"Someone is doing networking... Badly..."
Really feel for all those dealing with this
(from NIH IT, to global users).
In general, the decimation of so much critical infrastructure is hard to fathom.
Re DNA sequence DBs: While sequence is shared across #INSDC databases #ENA #Genbank #DDBJ, the presentation and granularity of annotations/metadata can differ notably, with diff. benefits, impacting searches and downstream analyses. All INSDC databases must be maintained - annotations are important
Anybody know what’s going on with #NCBI #genbank? Not completely down, but getting lots of “page not found” errors and now seeing note about experiencing heavy traffic. #Bioinformatics
Flow diagram describing how PyNCBIminer facilitates sequence retrieval and supermatrix construction during the assembly of phylogenetic datasets.
Meet PyNCBIminer!
This open-source, user-friendly software automates the assembly of large #DNA data sets from #GenBank for #phylogenetic reconstruction using the supermatrix method--and eliminates the need for large local #databases!
doi.org/10.1111/jse....
#evolution #bioinformatics
And always my favourite near the top, from my friends at the #NCBI | #GenBank 2025 update |
#Bioinformatics #Genomics #Databases 🧬 🖥️ 🧪 | academic.oup.com/nar/article/...
From #NCBI | #GenBank Release 264.0 is now available from ftp.ncbi.nlm.nih.gov/genbank/ | More details here
ftp.ncbi.nlm.nih.gov/genbank/gbre... and here
ncbiinsights.ncbi.nlm.nih.gov/2024/12/23/g... #Bioinformatics #Genomics
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Multitasking prepping sequence data for submission to #GenBank while working on my #interfolio annual report
Hülsenfrüchte – der neue Hoffnungsträger für unsere #Ernährung
In unserer frischen Multimedia-Geschichte erfahrt viel spannendes zu Erbse, Linse & Co.: zur #Vielfalt der Leguminosen in unserer #Genbank und unserer Forschung an diesen wichtigen Eiweißpflanzen.
#wisskomm
https://www.ncbi.nlm.nih.gov/genbank/sars-cov-2-seqs/
#SARSCoV2 Sequences currently available in #GenBank and the Sequence Read Archive (#SRA).
The sequence lists were last updated Fri May 1 16:24:23 EDT 2020, and are updated as additional sequences are released. The table content...
How many species & under what names? Using #DNA #barcoding & #GenBank data for west Central African #amphibian #conservation http://dx.plos.org/10.1371/journal.pone.0187283
