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Your Ants Are Ready for Download An open-access database of thousands of high-resolution scans reveals the inner anatomy of nearly 800 ant species—and hints at a future of digitizing biodiversity in three dimensions far beyond ants.

Ants. Hundreds and hundreds of ants, ready for download.

Described as a breakthrough in the journal Nature Methods, japanresearchreport.substack.com/p/your-ants-....

#Ants #Biodiversity #Ecology #MicroCT #JapanResearchReport

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With the dawn on #engineering at #KeeleUniversity we're also seen interest in #biomechanics. One example being Hector Allen's project which is using a novel combination of #microCT density analysis and #3Dscanning to reconstruct joints of the deceased from their #SkeletalRemains. Amazing stuff!

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The fruit fly of plant science for #3DThursday! 🌱 #ModelOrganism

🔬: #microCT, Zeiss @zeiss-microscopy.bsky.social Versa 520 XRM (contrast-enhanced with OsO₄)
🌱: Arabidopsis thaliana
🥼: Keith Duncan @cygnusplantxray.bsky.social
🏛️: Danforth Center @danforthcenter.bsky.social
🎬: syGlass.io #syGlass

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New in syGlass for #3DThursday: a VR surface brush for editing meshes🖌️Here, I’m isolating a component from a @lumafield.bsky.social #microCT scan of a VR headset, painting partitions directly onto the surface and exporting clean .OBJs: v2.6.0

#VR #3DVisualization #syGlass #ScientificVisualization

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Our X4 POSEIDON benchtop system has been recognized with a Good Design Award!
This recognition celebrates its user-centered, modular design, which brings advanced 3D X‑ray microscopy to a much wider audience.

Learn more: goto.bruker.com/3LyiIQ9

#X4POSEIDON #MicroCT #XRM #GoodDesignAwards #Bruker

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🪰 For #3DThursday, this #microCT scan of an adult #Drosphila (Schoborg et al.) captures the entire fly intact. Using #VR, we can teach anatomy by labeling the 3D fly from a 2D diagram. Spatial context changes everything. #SciComm

🔬: Bruker SkyScan 1172
🏛️: UWyoming
🎬: #syGlass, v2.5.0

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🎓 We’re thrilled to welcome Kimia to our team!
She’s starting her PhD on in vivo quantification of bone marrow adipose tissue using phase-contrast microtomography 🧬🦴
#PhD #Research #Science #Imaging #MicroCT

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Serial section videography (SSV): A low-cost protocol for generating 3D reconstructions of internal plant structure

New in #AppsPlantSci by Jacob Suissa & Giselle Reyes

bsapubs.onlinelibrary.wiley.com/doi/full/10.... #botany #plantanatomy #plantdevelopment #microCT #PlantScience

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For #3DThursday we’re introducing Dynamic Depth color mapping! It encodes distance with smooth depth-aware gradients so layered structures pop without losing context.

🔬 #MicroCT of a P1 mouse
🥼 Hsu Lab, Baylor, @cwloganhsu.bsky.social
🎬 syGlass.io

#Microscopy #SciComm #3DVisualization #syGlass

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Inside the FSBI - FSBI PhD Student, Rebecca Bentley
Inside the FSBI - FSBI PhD Student, Rebecca Bentley Rebecca Bentley is an FSBI funded PhD student at the University of Bristol, working on the evolution of ecomorphology in armoured catfish (an adaptive radiation of over 1,070 species). In this video, she focuses on how jaw shape is linked to diet and other ecological factors, but constrained by phylogenetics. With some phenomenal micro-CT images of these charismatic little catfish, we get a glimpse into the anatomical features Rebecca is examining as part of her PhD.

A new installation of #InsideTheFSBI! We hear from FSBI PhD Student, Rebecca Bentley, who is based at the University of Bristol. Rebecca talks about her work on jaw shape in armoured #catfish and how it links to #ecological factors like diet, but constrained by #phylogenetics. Some amazing #microCT!

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#microCT scan of the left palpal bulb (male copulatory organ) of a grass spider I found wandering Beckman's hallways last week! 😍(He was on his last legs when he was preserved for the scan). Taken in the Microscopy Suite of @beckmanillinois.bsky.social and rendered in the Visualization Lab.

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🍺 It’s Oktoberfest, so let's look inside beer foam! Non-destructive imaging like this is key for food science and helps us understand how structure and stability affect things like aroma and taste.

🔬: TESCAN DynaTOM #microCT
🥼: Wesley De Boever
🎬: syGlass.io

#Oktoberfest #3DThursday #Microscopy

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We’re hiring! The Ang Lab at Penn State is looking for a motivated Lab Technician to be a part of the team. If you love #Zebrafish, #genetics, #microCT #imaging #science #research #food #fun, come join us! #PennState www.myworkday.com/psu/d/inst/9...

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Day 2: #ImagingPrinciplesOfLife

We kicked off with a fantastic talk by Klára Cigošová #MUNI_MED on the BEE-ST method, developed by Marcos G López in Jan Krivanek’s group showing its power with #MicroCT and #Lightsheet imaging. 🔬

📸 Mouse molar by Marcos González López
🔗 DOI: 10.1126/sciadv.adi0482

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Non-destructive testing for #3DThursday!🥽 Apple Vision Pro vs MetaQuest in a microCT.

🔬: Lumafield @lumafield.bsky.social microCT
🎬: syGlass.io, loading two projects at once

3D imaging like this is used to validate design, catch flaws, and build smarter devices.

#MicroCT #syGlass #VR #SciComm

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🦐 High-res microCT of #Parhyale hawaiensis for #3DThursday! A powerful crustacean model for studying limb development, regeneration, and evo-devo.

🥼: Nipam Patel & Andrew Gillis, 2017
🏛️: University of Cambridge @cam.ac.uk
🎬: syGlass.io

#Parhyale #MicroCT #DevBio #EvoDevo #ModelOrganisms #syGlass

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What’s the first thing you think of when you hear microCT?
Probably bones, right? But with contrast agents, we can also reveal the hidden architecture of soft tissues, like the brain.

#microCT #BrainImaging #Science

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Calling all #ParasiticPlants enthusiasts, especially the fans of #endoparasites: our recent paper on #Pilostyles will be under free open access for 2 weeks!
We combine #PlantAnatomy, development, and #microCT to provide insights into the physiology, sexual system, and ecology of these strange plants

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4D bread baking inside a microCT for #3DThursday?!🍞

🔬: TESCAN DynaTOM
🏛️: TESCAN, thanks to Marijn Boone for the data!
🎬: syGlass.io

Total scan time: 22m8s
Time for 1 scan: 10 seconds
Total scans: 124 volumes

#4DImaging #MicroCT #DynamicImaging #FoodScience #syGlass #VRVisualization #ScientificVR

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Automated Segmentation by Cellpose-SAM using syGlass for #3DThursday! This took about 30 minutes to run on one of the gaming laptops. Crazy.

🔬: Synchrotron #MicroCT
🥼: Keith Cheng, MD, PhD, @pennstateuniv.bsky.social
📝: #CellposeSAM www.biorxiv.org/content/10.1...
🥽: syGlass.io v2.4.0 -- out soon!

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A medley of modalities for #3DThursday! 🔬: #SBSEM, #Lightsheet, #ExM, & #MicroCT! Come see me at M&M in Salt Lake City. mm2025.eventscribe.net/index.asp

🥼: George Spirou (SEM), Elizabeth Engle (Lightsheet), Ksena Longrin (ExM), Lumafield (microCT)

#VirtualReality #syGlass #MM2025

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Last week doctoral researcher Sophie Anuth, co-supervised by @xploraytion Berlin, presented her project on high resolution #synchrotron #microCT & #nanoCT of mineralized tissue at the Berlin School for Regenerative Therapies @ChariteBerlin. Congratulations!

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A #microscopy mystery for #3DThursday!🌾 What is this? 🔍 Things that I know: it is a #plant, it was imaged on a Lumafield #microCT, and the color is a LUT (look up table) that I applied in #syGlass and has nothing to do with the organism (microCT comes in as grayscale). Help! #SciComm

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Markus @markusroesch.bsky.social, a visiting PhD student from CIBIO-BIOPOLIS, University of Porto, is using #microCT scans and geometric morphometrics to study cryptic diversity within #Seychelles endemic bronze #geckos. 🦎

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Zooming in on bone structure by scanning human bone biopsies from ongoing clinical projects using our high-resolution micro-CT scanner 🦴

#BoneResearch #MicroCT #LifeInTheLab #ClinicalScience #BoneHealth #KMEB #OUH

@sdu.dk

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Finally plants for #3DThursday!🌽 A maize root tip, imaged using #microCT, from the Topp Roots Lab.

🔬: @zeiss-microscopy.bsky.social Versa 520 XRM
🥼: Keith Duncan @cygnusplantxray.bsky.social
🏛️: Danforth Center @danforthcenter.bsky.social
📝: academic.oup.com/plphys/artic...
🎬: syGlass.io #syGlass

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Plant life without leaves, roots, or stems: anatomy, development, and 3D structure of the endoparasite Pilostyles blanchetii (Apodanthaceae) in Mimosa hosts AbstractBackground and Aims. The vegetative body of Pilostyles (Apodanthaceae) is highly reduced, composed of cell clusters that occupy the bark of the hos

🚨 New paper alert!
And this is special because it has been in the pipeline for 5 years. We used #microCT scanning to show that, despite their minute vegetative body, #ParasiticPlants like #Pilostyles form an extensive colony within the host bark.

academic.oup.com/aob/advance-...

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🔬 Boost your microCT imaging with MBF Bioscience tools!

🧠 Analyze neurons, vasculature & brain regions using Neurolucida 360, Vesselucida 360 & NeuroInfo.

📘 Use MicroFile+ to convert files, add FAIR metadata & compress data without losing quality.

📖: mbfbioscience.com

#microCT #Neuroscience

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Old dog learning some new tricks
#fossils #EarBones #sloths #MicroCT

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Whoa! so many CT scans! I do scans on a smaller #microCT scale. I have hundreds of models, but took the website offline temporarily due to copyright issues. It'll be back online this summer. Here's an example: a Globorotalia scitula planktic foraminifera - on the order of maybe 200-300 microns.

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