#singleCellRNAseq

@genesndiseases.bsky.social

1 day ago

Researchers use #SingleCellRNAseq to map #obesity-related #glomerulopathy, revealing reduced immune cells, #SPP1 upregulation in T/B cells, altered metabolic & inflammatory pathways, and key podocyte–parietal epithelial interactions.

#OpenAccess: doi.org/10.1016/j.ge...

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Genes & Diseases Journal

@genesndiseases.bsky.social

1 month ago

Single-cell transcriptomics reveals distinct chondrocyte subpopulations and mechanisms driving osteoarthritis pathogenesis.
#SingleCellRNAseq #Chondrocytes #Osteoarthritis #Cartilage #CellHeterogeneity #OAPathogenesis
doi.org/10.1016/j.ge...

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Signal Transduction and Targeted Therapy

@sigtrans-sttt.bsky.social

2 months ago

Single-cell RNA-seq reveals cell type-specific molecular and genetic associations with primary open-angle glaucoma - Signal Transduction and Targeted Therapy Signal Transduction and Targeted Therapy - Single-cell RNA-seq reveals cell type-specific molecular and genetic associations with primary open-angle glaucoma

Researchers map #SystemicImmunity in #POAG via #SingleCellRNASeq of #PBMCs, revealing increased CD4+ T cells, impaired cytolytic potential, and a dual proinflammatory/neuroprotective landscape, linking immune dysregulation to #retinal health.

#OpenAccess #STTT: doi.org/10.1038/s413...

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@arxivlens.bsky.social

2 months ago

Deciphering Tumor Microenvironment Dynamics in Tumorigenesis and Lymph Node Metastasis of Esophageal Squamous Cell Carcinoma using Single-Cell RNA Sequencing
Hong, T. H. et al.
Paper
Details
#EsophagealSquamousCellCarcinoma #SingleCellRNASeq #TumorMicroenvironment

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Novogene Europe

@novogene-europe.bsky.social

3 months ago

Explore the role of 10x single-cell RNA sequencing in uncovering cellular heterogeneity and tumor microenvironments in gallbladder cancer. Gain insights into this advanced approach.

Read more: https://bit.ly/3ZGhCoE

#SingleCellRNASeq #CancerResearch #GallbladderCancer #Transcriptomics #Innovation

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Amitabh C. Pandey

@amitabhcpandey.bsky.social

4 months ago

Excellent work by Dr. Avik Sarkar @tulanemedicine.bsky.social on one of areas of emphasis in the my lab focusing on #vascular #senescence at #AHA25. Understanding why only some vascular beds get #atherosclerosis using #singlecellRNAseq to show protective transcripts in IMA @ahascience.bsky.social

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Dr. B. Duygu Özpolat (she/her)

@biyolokum.bsky.social

6 months ago

During lab journal this Friday, we came up with this motto and promised to remind it to ourselves whenever we are using and interpreting single cell RNAseq datasets (either ours or others') #singlecellRNAseq #scRNAseq

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Novogene Europe

@novogene-europe.bsky.social

7 months ago

Explore the role of 10x single-cell RNA sequencing in uncovering cellular heterogeneity and tumor microenvironments in gallbladder cancer. Gain insights into this advanced approach.

Read more: bit.ly/3ZGhCoE

#SingleCellRNASeq #CancerResearch #GallbladderCancer #Transcriptomics #Innovation

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ecSeq Bioinformatics

@ecseq.bsky.social

7 months ago

Single-Cell RNA-Seq Data Analysis: A Practical Introduction (October 6-8 in Berlin, Germany) - Apply Now 👉 🌐 www.ecseq.com/workshops/wo... #singleCell #singleCellRNAseq #RNAseq #NGS #bioinformatics

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Journal of Machine Learning for Modeling and Computing

@jmlmc.bsky.social

7 months ago

Evaluating the Complexity of Gene Coexpression Estimation for Single-Cell Data

www.dl.begellhouse.com/journals/558...

#SingleCellRNASeq #Bioinformatics #SystemsBiology

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@arxivlens.bsky.social

8 months ago

Single-cell RNA sequencing identifies accumulation of Fcgr2b+ virtual memory like CD8 T cells with cytotoxic and inflammatory potential in aged mouse white adipose tissue
Kumar, A., O'Brien, M. et al.
Paper
Details
#AgingResearch #Immunology #SingleCellRNAseq

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Pure Science

@purescience.news

8 months ago

New tech boosts Asia-Pacific’s single-cell RNA sequencing capability Credit: Nadya Tkach/Getty Images A high-tech upgrade is allowing scientists to peer into the genetics of millions of individual cells, while achieving significant reductions in cost compared to traditional...

New tech boosts Asia-Pacific’s single-cell RNA sequencing capability #Science #TechnologyandEngineering #SingleCellRNAseq #Biotechnology #Genomics

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Cell Regeneration

@cell-regeneration.bsky.social

9 months ago

Zbtb7b is critical for pit cell differentiation

Single-cell RNA-seq & organoids map gastric epithelial differentiation. 🌟 Zbtb7b emerges as a novel regulator of pit cell fate! #Organoids #SingleCellRNAseq

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Edenhofer Lab (UIBK)

@stemcelluibk.bsky.social

10 months ago

Come check our posters at the #LifeSciencePhD meeting! We are presenting our work on #singlecellRNAseq , growth, and aging in #organoids (89, 93 and 112), and characterization of early neural #stemcells (91)

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Novogene Europe

@novogene-europe.bsky.social

10 months ago

Explore the role of 10x single-cell RNA sequencing in uncovering cellular heterogeneity and tumor microenvironments in gallbladder cancer. Gain insights into this advanced approach.

Read more: bit.ly/3ZGhCoE

#SingleCellRNASeq #CancerResearch #GallbladderCancer #Transcriptomics #Innovation

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GenomiqueENS

@genomiqueens.bsky.social

11 months ago

AsaruSim: a single-cell and spatial RNA-Seq Nanopore long-reads simulation workflow AbstractMotivation. The combination of long-read sequencing technologies like Oxford Nanopore with single-cell RNA sequencing (scRNAseq) assays enables the

For our 1st post on Bluesky, we are excited to announce the publication of our new #bioinformatics tool #Asarusim for #SingleCellRNAseq coupled with @nanoporetech.com sequencing ! 🎉 🎊
👉 article : academic.oup.com/bioinformati...
👉 GitHub : github.com/GenomiqueENS...

cc @fr-genomics.bsky.social