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Posts tagged #PlantGenomics

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Quinoa as a naturally stress-resistant crop: current status and future promises - Stress Biology Quinoa (Chenopodium quinoa Willd.), a semi-domesticated halophyte originating in the Andean region, has emerged as a promising crop for exploiting marginal lands, valued for its exceptional nutritiona...

Quinoa as a naturally stress-resistant crop: current status and future promises

Heng Zhang, Guojun Feng & Yaozu Feng

link.springer.com/article/10.1...

#Quinoa #Halophyte #PlantGenomics #AbioticStress

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See how Novogene's transcriptome & grafting methods uncovered a conserved role for PAT1 in wound healing & vascular reconnection across Arabidopsis and spruce. Dive into the case study for full insights. #PlantGenomics #Grafting #Transcriptomics https://tinyurl.com/3pszxzhc

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Zoë

Zoë

We are excited to welcome Zoë to our group. Her work with molecular biology methods will contribute to our ongoing research on functional plant genomics. We are looking forward to the ideas and energy she brings to the lab.

www.izmb.uni-bonn.de/en/pbb/team

#MolecularBiology #PlantGenomics

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Hannah

Hannah

We are delighted to welcome Hannah to our group. She will conduct long-read sequencing to explore plant genomes. We are excited to have her on board and look forward to amazing discoveries ahead!

www.izmb.uni-bonn.de/en/pbb/team

#PlantGenomics #LongReadSequencing #Bioinformatics #Nanopore

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Begonia manicata plant with red, soft outgrowths emerging from the leaf and stems. Photo credit: Jakob Maximilian Horz. Source: https://doi.org/10.64898/2026.02.26.708300

Begonia manicata plant with red, soft outgrowths emerging from the leaf and stems. Photo credit: Jakob Maximilian Horz. Source: https://doi.org/10.64898/2026.02.26.708300

🌿 New preprint: Genome sequence of Begonia manicata and genes responsible for striking red color of its leaf/stem outgrowths. Pigmentation appears linked to anthocyanin biosynthesis genes that are strongly expressed in the red tissues

📄 doi.org/10.64898/202...
#PlantGenomics @puckerlab.bsky.social

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BOTANIC-0: a series of foundation models for plant genomic data
doi.org/10.64898/202...

Cookbook for plant genome sequences
doi.org/10.1186/s128...

#PlantGenomics #LongRead #Bioinformatics #AI

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Sequence the full genomes of plants & animals with Novogene's Animal & Plant WGS. Detect SNPs, InDels, SVs & CNVs with high accuracy across species. Ideal for breeding, population genomics & conservation. #PlantGenomics #AnimalGenomics #WGS https://tinyurl.com/yy6rnfbp

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Sequencing output per P2 flow cell. Details: https://www.izmb.uni-bonn.de/en/pbb/news#P2OS

Sequencing output per P2 flow cell. Details: https://www.izmb.uni-bonn.de/en/pbb/news#P2OS

We (Julie) are still very active in the long-read sequencing business. Please see an updated figure regarding the output per P2 flow cell below. Reach out if you would like to collaborate!

Details: www.izmb.uni-bonn.de/en/pbb/news#...

#PlantGenomics #LongReads @bpucker.bsky.social

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Cover of Grassland Research journal showing a winding river through a grassland ecosystem with plants and animals, published by Wiley.

Cover of Grassland Research journal showing a winding river through a grassland ecosystem with plants and animals, published by Wiley.

Genome-wide analysis identifies 20 MsAlkB genes in alfalfa.

MsALKBH2 functions as RNA m6A eraser, enhancing drought tolerance by reducing oxidative stress.

Learn how epigenetic regulation can improve legume resilience ➡️https://ow.ly/F5sT50YhNy8

#PlantGenomics #DroughtTolerance

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Cover of Grassland Research journal showing a winding river through a grassland ecosystem with plants and animals, published by Wiley.

Cover of Grassland Research journal showing a winding river through a grassland ecosystem with plants and animals, published by Wiley.

Genome-wide analysis identifies 20 MsAlkB genes in alfalfa.

MsALKBH2 functions as RNA m6A eraser, enhancing drought tolerance by reducing oxidative stress.

Learn how epigenetic regulation can improve legume resilience ➡️https://ow.ly/xmU650YhNzf

#PlantGenomics #DroughtTolerance

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Validate User

🌱Takeaway: Ecological isolation, limited dispersal, and life-history traits drive both speciation and extinction risk in Homoranthus. (9/9)

👉 doi.org/qr49

#PlantScience #EvolutionaryBiology #PopulationGenetics #PlantGenomics #AoBpapers

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PuckerLab

PuckerLab

Celebrate the brilliance of women driving plant sciences forward at Pucker Lab on International Day of Women and Girls in Science! 🌱🔬 Here's to curiosity, innovation, and shattering glass ceilings in STEM! 💪♀️ #WomenInScience #PuckerLab #PlantGenomics #GirlsInSTEM

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Better grasses, better pastures! 🌾 New research maps repetitive DNA in Urochloa species, key tropical forage grasses, uncovering Ty3/Gypsy retrotransposons & satellite DNA that distinguish species and ploidy. #PlantGenomics #Cytogenetics #ForageCrops
https://ow.ly/bnub50XW7rW

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See how Novogene helped build a soybean pan-genome combining wild, landrace & cultivated accessions to uncover structural variation tied to yield, flowering & stress traits. A game-changer for crop genetics. #PlantGenomics #Breeding #PanGenome https://bit.ly/49QL2Fe

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Developmental pathways in plants: Lessons from Arabidopsis for crop innovation Abstract. The emergence of molecular biology, along with the use of Arabidopsis thaliana as a model organism, has significantly enhanced our understanding

From a tiny model plant to global food systems 🌍🌱

Review in The Plant Cell explores how decades of research on Arabidopsis thaliana have transformed our understanding of plant development.

#PlantScience #Arabidopsis #PlantGenomics

👇

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See how Novogene used long-read sequencing & hybrid assembly to build high-quality reference genomes in polyploid & large plant species (e.g. chrysanthemum, Torreya). Learn methods & breakthroughs. #PlantGenomics #LongRead #GenomeAssembly https://bit.ly/3VJkqjs

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See how Novogene's transcriptome & grafting methods uncovered a conserved role for PAT1 in wound healing & vascular reconnection across Arabidopsis and spruce. Dive into the case study for full insights. #PlantGenomics #Grafting #Transcriptomics https://bit.ly/4focuvc

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Team Animal seems to be winning this round 🐱🌱!

Swing by Booth 219 at PAG 2026 to cast your vote in the ultimate Plant vs. Animal showdown, see live demonstrations of our Vega sequencing system, and meet the PacBio experts behind the science.

#PacBio #PAG33 #Vega #AnimalGenomics #PlantGenomics

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Sequence the full genomes of plants & animals with Novogene's Animal & Plant WGS. Detect SNPs, InDels, SVs & CNVs with high accuracy across species. Ideal for breeding, population genomics & conservation. #PlantGenomics #AnimalGenomics #WGS https://bit.ly/49NYglV

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Maria

Maria

New year, new students! ✨

We are pleased to welcome Maria, who is going to be with us for a short time to learn everything you need to start a plant genomics project, from DNA extraction to sequencing. Julie is going to teach ONT sequencing! 🧬

#Genomics #Puckerlab #plantgenomics #Plantscience #ONT

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Of the six ribotypes identified by Mucciarelli et al., three come from the Turchino population—collected in a single site (Bric Geremia), which counts fewer than 50 plants. Such diversity in a small population is remarkable! #GeneticVariation #EndangeredPlants #PlantGenomics 8/9

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We’re heading to PAG 33! 🧬
📍 Booth# 322

Check out this Scientific Workshop:
From Genotype to Phenotype: Chromosome-Scale Assemblies
🗓️ Tue, Jan 13 | 1:30–3:40 PM
📍 Pacific D

Meet us or book time 👉 cantatabio.com/event...

#PAG33 #Genomics #GenomeAssembly #T2T #PlantGenomics

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By mapping 3,534 genome-wide binding sites, the study shows PKL coordinates with transcription factors HY5, PIFs, and TCPs to establish permissive chromatin environments for regulated gene expression.

#PekingUniversity #PKUResearch #GeneRegulation #Epigenetics #PlantGenomics #ChromatinRemodeling

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How can genome sequencing training foster more equitable global science? 🌍
An interview with doctoral researcher Catarina Lino on a hands-on plant genomics workshop in Zimbabwe - and what it means for North–South collaboration.
👉 tinyurl.com/9knhj92v
#PlantGenomics #ScienceCollaboration #maxplanck

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Latest update on Julie's amazing long read sequencing work (output per flow cell)
www.izmb.uni-bonn.de/en/pbb/news#...
#PlantGenomics #LongReads @puckerlab.bsky.social

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Reconstruct animal and plant genomes with our #denovosequencing services. Uncover genetic structure, novel genes, and evolutionary insights for #biodiversity and agriculture research. Learn more: https://bit.ly/3VJTeRR
#PlantGenomics #AnimalGenomics #GenomeAssembly #Agrigenomics #GenomicsInnovation

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Pangenomic structural variant patterns reflect evolutionary diversification in Brassica napus. #StructuralVariants #Pangenomes #BrasicaNapusGenome #PlantGenomics #Bioinformatics #GenomeBiology 🧪🧬 🖥️
link.springer.com/article/10.1...

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Giant chromosomes of a tiny plant - the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta). #LiverwortsGenome #PlantGenomics #LargeChromosomes @gigascience.bsky.social 🧪🧬 🖥️
academic.oup.com/gigascience/...

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Giant chromosomes of a tiny plant - the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta) AbstractBackground. The liverwort A. endiviifolia, a dioicous, simple thalloid species, is notable for its cryptic diversity, habitat adaptability, genomic

Our paper “Giant chromosomes of a tiny plant” is out in @gigascience.bsky.social! We present a T2T genome assembly of the simple thalloid liverwort Apopellia endiviifolia with truly giant chromosomes. 🌱🧬 #plantgenomics #T2T #liverworts @nanoporetech.com
Thanks @ncn.gov.pl !

tinyurl.com/m8tkkxd3

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#TropicalPlants
Study identifies 2,586 orphan genes in Rosa chinensis, revealing their role in stress responses and flowering.
Details: https://maxapress.com/article/doi/10.48130/tp-0024-0036
#PlantGenomics #Roses

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